FFCP PHASE1:Mm9::chr11:69476127..69476138,-: Difference between revisions
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{{FFCP|EntrezGene=24070|HGNC=|MCL_coexpression_id=208|UniProt=Q8R0J2|association_with_transcript=5bp_to_ENSMUST00000018905,NM_011900,uc007jqv.1,uc007jqw.1_5end|description=CAGE_peak_2_at_Mpdu1_5end|id=chr11:69476127..69476138,-|ontology_enrichment_celltype=CL:0000117!1.35e-13!23;CL:0000337!1.35e-13!23;CL:0000221!3.61e-13!44;CL:0000133!3.61e-13!44;CL:0002319!4.44e-13!43;CL:0000540!1.05e-10!33;CL:0000047!1.05e-10!33;CL:0000031!1.05e-10!33;CL:0000404!1.05e-10!33;CL:0000055!2.86e-10!50;CL:0000393!1.18e-08!39;CL:0000211!1.18e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.60e-20,23;CL:0000337,5.60e-20,23;CL:0002319,1.42e-18,43;CL:0000221,6.89e-18,44;CL:0000133,6.89e-18,44;CL:0000540,1.50e-17,33;CL:0000047,1.50e-17,33;CL:0000031,1.50e-17,33;CL:0000404,1.50e-17,33;CL:0000393,2.20e-13,39;CL:0000211,2.20e-13,39;CL:0002321,6.68e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.03e-22!73;UBERON:0005743!1.03e-22!73;UBERON:0000073!1.09e-22!75;UBERON:0001016!1.09e-22!75;UBERON:0004121!1.68e-20!102;UBERON:0000924!1.68e-20!102;UBERON:0006601!1.68e-20!102;UBERON:0002346!6.62e-20!71;UBERON:0003075!6.62e-20!71;UBERON:0007284!6.62e-20!71;UBERON:0000033!8.60e-19!63;UBERON:0001049!1.34e-18!52;UBERON:0005068!1.34e-18!52;UBERON:0006241!1.34e-18!52;UBERON:0007135!1.34e-18!52;UBERON:0000955!7.03e-18!50;UBERON:0006238!7.03e-18!50;UBERON:0002616!2.36e-17!49;UBERON:0002020!1.52e-14!34;UBERON:0003056!1.01e-13!49;UBERON:0003080!1.52e-12!40;UBERON:0002791!4.36e-12!29;UBERON:0003528!4.36e-12!29;UBERON:0001893!4.36e-12!29;UBERON:0002780!6.00e-12!39;UBERON:0001890!6.00e-12!39;UBERON:0006240!6.00e-12!39;UBERON:0007811!6.14e-08!86;UBERON:0000956!1.50e-07!21;UBERON:0001869!1.50e-07!21;UBERON:0000203!1.50e-07!21;UBERON:0003076!4.41e-07!12;UBERON:0003057!4.41e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.92e-32,73;UBERON:0001016,4.70e-31,75;UBERON:0000073,2.29e-26,54;UBERON:0004121,6.02e-26,95;UBERON:0000924,6.02e-26,95;UBERON:0006601,6.02e-26,95;UBERON:0002346,4.46e-25,64;UBERON:0003075,4.46e-25,64;UBERON:0007284,4.46e-25,64;UBERON:0001049,3.05e-24,52;UBERON:0005068,3.05e-24,52;UBERON:0006241,3.05e-24,52;UBERON:0007135,3.05e-24,52;UBERON:0010371,4.15e-21,73;UBERON:0000955,4.05e-20,47;UBERON:0006238,4.05e-20,47;UBERON:0002616,2.51e-19,46;UBERON:0002020,2.98e-19,34;UBERON:0003056,3.37e-16,49;UBERON:0003080,1.27e-15,40;UBERON:0003528,2.43e-15,29;UBERON:0002791,2.43e-15,29;UBERON:0001893,2.43e-15,29;UBERON:0002780,1.02e-14,39;UBERON:0001890,1.02e-14,39;UBERON:0006240,1.02e-14,39;UBERON:0010314,3.50e-14,92;UBERON:0003076,1.27e-09,12;UBERON:0003057,1.27e-09,12;UBERON:0002420,3.99e-09,8;UBERON:0007245,3.99e-09,8;UBERON:0010009,3.99e-09,8;UBERON:0010011,3.99e-09,8;UBERON:0000454,3.99e-09,8;UBERON:0000956,2.16e-08,21;UBERON:0001869,2.16e-08,21;UBERON:0000203,2.16e-08,21;UBERON:0011216,4.66e-07,194|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0.90739263392049,0,0,0.467225281191051,0.129123323441576,0,0,0.34243593645101,0.159544317990673,0,0.262261207256992,0.333109761815663,0.607425802169478,1.39912375625629,0.157731082679119,0,0.42438965179803,1.10556277196391,0,0,1.11994695955385,0.22940928106717,0,1.29228598847722,0.215471232685889,0.570070258369122,1.26015064879965,0.665191531965914,0,0.61506478758457,0,1.1554064790051,0.664938581433969,0.204169356262369,0.418531630736908,0.7813353445238,0,1.17646297606203,0.683045484958446,0,0.125896817975577,0.608261587317087,0.734187008646726,0.782391344348039,1.52617609466313,1.31811709640683,1.55543919259427,0.699932108126813,1.43752564364972,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,3.84401275633236,4.23192783417626,4.43681982454325,1.0165335962074,2.66788438833342,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,6.91592949578798,2.59224030771194,1.08004750665353,3.57552434297349,4.57041575046086,3.09215957332259,0.979926393719632,2.58782771749238,1.83843757322004,5.50579404996943,3.57524546638526,3.68655679814984,3.56092976871523,3.38504281328916,4.16730696445408,7.53794097303729,6.19038871034848,2.90316670775939,1.17851434189467,2.42031857358475,1.67759501242771,0.832988126665025,0.604572480854284,0,0,0,0,0,0.448026887097336,1.12355536105401,0.170430322578058,0,0,0.845060518660083,0,0,0,0.432982082022428,0.506719730950197,0,0.5709193985953,0,0.742210695324124,0.693941307064543,0.304465478312141,0.922461989024234,0.753613202763113,0.587943535678524,1.13099932196708,0,0.578397427679647,0,0.485300549842228,0.220841518460394,0.484875253135222,0,4.9772735491963,5.86450779077674,1.02182822083437,0.479260498023681,0,0.254140454146129,3.89455662452539,2.74500361691176,1.7591609295801,2.08589184230732,2.81287003063364,3.32460871295296,2.27137768294861,0.916554274652847,0.124406970610093,0.252722758433675,0.631325567659422,0.910843100738926,0.919608417733892,1.62055916824814,1.05493372485001,1.7009124787832,1.40925092313335,1.96773621575431,0,0,0.1891060801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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:24070 | |||
|HGNC= | |||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R0J2 | |||
|association_with_transcript=5bp_to_ENSMUST00000018905,NM_011900,uc007jqv.1,uc007jqw.1_5end | |||
|cluster_id=chr11:69476127..69476138,- | |||
|description=CAGE_peak_2_at_Mpdu1_5end | |||
|id=chr11:69476127..69476138,- | |||
|ontology_enrichment_celltype=CL:0000117!1.35e-13!23;CL:0000337!1.35e-13!23;CL:0000221!3.61e-13!44;CL:0000133!3.61e-13!44;CL:0002319!4.44e-13!43;CL:0000540!1.05e-10!33;CL:0000047!1.05e-10!33;CL:0000031!1.05e-10!33;CL:0000404!1.05e-10!33;CL:0000055!2.86e-10!50;CL:0000393!1.18e-08!39;CL:0000211!1.18e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.60e-20,23;CL:0000337,5.60e-20,23;CL:0002319,1.42e-18,43;CL:0000221,6.89e-18,44;CL:0000133,6.89e-18,44;CL:0000540,1.50e-17,33;CL:0000047,1.50e-17,33;CL:0000031,1.50e-17,33;CL:0000404,1.50e-17,33;CL:0000393,2.20e-13,39;CL:0000211,2.20e-13,39;CL:0002321,6.68e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.03e-22!73;UBERON:0005743!1.03e-22!73;UBERON:0000073!1.09e-22!75;UBERON:0001016!1.09e-22!75;UBERON:0004121!1.68e-20!102;UBERON:0000924!1.68e-20!102;UBERON:0006601!1.68e-20!102;UBERON:0002346!6.62e-20!71;UBERON:0003075!6.62e-20!71;UBERON:0007284!6.62e-20!71;UBERON:0000033!8.60e-19!63;UBERON:0001049!1.34e-18!52;UBERON:0005068!1.34e-18!52;UBERON:0006241!1.34e-18!52;UBERON:0007135!1.34e-18!52;UBERON:0000955!7.03e-18!50;UBERON:0006238!7.03e-18!50;UBERON:0002616!2.36e-17!49;UBERON:0002020!1.52e-14!34;UBERON:0003056!1.01e-13!49;UBERON:0003080!1.52e-12!40;UBERON:0002791!4.36e-12!29;UBERON:0003528!4.36e-12!29;UBERON:0001893!4.36e-12!29;UBERON:0002780!6.00e-12!39;UBERON:0001890!6.00e-12!39;UBERON:0006240!6.00e-12!39;UBERON:0007811!6.14e-08!86;UBERON:0000956!1.50e-07!21;UBERON:0001869!1.50e-07!21;UBERON:0000203!1.50e-07!21;UBERON:0003076!4.41e-07!12;UBERON:0003057!4.41e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.92e-32,73;UBERON:0001016,4.70e-31,75;UBERON:0000073,2.29e-26,54;UBERON:0004121,6.02e-26,95;UBERON:0000924,6.02e-26,95;UBERON:0006601,6.02e-26,95;UBERON:0002346,4.46e-25,64;UBERON:0003075,4.46e-25,64;UBERON:0007284,4.46e-25,64;UBERON:0001049,3.05e-24,52;UBERON:0005068,3.05e-24,52;UBERON:0006241,3.05e-24,52;UBERON:0007135,3.05e-24,52;UBERON:0010371,4.15e-21,73;UBERON:0000955,4.05e-20,47;UBERON:0006238,4.05e-20,47;UBERON:0002616,2.51e-19,46;UBERON:0002020,2.98e-19,34;UBERON:0003056,3.37e-16,49;UBERON:0003080,1.27e-15,40;UBERON:0003528,2.43e-15,29;UBERON:0002791,2.43e-15,29;UBERON:0001893,2.43e-15,29;UBERON:0002780,1.02e-14,39;UBERON:0001890,1.02e-14,39;UBERON:0006240,1.02e-14,39;UBERON:0010314,3.50e-14,92;UBERON:0003076,1.27e-09,12;UBERON:0003057,1.27e-09,12;UBERON:0002420,3.99e-09,8;UBERON:0007245,3.99e-09,8;UBERON:0010009,3.99e-09,8;UBERON:0010011,3.99e-09,8;UBERON:0000454,3.99e-09,8;UBERON:0000956,2.16e-08,21;UBERON:0001869,2.16e-08,21;UBERON:0000203,2.16e-08,21;UBERON:0011216,4.66e-07,194 | |||
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| |||
|short_description=p2@Mpdu1 | |||
}} |
Revision as of 10:24, 6 August 2015
Short description: | p2@Mpdu1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mpdu1_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | 5bp_to_ENSMUST00000018905, NM_011900, uc007jqv.1, uc007jqw.1_5end |
EntrezGene: | 24070 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.60e-20 | 23 |
neuroblast (sensu Vertebrata) | 5.60e-20 | 23 |
neural cell | 1.42e-18 | 43 |
ectodermal cell | 6.89e-18 | 44 |
neurectodermal cell | 6.89e-18 | 44 |
neuron | 1.50e-17 | 33 |
neuronal stem cell | 1.50e-17 | 33 |
neuroblast | 1.50e-17 | 33 |
electrically signaling cell | 1.50e-17 | 33 |
electrically responsive cell | 2.20e-13 | 39 |
electrically active cell | 2.20e-13 | 39 |
embryonic cell | 6.68e-08 | 70 |