FFCP PHASE1:Hg19::chr19:1257358..1257393,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90007 | |EntrezGene=90007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16298 | |HGNC=16298 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=113bp_to_AK075506_5end | |association_with_transcript=113bp_to_AK075506_5end | ||
|cluster_id=chr19:1257358..1257393,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_4_at_MIDN_5end | |description=CAGE_peak_4_at_MIDN_5end | ||
|id=chr19:1257358..1257393,+ | |id=chr19:1257358..1257393,+ | ||
|ontology_enrichment_celltype=CL:0000766!6.37e-12!76;CL:0000860!2.50e-11!45;CL:0002057!4.27e-11!42;CL:0002194!9.81e-09!63;CL:0000576!9.81e-09!63;CL:0000040!9.81e-09!63;CL:0000559!9.81e-09!63;CL:0002009!2.53e-08!65;CL:0000557!6.44e-08!71;CL:0000839!1.56e-07!70 | |ontology_enrichment_celltype=CL:0000766!6.37e-12!76;CL:0000860!2.50e-11!45;CL:0002057!4.27e-11!42;CL:0002194!9.81e-09!63;CL:0000576!9.81e-09!63;CL:0000040!9.81e-09!63;CL:0000559!9.81e-09!63;CL:0002009!2.53e-08!65;CL:0000557!6.44e-08!71;CL:0000839!1.56e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-11;33!CL:0002057;1.11e-11;33!CL:0000473;8.87e-11;39!CL:0000234;8.87e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.62e-12,48;CL:0000234,3.62e-12,48;CL:0000766,2.21e-11,72;CL:0000860,4.63e-11,42;CL:0002057,4.63e-11,42;CL:0002194,3.88e-08,59;CL:0000576,3.88e-08,59;CL:0000040,3.88e-08,59;CL:0000559,3.88e-08,59;CL:0002009,9.88e-08,61;CL:0000557,2.13e-07,67;CL:0000839,4.18e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.16e-08!80;UBERON:0001474!1.81e-07!86;UBERON:0002390!2.90e-07!102;UBERON:0003061!2.90e-07!102;UBERON:0004765!8.19e-07!101;UBERON:0001434!8.19e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!2.16e-08!80;UBERON:0001474!1.81e-07!86;UBERON:0002390!2.90e-07!102;UBERON:0003061!2.90e-07!102;UBERON:0004765!8.19e-07!101;UBERON:0001434!8.19e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.14e-08,76;UBERON:0001434,2.93e-07,100;UBERON:0004765,3.09e-07,90;UBERON:0001474,6.76e-07,82;UBERON:0002390,9.63e-07,98;UBERON:0003061,9.63e-07,98 | |||
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| ||
|short_description=p4@MIDN | |short_description=p4@MIDN | ||
}} | }} |
Latest revision as of 18:38, 15 September 2015
Short description: | p4@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MIDN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 113bp_to_AK075506_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.62e-12 | 48 |
phagocyte | 3.62e-12 | 48 |
myeloid leukocyte | 2.21e-11 | 72 |
classical monocyte | 4.63e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.63e-11 | 42 |
monopoietic cell | 3.88e-08 | 59 |
monocyte | 3.88e-08 | 59 |
monoblast | 3.88e-08 | 59 |
promonocyte | 3.88e-08 | 59 |
macrophage dendritic cell progenitor | 9.88e-08 | 61 |
granulocyte monocyte progenitor cell | 2.13e-07 | 67 |
myeloid lineage restricted progenitor cell | 4.18e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.14e-08 | 76 |
skeletal system | 2.93e-07 | 100 |
skeletal element | 3.09e-07 | 90 |
bone element | 6.76e-07 | 82 |
hematopoietic system | 9.63e-07 | 98 |
blood island | 9.63e-07 | 98 |