FFCP PHASE1:Hg19::chr17:46919009..46919024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10241 | |EntrezGene=10241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29912 | |HGNC=29912 | ||
|TSSclassifier=strong | |||
|UniProt=D6RF70 | |UniProt=D6RF70 | ||
|association_with_transcript=84bp_to_ENST00000502761_5end | |association_with_transcript=84bp_to_ENST00000502761_5end | ||
|cluster_id=chr17:46919009..46919024,+ | |||
|coexpression_cluster_id=C3649 | |||
|description=CAGE_peak_8_at_CALCOCO2_5end | |description=CAGE_peak_8_at_CALCOCO2_5end | ||
|id=chr17:46919009..46919024,+ | |id=chr17:46919009..46919024,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.04e-20;13!CL:0002615;5.21e-14;3!CL:0002580;3.57e-13;3!CL:0002617;2.52e-10;2!CL:0000746;9.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.49e-17,15;CL:0002615,5.37e-14,3;CL:0002580,7.99e-13,3;CL:0002617,2.42e-10,2;CL:0000746,8.76e-07,3;CL:0000513,8.76e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;9.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-36!115;UBERON:0002616!5.96e-12!59;UBERON:0003075!7.56e-12!86;UBERON:0007284!7.56e-12!86;UBERON:0005743!1.40e-11!86;UBERON:0002346!9.17e-11!90;UBERON:0000073!3.86e-10!94;UBERON:0001016!3.86e-10!94;UBERON:0000955!4.94e-10!69;UBERON:0006238!4.94e-10!69;UBERON:0001049!6.33e-10!57;UBERON:0005068!6.33e-10!57;UBERON:0006241!6.33e-10!57;UBERON:0007135!6.33e-10!57;UBERON:0001017!2.11e-09!82;UBERON:0002298!1.09e-08!8;UBERON:0000153!3.84e-08!129;UBERON:0007811!3.84e-08!129;UBERON:0000033!1.03e-07!123;UBERON:0000477!2.55e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.98e-15;10!UBERON:0001443;5.71e-14;11!UBERON:0001896;3.57e-13;3!UBERON:0005290;3.57e-13;3!UBERON:0003688;6.52e-12;6!UBERON:0002358;6.52e-12;6!UBERON:0003684;6.52e-12;6!UBERON:0001178;6.52e-12;6!UBERON:0004457;5.84e-08;9!UBERON:0000042;5.84e-08;9!UBERON:0007100;1.18e-07;25!UBERON:0003978;5.64e-07;3!UBERON:0000946;5.64e-07;3!UBERON:0002298;8.20e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.15e-15,10;UBERON:0001443,8.68e-14,11;UBERON:0007023,3.18e-13,114;UBERON:0001896,6.48e-13,3;UBERON:0005290,6.48e-13,3;UBERON:0010096,6.48e-13,3;UBERON:0003688,6.65e-12,6;UBERON:0002358,6.65e-12,6;UBERON:0003684,6.65e-12,6;UBERON:0001178,6.65e-12,6;UBERON:0007100,5.13e-07,27;UBERON:0003978,5.49e-07,3;UBERON:0009751,5.49e-07,3;UBERON:0000946,5.49e-07,3;UBERON:0002523,5.49e-07,3;UBERON:0005983,5.49e-07,3;UBERON:0002165,5.49e-07,3;UBERON:0002062,5.49e-07,3;UBERON:0007280,5.49e-07,3;UBERON:0000966,6.69e-07,6;UBERON:0005388,6.69e-07,6;UBERON:0001802,6.69e-07,6 | |||
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| ||
|short_description=p8@CALCOCO2 | |short_description=p8@CALCOCO2 | ||
}} | }} |
Latest revision as of 18:20, 15 September 2015
Short description: | p8@CALCOCO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CALCOCO2_5end |
Coexpression cluster: | C3649_vagina_Adipocyte_adipose_breast_skeletal_heart_Retinal |
Association with transcript: | 84bp_to_ENST00000502761_5end |
EntrezGene: | CALCOCO2 |
HGNC: | 29912 |
UniProt: | D6RF70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.49e-17 | 15 |
adipocyte of omentum tissue | 5.37e-14 | 3 |
preadipocyte of the breast | 7.99e-13 | 3 |
adipocyte of breast | 2.42e-10 | 2 |
cardiac muscle cell | 8.76e-07 | 3 |
cardiac muscle myoblast | 8.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 3.15e-15 | 10 |
chest | 8.68e-14 | 11 |
adult organism | 3.18e-13 | 114 |
medulla oblongata | 6.48e-13 | 3 |
myelencephalon | 6.48e-13 | 3 |
future myelencephalon | 6.48e-13 | 3 |
omentum | 6.65e-12 | 6 |
peritoneum | 6.65e-12 | 6 |
abdominal cavity | 6.65e-12 | 6 |
visceral peritoneum | 6.65e-12 | 6 |
primary circulatory organ | 5.13e-07 | 27 |
valve | 5.49e-07 | 3 |
cardiac mesenchyme | 5.49e-07 | 3 |
cardial valve | 5.49e-07 | 3 |
tunica intima | 5.49e-07 | 3 |
heart layer | 5.49e-07 | 3 |
endocardium | 5.49e-07 | 3 |
endocardial cushion | 5.49e-07 | 3 |
presumptive endocardium | 5.49e-07 | 3 |
retina | 6.69e-07 | 6 |
photoreceptor array | 6.69e-07 | 6 |
posterior segment of eyeball | 6.69e-07 | 6 |