FFCP PHASE1:Hg19::chr2:232135672..232135717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80210 | |EntrezGene=80210 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20730 | |HGNC=20730 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000428662_5end | |association_with_transcript=0bp_to_ENST00000428662_5end | ||
|cluster_id=chr2:232135672..232135717,+ | |||
|coexpression_cluster_id=C233 | |coexpression_cluster_id=C233 | ||
|description=CAGE_peak_5_at_ARMC9_5end | |description=CAGE_peak_5_at_ARMC9_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.14e-10;5 | |ontology_enrichment_celltype_v019=CL:0000333;2.14e-10;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;8.24e-09;6 | |ontology_enrichment_disease_v019=DOID:169;8.24e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,7.05e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-18!115 | |ontology_enrichment_uberon=UBERON:0007023!1.20e-18!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.61e-13;1!UBERON:0000996;5.70e-13;1!UBERON:0000013;2.14e-10;5!UBERON:0002410;2.14e-10;5!UBERON:0001255;4.04e-07;2!UBERON:0000007;4.04e-07;2!UBERON:0001556;4.04e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0006834;1.61e-13;1!UBERON:0000996;5.70e-13;1!UBERON:0000013;2.14e-10;5!UBERON:0002410;2.14e-10;5!UBERON:0001255;4.04e-07;2!UBERON:0000007;4.04e-07;2!UBERON:0001556;4.04e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.61e-13,1;UBERON:0000996,2.95e-13,1;UBERON:0007023,3.08e-13,114;UBERON:0000013,1.77e-10,5;UBERON:0002410,1.77e-10,5;UBERON:0000162,4.16e-08,14;UBERON:0001353,4.16e-08,14;UBERON:0000163,4.16e-08,14;UBERON:0006866,4.16e-08,14;UBERON:0000164,4.16e-08,14;UBERON:0000931,4.16e-08,14;UBERON:0004122,1.34e-07,15;UBERON:0000007,3.48e-07,2;UBERON:0001255,3.70e-07,2;UBERON:0001556,3.70e-07,2;UBERON:0005156,7.94e-07,59;UBERON:0000990,7.94e-07,59 | |||
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| ||
|short_description=p5@ARMC9 | |short_description=p5@ARMC9 | ||
}} | }} |
Latest revision as of 18:30, 15 September 2015
Short description: | p5@ARMC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARMC9_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000428662_5end |
EntrezGene: | ARMC9 |
HGNC: | 20730 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.61e-13 | 1 |
vagina | 2.95e-13 | 1 |
adult organism | 3.08e-13 | 114 |
sympathetic nervous system | 1.77e-10 | 5 |
autonomic nervous system | 1.77e-10 | 5 |
cloaca | 4.16e-08 | 14 |
anal region | 4.16e-08 | 14 |
embryonic cloaca | 4.16e-08 | 14 |
terminal part of digestive tract | 4.16e-08 | 14 |
primitive urogenital sinus | 4.16e-08 | 14 |
proctodeum | 4.16e-08 | 14 |
genitourinary system | 1.34e-07 | 15 |
pituitary gland | 3.48e-07 | 2 |
urinary bladder | 3.70e-07 | 2 |
lower urinary tract | 3.70e-07 | 2 |
reproductive structure | 7.94e-07 | 59 |
reproductive system | 7.94e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.05e-09 | 6 |