FFCP PHASE1:Hg19::chr12:89919965..89919978,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100528030 | |EntrezGene=100528030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=42957 | |HGNC=42957 | ||
|TSSclassifier=strong | |||
|UniProt=F8VUJ3 | |UniProt=F8VUJ3 | ||
|association_with_transcript=0bp_to_ENST00000548729_5end | |association_with_transcript=0bp_to_ENST00000548729_5end | ||
|cluster_id=chr12:89919965..89919978,- | |||
|description=CAGE_peak_1_at_POC1B-GALNT4_5end | |description=CAGE_peak_1_at_POC1B-GALNT4_5end | ||
|id=chr12:89919965..89919978,- | |id=chr12:89919965..89919978,- | ||
|ontology_enrichment_celltype=CL:0000738!5.59e-17!140;CL:0000037!2.75e-15!172;CL:0000566!2.75e-15!172;CL:0002031!7.62e-15!124;CL:0002087!3.96e-13!119;CL:0002032!8.54e-13!165;CL:0000837!8.54e-13!165;CL:0000988!3.09e-12!182;CL:0000557!9.27e-09!71;CL:0000766!2.90e-08!76;CL:0000839!2.96e-08!70;CL:0002057!3.16e-08!42;CL:0000860!8.07e-08!45;CL:0002009!3.54e-07!65;CL:0000763!4.45e-07!112;CL:0000049!4.45e-07!112 | |ontology_enrichment_celltype=CL:0000738!5.59e-17!140;CL:0000037!2.75e-15!172;CL:0000566!2.75e-15!172;CL:0002031!7.62e-15!124;CL:0002087!3.96e-13!119;CL:0002032!8.54e-13!165;CL:0000837!8.54e-13!165;CL:0000988!3.09e-12!182;CL:0000557!9.27e-09!71;CL:0000766!2.90e-08!76;CL:0000839!2.96e-08!70;CL:0002057!3.16e-08!42;CL:0000860!8.07e-08!45;CL:0002009!3.54e-07!65;CL:0000763!4.45e-07!112;CL:0000049!4.45e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000624;5.30e-13;6!CL:0000784;1.39e-10;3!CL:0000791;4.18e-10;18!CL:0000789;4.18e-10;18!CL:0002419;4.18e-10;18!CL:0002393;1.47e-08;6!CL:0002397;1.47e-08;6!CL:0000084;7.13e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.31e-19,136;CL:0002031,5.86e-16,120;CL:0000037,2.59e-15,168;CL:0000988,4.54e-14,177;CL:0002087,2.80e-13,115;CL:0000624,3.63e-13,6;CL:0002032,5.28e-13,161;CL:0000837,5.28e-13,161;CL:0000784,1.00e-10,3;CL:0000791,3.57e-10,18;CL:0000789,3.57e-10,18;CL:0002420,3.57e-10,18;CL:0002419,3.57e-10,18;CL:0000790,3.57e-10,18;CL:0000557,1.31e-09,67;CL:0000766,1.03e-08,72;CL:0000838,1.27e-08,52;CL:0000542,2.12e-08,53;CL:0000051,2.12e-08,53;CL:0000860,1.70e-07,42;CL:0002057,1.70e-07,42;CL:0000839,2.25e-07,66;CL:0000084,6.41e-07,25;CL:0000827,6.41e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;4.18e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.90e-07!86;UBERON:0002390!3.19e-07!102;UBERON:0003061!3.19e-07!102;UBERON:0002371!3.23e-07!80 | |ontology_enrichment_uberon=UBERON:0001474!1.90e-07!86;UBERON:0002390!3.19e-07!102;UBERON:0003061!3.19e-07!102;UBERON:0002371!3.23e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.21e-09,98;UBERON:0003061,9.21e-09,98;UBERON:0001474,3.31e-08,82;UBERON:0002371,5.27e-08,76;UBERON:0002193,1.68e-07,108;UBERON:0004765,4.11e-07,90;UBERON:0002405,9.80e-07,93 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.152826811495903,0.164201178899891,0.157421562627358,0.786728553697808,3.0706351847777,0.309632246632152,0,1.204823675113,0.369754010166788,0.154934401160603,0.142169232487422,0.587200878669695,2.21598163412751,2.4065333696417,2.60413044859022,0.447830948479849,0.32389366601898,0.515151135268373,0.436194716338694,0,0.727752183563449,0.232429036905685,0.822335776043652,1.85823822537062,1.1507695692886,0.768482119587302,0,0.689491361473237,1.93645405075148,1.35426486594342,0,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0.659702600373432,0.398927315243264,0.852449501065388,0.290209238628584,0,0.622822248995575,2.51248665256743,1.0429658368404,1.08594422352558,0,0.368277635987565,0,0,0.637812899895131,1.04829322754188,0.673971786878971,1.05123824989054,0.64290234678832,0.285012743741249,0.19891667719909,0,0,0.546138611262131,1.77901850772711,0,0.800791974072025,0.574752439954483,0.661044872784862,0,3.98449078376614,2.34894875748376,2.29363936875137,1.32171328579026,2.80254281490768,0,3.73748563216283,3.14408610199332,1.85041349099558,0.334372990781356,0.977766799900771,4.2610302516126,5.84480185223734,1.11410456885174,1.17842362989935,2.21533894583621,1.35401931882508,0.896639238079726,1.1705341280389,1.64437904603676,1.38175008892924,0.289803085735052,1.92772532110679,1.60524496853828,2.09071047609954,1.24640276967323,2.68254345521345,3.4362744548263,2.02415753615602,0.318565414324097,0,0.950452044448374,0.301150238155546,0.895906278080929,0,0.236777252044017,0,2.62088766192152,3.20928234940209,3.04131248153878,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.327447688744282,0.364295288292542,0,0,0,0.132957960518865,2.62339686735876,4.57595928624102,2.97166001063652,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.357198913136319,0.673588117878509,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,0,0,0.490385709340376,0.151357427644931,0,0.468642863667593,0,0,0.448346041655403,0.23486899728753,0.323745888736263,0.280901613404497,0.204154171254893,0,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.184099797284599,0.323292113637624,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0.34779121492523,0,0.144366447761074,0,0.380508304469197,0,0,0.492434012174795,0,0.297262324577456,0,0.335964256397719,0.283550194484773,0.268675568108545,0.581267877027924,0.383382679165211,0.492663237895943,0,1.4512968087854,1.00883967391873,1.13618190083742,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0.710783897485092,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0.394061520403854,1.07813787429759,2.43851768931522,0,1.30139853857622,0,0,0.637938751653163,0,2.99161459204025,0.828831026872071,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.647142602455851,1.17400313583789,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.483437798366489,0.200506470303285,0.644566922551274,0,0.728364672026868,0.131124414959424,0.451199612907412,0.308061348417659,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.877039506583738,0.784306353074702,0,0,0,0,0.27470839445503,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0.384888450902048,0,0,0.0941438007767792,0,0,0,0.229723400206959,1.01489521846434,0,0,0,0.822724546172388,0,1.08006287447623,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0.426851060090485,0.159426272728822,0.199579371432817,0.191505370132367,0.846694330895531,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.677167111206413,0,0,0.851692475380653,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0.835218521685727,0,0,0,0,1.30998378285754,0.439524537815682,1.21360521749513,0.222886768554957,0,0.47748896947538,0,0,0,0,0.222617410045812,0.16480387422676,0,0,0.5525678310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| ||
|short_description=p1@POC1B-GALNT4 | |short_description=p1@POC1B-GALNT4 | ||
}} | }} |
Latest revision as of 17:51, 15 September 2015
Short description: | p1@POC1B-GALNT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POC1B-GALNT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000548729_5end |
EntrezGene: | POC1B-GALNT4 |
HGNC: | 42957 |
UniProt: | F8VUJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.31e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 5.86e-16 | 120 |
hematopoietic stem cell | 2.59e-15 | 168 |
hematopoietic cell | 4.54e-14 | 177 |
nongranular leukocyte | 2.80e-13 | 115 |
CD4-positive, alpha-beta T cell | 3.63e-13 | 6 |
hematopoietic oligopotent progenitor cell | 5.28e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.28e-13 | 161 |
plasmacytoid dendritic cell | 1.00e-10 | 3 |
mature alpha-beta T cell | 3.57e-10 | 18 |
alpha-beta T cell | 3.57e-10 | 18 |
immature T cell | 3.57e-10 | 18 |
mature T cell | 3.57e-10 | 18 |
immature alpha-beta T cell | 3.57e-10 | 18 |
granulocyte monocyte progenitor cell | 1.31e-09 | 67 |
myeloid leukocyte | 1.03e-08 | 72 |
lymphoid lineage restricted progenitor cell | 1.27e-08 | 52 |
lymphocyte | 2.12e-08 | 53 |
common lymphoid progenitor | 2.12e-08 | 53 |
classical monocyte | 1.70e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.70e-07 | 42 |
myeloid lineage restricted progenitor cell | 2.25e-07 | 66 |
T cell | 6.41e-07 | 25 |
pro-T cell | 6.41e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.21e-09 | 98 |
blood island | 9.21e-09 | 98 |
bone element | 3.31e-08 | 82 |
bone marrow | 5.27e-08 | 76 |
hemolymphoid system | 1.68e-07 | 108 |
skeletal element | 4.11e-07 | 90 |
immune system | 9.80e-07 | 93 |