FFCP PHASE1:Hg19::chr19:1249729..1249741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90007 | |EntrezGene=90007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16298 | |HGNC=16298 | ||
|TSSclassifier=strong | |||
|UniProt=Q504T8 | |UniProt=Q504T8 | ||
|association_with_transcript=-145bp_to_BC060848,BC094778_5end | |association_with_transcript=-145bp_to_BC060848,BC094778_5end | ||
|cluster_id=chr19:1249729..1249741,+ | |||
|description=CAGE_peak_19_at_MIDN_5end | |description=CAGE_peak_19_at_MIDN_5end | ||
|id=chr19:1249729..1249741,+ | |id=chr19:1249729..1249741,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;1.82e-11;2!CL:0000575;3.02e-11;2!CL:0002231;6.34e-08;3 | |ontology_enrichment_celltype_v019=CL:0002363;1.82e-11;2!CL:0000575;3.02e-11;2!CL:0002231;6.34e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.82e-11,2;CL:0000008,1.82e-11,2;CL:0000575,4.09e-11,2;CL:0002231,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;4.22e-21;1!UBERON:0009117;1.83e-18;10!UBERON:0005564;1.83e-18;10!CL:0000008;1.82e-11;2 | |ontology_enrichment_development_v019=UBERON:0010226;4.22e-21;1!UBERON:0009117;1.83e-18;10!UBERON:0005564;1.83e-18;10!CL:0000008;1.82e-11;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.92e-23;8!UBERON:0002084;4.22e-21;1!UBERON:0002082;4.22e-21;1!UBERON:0000964;5.72e-21;4!UBERON:0010409;5.72e-21;4!UBERON:0003135;7.48e-17;11!UBERON:0003101;8.88e-15;22!UBERON:0000079;8.88e-15;22!UBERON:0003566;1.82e-11;2!UBERON:0001777;1.82e-11;2!UBERON:0000991;3.85e-09;21!UBERON:0010313;5.57e-09;10!UBERON:0004151;6.34e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.92e-23;8!UBERON:0002084;4.22e-21;1!UBERON:0002082;4.22e-21;1!UBERON:0000964;5.72e-21;4!UBERON:0010409;5.72e-21;4!UBERON:0003135;7.48e-17;11!UBERON:0003101;8.88e-15;22!UBERON:0000079;8.88e-15;22!UBERON:0003566;1.82e-11;2!UBERON:0001777;1.82e-11;2!UBERON:0000991;3.85e-09;21!UBERON:0010313;5.57e-09;10!UBERON:0004151;6.34e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.43e-23,8;UBERON:0002084,4.22e-21,1;UBERON:0002082,4.22e-21,1;UBERON:0010226,4.22e-21,1;UBERON:0000964,7.74e-21,4;UBERON:0010409,7.74e-21,4;UBERON:0004348,7.74e-21,4;UBERON:0005427,7.74e-21,4;UBERON:0003135,7.09e-17,11;UBERON:0003101,8.89e-15,22;UBERON:0000079,8.89e-15,22;UBERON:0003566,1.82e-11,2;UBERON:0001777,1.82e-11,2;UBERON:0000991,3.75e-09,21;UBERON:0009196,3.75e-09,21;UBERON:0009117,3.75e-09,21;UBERON:0005564,3.75e-09,21;UBERON:0010313,6.28e-09,10;UBERON:0002342,6.28e-09,10;UBERON:0005062,6.28e-09,10;UBERON:0004176,9.18e-09,22;UBERON:0004151,6.34e-08,3 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0.217010870715852,0.447830948479849,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0.263504357079378,0.327447688744282,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0,0,1.68203280042692,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0.573609190778008,0.121973706129595,0.662648841607426,0.464775771478074,0.207322110030741,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,2.07986957055916,0,0.231860809950154,0,0.144366447761074,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0.176096868026452,0.414656231081544,0.432359860250884,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0.686286847621712,0,0.215714200818617,0.320182673410333,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0,1.19705285616665,0.229628896329213,0.182091168006717,0,0.451199612907412,0.231046011313244,0,0,0.316654886678627,0,0,0.431831832204279,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0.495854746082934,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0,0.384888450902048,0,0,0.470719003883896,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.456469358066384,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0,0,0,0,0.331737779793674,0,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0.638002319463839,0.274792780205587,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,0.489698424477443,0,0,0.995261931078505,0,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.19351266257817,0.292357268344742,0.164230914106418,0.193978032976839,0,0.451961481561065,0,0.19871461170299,0.189932387867636,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.114536596165916,0.343189995723929,0.288109595976299,0.124252535565433,0.235694034616795,0,0,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0,0,0,0.236349546921671,0.247247575143499,0.13480708770837,0,0,0.795229689809303,0.136203406111576,0.803765742325096,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.262272940674991,0.105600336519406,0,0.383830394638891,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0.704815022316672,0.213574825135389,0.157204305099666,0,0.496166021811951,0.197611631897944,0,0,0,0.2506898940227,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0.0620964029413835,0,0.124980407962107,0,0.285465333544967,0,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0.159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| ||
|short_description=p19@MIDN | |short_description=p19@MIDN | ||
}} | }} |
Latest revision as of 17:59, 15 September 2015
Short description: | p19@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_MIDN_5end |
Coexpression cluster: | NA |
Association with transcript: | -145bp_to_BC060848, BC094778_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | Q504T8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.82e-11 | 2 |
migratory cranial neural crest cell | 1.82e-11 | 2 |
corneal epithelial cell | 4.09e-11 | 2 |
epithelial cell of prostate | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 6.43e-23 | 8 |
heart left ventricle | 4.22e-21 | 1 |
cardiac ventricle | 4.22e-21 | 1 |
future cardiac ventricle | 4.22e-21 | 1 |
cornea | 7.74e-21 | 4 |
eye surface | 7.74e-21 | 4 |
optic eminence | 7.74e-21 | 4 |
corneal primordium | 7.74e-21 | 4 |
male reproductive organ | 7.09e-17 | 11 |
male organism | 8.89e-15 | 22 |
male reproductive system | 8.89e-15 | 22 |
head connective tissue | 1.82e-11 | 2 |
substantia propria of cornea | 1.82e-11 | 2 |
gonad | 3.75e-09 | 21 |
indifferent external genitalia | 3.75e-09 | 21 |
indifferent gonad | 3.75e-09 | 21 |
gonad primordium | 3.75e-09 | 21 |
neural crest-derived structure | 6.28e-09 | 10 |
neural crest | 6.28e-09 | 10 |
neural fold | 6.28e-09 | 10 |
external genitalia | 9.18e-09 | 22 |
cardiac chamber | 6.34e-08 | 3 |