FFCP PHASE1:Mm9::chrX:98579969..98579982,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:98579969..98579982,+
|short_description=p@chrX:98579969..98579982,+
|description=CAGE_peak_at_chrX:98579969..98579982,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=111 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:98579969..98579982,+ | |||
|description=CAGE_peak_at_chrX:98579969..98579982,+ | |||
|id=chrX:98579969..98579982,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.75e-09!5;CL:0000417!5.75e-09!5;CL:0000668!5.75e-09!5;CL:0000412!5.75e-09!5;CL:0000182!5.75e-09!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-35,5;CL:0000223,3.28e-09,20;CL:0000066,1.94e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.35e-26!22;UBERON:0007499!2.35e-26!22;UBERON:0006925!2.35e-26!22;UBERON:0009497!2.35e-26!22;UBERON:0000015!2.35e-26!22;UBERON:0002423!2.35e-26!22;UBERON:0006235!2.35e-26!22;UBERON:0008835!2.35e-26!22;UBERON:0003894!2.35e-26!22;UBERON:0004161!2.35e-26!22;UBERON:0008836!2.35e-26!22;UBERON:0002365!7.71e-26!25;UBERON:0002330!7.71e-26!25;UBERON:0009854!4.93e-25!23;UBERON:0009856!4.93e-25!23;UBERON:0005172!2.51e-12!49;UBERON:0005173!2.51e-12!49;UBERON:0002417!2.51e-12!49;UBERON:0000916!2.51e-12!49;UBERON:0005256!1.33e-11!47;UBERON:0003929!9.95e-11!55;UBERON:0003914!3.05e-10!47;UBERON:0000490!2.85e-09!66;UBERON:0005057!3.84e-09!51;UBERON:0009569!4.65e-08!66;UBERON:0005911!1.08e-07!69;UBERON:0002530!2.13e-07!65;UBERON:0002368!3.23e-07!60;UBERON:0000466!4.84e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-24,22;UBERON:0007499,1.90e-24,22;UBERON:0006925,1.90e-24,22;UBERON:0009497,1.90e-24,22;UBERON:0000015,1.90e-24,22;UBERON:0002423,1.90e-24,22;UBERON:0006235,1.90e-24,22;UBERON:0008835,1.90e-24,22;UBERON:0003894,1.90e-24,22;UBERON:0004161,1.90e-24,22;UBERON:0008836,1.90e-24,22;UBERON:0009854,2.17e-23,23;UBERON:0009856,2.17e-23,23;UBERON:0002365,1.57e-21,25;UBERON:0002330,1.57e-21,25;UBERON:0005256,5.49e-12,45;UBERON:0003914,1.78e-11,47;UBERON:0005172,5.25e-11,49;UBERON:0005173,5.25e-11,49;UBERON:0002417,5.25e-11,49;UBERON:0000916,5.25e-11,49;UBERON:0003929,8.45e-10,55;UBERON:0002368,5.62e-09,60;UBERON:0003104,7.92e-09,61;UBERON:0009142,7.92e-09,61;UBERON:0002530,2.81e-08,65;UBERON:0000490,3.76e-08,66;UBERON:0009569,3.76e-08,66;UBERON:0005911,8.62e-08,69;UBERON:0000949,1.85e-07,72;UBERON:0005177,8.74e-07,79 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,5.439770669662,2.69851595818909,3.89865850468601,3.13618820968135,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0.482354319504834,0.25462585178142,0.287696137450811,5.67473293712624,0,1.43768206527355,0.744281895337007,0.624075346229121,0,0.538192240565737,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,5.439770669662,2.69851595818909,3.89865850468601,3.13618820968135,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0.482354319504834,0.25462585178142,0.287696137450811,5.67473293712624,0,1.43768206527355,0.744281895337007,0.624075346229121,0,0.538192240565737,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chrX:98579969..98579982,+ | |||
}} | }} |
Latest revision as of 11:09, 6 August 2015
Short description: | p@chrX:98579969..98579982, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:98579969..98579982, + |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.40e-35 | 5 |
endodermal cell | 3.28e-09 | 20 |
epithelial cell | 1.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 1.90e-24 | 22 |
epithelial sac | 1.90e-24 | 22 |
digestive gland | 1.90e-24 | 22 |
epithelium of foregut-midgut junction | 1.90e-24 | 22 |
anatomical boundary | 1.90e-24 | 22 |
hepatobiliary system | 1.90e-24 | 22 |
foregut-midgut junction | 1.90e-24 | 22 |
hepatic diverticulum | 1.90e-24 | 22 |
liver primordium | 1.90e-24 | 22 |
septum transversum | 1.90e-24 | 22 |
liver bud | 1.90e-24 | 22 |
digestive tract diverticulum | 2.17e-23 | 23 |
sac | 2.17e-23 | 23 |
exocrine gland | 1.57e-21 | 25 |
exocrine system | 1.57e-21 | 25 |
trunk mesenchyme | 5.49e-12 | 45 |
epithelial tube | 1.78e-11 | 47 |
abdomen element | 5.25e-11 | 49 |
abdominal segment element | 5.25e-11 | 49 |
abdominal segment of trunk | 5.25e-11 | 49 |
abdomen | 5.25e-11 | 49 |
gut epithelium | 8.45e-10 | 55 |
endocrine gland | 5.62e-09 | 60 |
mesenchyme | 7.92e-09 | 61 |
entire embryonic mesenchyme | 7.92e-09 | 61 |
gland | 2.81e-08 | 65 |
unilaminar epithelium | 3.76e-08 | 66 |
subdivision of trunk | 3.76e-08 | 66 |
endo-epithelium | 8.62e-08 | 69 |
endocrine system | 1.85e-07 | 72 |
trunk region element | 8.74e-07 | 79 |