FFCP PHASE1:Hg19::chr17:46806373..46806386,-: Difference between revisions
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|id=chr17:46806373..46806386,-
|short_description=p6@HOXB13
|description=CAGE_peak_6_at_HOXB13_5end
|association_with_transcript=153bp_to_ENST00000290295_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10481 | |EntrezGene=10481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5112 | |HGNC=5112 | ||
|TSSclassifier=strong | |||
|UniProt=Q92826 | |UniProt=Q92826 | ||
|association_with_transcript=153bp_to_ENST00000290295_5end | |||
|cluster_id=chr17:46806373..46806386,- | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_6_at_HOXB13_5end | |||
|id=chr17:46806373..46806386,- | |||
|ontology_enrichment_celltype=CL:0000039!1.37e-09!7;CL:0000586!1.37e-09!7;CL:0000148!8.97e-07!10;CL:0000541!8.97e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000306;8.85e-07;4!CL:0002222;8.85e-07;4!CL:0002224;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.13e-30;3!UBERON:0003353;2.13e-30;3!UBERON:0005425;3.67e-23;1!UBERON:0003056;1.26e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!5.90e-17!22;DOID:2994!5.90e-17!22;DOID:171!1.40e-14!10;DOID:0050687!7.63e-12!143;DOID:162!3.56e-10!235;DOID:14566!8.17e-10!239;DOID:1115!3.13e-09!20;DOID:3093!4.24e-08!11 | |||
|ontology_enrichment_disease_v019=DOID:3193;1.85e-12;2!DOID:962;1.85e-12;2!DOID:1192;9.66e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,1.85e-12,2;DOID:962,1.85e-12,2;DOID:1192,9.66e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0003714!6.02e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;8.74e-45;2!UBERON:0000941;3.67e-23;1!UBERON:0001785;3.67e-23;1!UBERON:0002464;3.67e-23;1!UBERON:0004904;3.67e-23;1!UBERON:0001021;3.67e-23;1!UBERON:0005162;2.74e-12;2!UBERON:0000122;2.74e-12;2!UBERON:0000010;8.57e-11;8!UBERON:0002367;4.90e-09;11!UBERON:0010147;4.90e-09;11!UBERON:0003937;2.33e-08;12!UBERON:0005399;2.33e-08;12!UBERON:0010077;8.85e-07;4!UBERON:0005389;8.85e-07;4!UBERON:0000484;8.85e-07;4!UBERON:0000965;8.85e-07;4!UBERON:0001803;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.83e-45,2;UBERON:0000941,3.28e-23,1;UBERON:0001785,3.28e-23,1;UBERON:0002464,3.28e-23,1;UBERON:0004904,3.28e-23,1;UBERON:0001021,3.28e-23,1;UBERON:0003902,3.28e-23,1;UBERON:0005425,3.28e-23,1;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0000010,8.37e-11,8;UBERON:0002367,4.61e-09,11;UBERON:0010147,4.61e-09,11;UBERON:0009846,4.61e-09,11;UBERON:0003353,4.61e-09,11;UBERON:0004902,4.61e-09,11;UBERON:0003820,4.61e-09,11;UBERON:0009847,4.61e-09,11;UBERON:0003937,2.20e-08,12;UBERON:0005399,2.20e-08,12;UBERON:0000162,2.60e-07,14;UBERON:0001353,2.60e-07,14;UBERON:0000163,2.60e-07,14;UBERON:0006866,2.60e-07,14;UBERON:0000164,2.60e-07,14;UBERON:0000931,2.60e-07,14;UBERON:0004122,6.99e-07,15;UBERON:0001781,8.61e-07,4;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4 | |||
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| ||
|short_description=p6@HOXB13 | |||
}} | }} |
Latest revision as of 17:44, 15 September 2015
Short description: | p6@HOXB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOXB13_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | 153bp_to_ENST00000290295_5end |
EntrezGene: | HOXB13 |
HGNC: | 5112 |
UniProt: | Q92826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.85e-12 | 2 |
neurofibroma | 1.85e-12 | 2 |
peripheral nervous system neoplasm | 9.66e-09 | 3 |