FFCP PHASE1:Hg19::chr20:33464344..33464363,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:33464344..33464363,+
|short_description=p3@ACSS2
|description=CAGE_peak_3_at_ACSS2_5end
|association_with_transcript=-11bp_to_ENST00000484354_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55902 | |EntrezGene=55902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15814 | |HGNC=15814 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXD9 | |UniProt=C9JXD9 | ||
|association_with_transcript=-11bp_to_ENST00000484354_5end | |||
|cluster_id=chr20:33464344..33464363,+ | |||
|description=CAGE_peak_3_at_ACSS2_5end | |||
|id=chr20:33464344..33464363,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.70e-13!365;UBERON:0003075!5.55e-13!86;UBERON:0007284!5.55e-13!86;UBERON:0002346!8.37e-13!90;UBERON:0001049!2.34e-12!57;UBERON:0005068!2.34e-12!57;UBERON:0006241!2.34e-12!57;UBERON:0007135!2.34e-12!57;UBERON:0000955!3.48e-12!69;UBERON:0006238!3.48e-12!69;UBERON:0002616!3.52e-11!59;UBERON:0005743!5.72e-11!86;UBERON:0000073!6.25e-11!94;UBERON:0001016!6.25e-11!94;UBERON:0001017!2.05e-10!82;UBERON:0000481!5.47e-10!347;UBERON:0000483!2.35e-09!309;UBERON:0000119!3.32e-09!312;UBERON:0007023!1.02e-08!115;UBERON:0000924!1.16e-08!173;UBERON:0006601!1.16e-08!173;UBERON:0000033!1.16e-08!123;UBERON:0004121!1.26e-08!169;UBERON:0003080!2.96e-08!42;UBERON:0000153!4.21e-08!129;UBERON:0007811!4.21e-08!129;UBERON:0001893!4.97e-08!34;UBERON:0002780!5.05e-08!41;UBERON:0001890!5.05e-08!41;UBERON:0006240!5.05e-08!41;UBERON:0003056!6.84e-08!61;UBERON:0002791!9.75e-08!33;UBERON:0002020!1.17e-07!34;UBERON:0003528!1.17e-07!34;UBERON:0001869!1.40e-07!32;UBERON:0000025!1.49e-07!194;UBERON:0001950!4.99e-07!20;UBERON:0002619!5.77e-07!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.85e-12,56;UBERON:0005068,5.85e-12,56;UBERON:0006241,5.85e-12,56;UBERON:0007135,5.85e-12,56;UBERON:0003075,6.81e-12,82;UBERON:0007284,6.81e-12,82;UBERON:0002346,9.81e-12,86;UBERON:0000955,1.34e-11,68;UBERON:0006238,1.34e-11,68;UBERON:0000073,2.99e-11,53;UBERON:0002616,2.99e-11,53;UBERON:0010314,6.96e-11,132;UBERON:0001017,5.36e-10,81;UBERON:0001016,1.99e-09,89;UBERON:0010371,2.04e-09,104;UBERON:0007023,1.27e-08,114;UBERON:0000483,2.92e-08,306;UBERON:0003056,3.28e-08,61;UBERON:0000119,5.34e-08,309;UBERON:0001893,7.77e-08,34;UBERON:0002780,9.56e-08,41;UBERON:0001890,9.56e-08,41;UBERON:0003080,9.56e-08,41;UBERON:0006240,9.56e-08,41;UBERON:0003528,1.83e-07,34;UBERON:0002020,1.83e-07,34;UBERON:0001869,2.27e-07,32;UBERON:0000025,2.40e-07,192;UBERON:0004121,3.38e-07,171;UBERON:0000924,3.38e-07,171;UBERON:0006601,3.38e-07,171;UBERON:0002791,3.85e-07,32;UBERON:0001950,5.66e-07,20 | |||
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| ||
|short_description=p3@ACSS2 | |||
}} | }} |
Latest revision as of 18:30, 15 September 2015
Short description: | p3@ACSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACSS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000484354_5end |
EntrezGene: | ACSS2 |
HGNC: | 15814 |
UniProt: | C9JXD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.85e-12 | 56 |
neural rod | 5.85e-12 | 56 |
future spinal cord | 5.85e-12 | 56 |
neural keel | 5.85e-12 | 56 |
neural plate | 6.81e-12 | 82 |
presumptive neural plate | 6.81e-12 | 82 |
neurectoderm | 9.81e-12 | 86 |
brain | 1.34e-11 | 68 |
future brain | 1.34e-11 | 68 |
regional part of nervous system | 2.99e-11 | 53 |
regional part of brain | 2.99e-11 | 53 |
structure with developmental contribution from neural crest | 6.96e-11 | 132 |
central nervous system | 5.36e-10 | 81 |
nervous system | 1.99e-09 | 89 |
ecto-epithelium | 2.04e-09 | 104 |
adult organism | 1.27e-08 | 114 |
epithelium | 2.92e-08 | 306 |
pre-chordal neural plate | 3.28e-08 | 61 |
cell layer | 5.34e-08 | 309 |
telencephalon | 7.77e-08 | 34 |
regional part of forebrain | 9.56e-08 | 41 |
forebrain | 9.56e-08 | 41 |
anterior neural tube | 9.56e-08 | 41 |
future forebrain | 9.56e-08 | 41 |
brain grey matter | 1.83e-07 | 34 |
gray matter | 1.83e-07 | 34 |
cerebral hemisphere | 2.27e-07 | 32 |
tube | 2.40e-07 | 192 |
ectoderm-derived structure | 3.38e-07 | 171 |
ectoderm | 3.38e-07 | 171 |
presumptive ectoderm | 3.38e-07 | 171 |
regional part of telencephalon | 3.85e-07 | 32 |
neocortex | 5.66e-07 | 20 |