FFCP PHASE1:Mm9::chr13:93865596..93865618,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:93865596..93865618,+|id=chr13:93865596..93865618,+|ontology_enrichment_celltype=CL:0000838!2.30e-14!12;CL:0000542!4.00e-13!13;CL:0000051!4.00e-13!13;CL:0000084!1.02e-12!11;CL:0000827!1.02e-12!11;CL:0002031!2.23e-11!25;CL:0000624!1.79e-10!8;CL:0000893!8.99e-10!6;CL:0002489!8.99e-10!6;CL:0000898!8.99e-10!6;CL:0000809!8.99e-10!6;CL:0000810!8.99e-10!6;CL:0000895!8.99e-10!6;CL:0000808!8.99e-10!6;CL:0000894!8.99e-10!6;CL:0000806!8.99e-10!6;CL:0000807!8.99e-10!6;CL:0000805!8.99e-10!6;CL:0002425!8.99e-10!6;CL:0002436!8.99e-10!6;CL:0002427!8.99e-10!6;CL:0002428!8.99e-10!6;CL:0002429!8.99e-10!6;CL:0002433!8.99e-10!6;CL:0002431!8.99e-10!6;CL:0002432!8.99e-10!6;CL:0000738!1.25e-09!17;CL:0002087!1.25e-09!17;CL:0000791!3.18e-09!9;CL:0000789!3.18e-09!9;CL:0002420!3.18e-09!9;CL:0002419!3.18e-09!9;CL:0000790!3.18e-09!9;CL:0000988!2.61e-08!32;CL:0002032!2.61e-08!32;CL:0000037!2.61e-08!32;CL:0000566!2.61e-08!32;CL:0000837!2.61e-08!32|ontology_enrichment_celltype_v019_2=CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000624,1.45e-15,8;CL:0000791,5.71e-14,9;CL:0000789,5.71e-14,9;CL:0002420,5.71e-14,9;CL:0002419,5.71e-14,9;CL:0000790,5.71e-14,9;CL:0000084,1.21e-11,11;CL:0000827,1.21e-11,11;CL:0000838,9.03e-11,12;CL:0000542,4.98e-10,13;CL:0000051,4.98e-10,13;CL:0000738,6.30e-08,17;CL:0002087,6.30e-08,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.02e-23!48;UBERON:0004177!2.20e-22!29;UBERON:0002370!6.40e-20!23;UBERON:0000974!6.40e-20!23;UBERON:0004807!6.40e-20!23;UBERON:0005058!6.40e-20!23;UBERON:0003351!6.40e-20!23;UBERON:0009113!6.40e-20!23;UBERON:0003295!6.40e-20!23;UBERON:0009722!6.40e-20!23;UBERON:0005562!6.40e-20!23;UBERON:0007690!6.40e-20!23;UBERON:0006562!6.13e-19!24;UBERON:0003408!6.13e-19!24;UBERON:0001557!6.13e-19!24;UBERON:0001042!6.13e-19!24;UBERON:0008814!6.13e-19!24;UBERON:0009145!6.13e-19!24;UBERON:0002390!1.09e-18!45;UBERON:0003061!1.09e-18!45;UBERON:0000072!1.96e-16!27;UBERON:0002405!2.06e-14!70;UBERON:0003081!3.73e-12!88;UBERON:0000063!7.29e-12!35;UBERON:0000065!3.77e-11!41;UBERON:0005057!7.58e-11!51;UBERON:0001004!8.54e-11!42;UBERON:0002465!1.89e-08!3;UBERON:0003929!2.55e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.62e-30,1;UBERON:0001097,5.62e-30,1;UBERON:0003968,5.62e-30,1;UBERON:0001467,5.62e-30,1;UBERON:0002465,5.71e-11,3|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.140788722151667,0,0.34243593645101,0.398860794976682,1.02720437958723,0.524522414513984,0,0,0,0.630924330716475,0.685572168028694,0.84877930359606,0.17008658030214,0.297872853602656,0.261199789138935,0.799962113967033,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0,0,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.721172697119813,0.590758108698309,0.302899349844443,0.228620419965,0.604957110821043,0.584747284438515,0.577271049841977,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:93865596..93865618,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:93865596..93865618,+ | |||
|description=CAGE_peak_at_chr13:93865596..93865618,+ | |||
|id=chr13:93865596..93865618,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.30e-14!12;CL:0000542!4.00e-13!13;CL:0000051!4.00e-13!13;CL:0000084!1.02e-12!11;CL:0000827!1.02e-12!11;CL:0002031!2.23e-11!25;CL:0000624!1.79e-10!8;CL:0000893!8.99e-10!6;CL:0002489!8.99e-10!6;CL:0000898!8.99e-10!6;CL:0000809!8.99e-10!6;CL:0000810!8.99e-10!6;CL:0000895!8.99e-10!6;CL:0000808!8.99e-10!6;CL:0000894!8.99e-10!6;CL:0000806!8.99e-10!6;CL:0000807!8.99e-10!6;CL:0000805!8.99e-10!6;CL:0002425!8.99e-10!6;CL:0002436!8.99e-10!6;CL:0002427!8.99e-10!6;CL:0002428!8.99e-10!6;CL:0002429!8.99e-10!6;CL:0002433!8.99e-10!6;CL:0002431!8.99e-10!6;CL:0002432!8.99e-10!6;CL:0000738!1.25e-09!17;CL:0002087!1.25e-09!17;CL:0000791!3.18e-09!9;CL:0000789!3.18e-09!9;CL:0002420!3.18e-09!9;CL:0002419!3.18e-09!9;CL:0000790!3.18e-09!9;CL:0000988!2.61e-08!32;CL:0002032!2.61e-08!32;CL:0000037!2.61e-08!32;CL:0000566!2.61e-08!32;CL:0000837!2.61e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000624,1.45e-15,8;CL:0000791,5.71e-14,9;CL:0000789,5.71e-14,9;CL:0002420,5.71e-14,9;CL:0002419,5.71e-14,9;CL:0000790,5.71e-14,9;CL:0000084,1.21e-11,11;CL:0000827,1.21e-11,11;CL:0000838,9.03e-11,12;CL:0000542,4.98e-10,13;CL:0000051,4.98e-10,13;CL:0000738,6.30e-08,17;CL:0002087,6.30e-08,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.02e-23!48;UBERON:0004177!2.20e-22!29;UBERON:0002370!6.40e-20!23;UBERON:0000974!6.40e-20!23;UBERON:0004807!6.40e-20!23;UBERON:0005058!6.40e-20!23;UBERON:0003351!6.40e-20!23;UBERON:0009113!6.40e-20!23;UBERON:0003295!6.40e-20!23;UBERON:0009722!6.40e-20!23;UBERON:0005562!6.40e-20!23;UBERON:0007690!6.40e-20!23;UBERON:0006562!6.13e-19!24;UBERON:0003408!6.13e-19!24;UBERON:0001557!6.13e-19!24;UBERON:0001042!6.13e-19!24;UBERON:0008814!6.13e-19!24;UBERON:0009145!6.13e-19!24;UBERON:0002390!1.09e-18!45;UBERON:0003061!1.09e-18!45;UBERON:0000072!1.96e-16!27;UBERON:0002405!2.06e-14!70;UBERON:0003081!3.73e-12!88;UBERON:0000063!7.29e-12!35;UBERON:0000065!3.77e-11!41;UBERON:0005057!7.58e-11!51;UBERON:0001004!8.54e-11!42;UBERON:0002465!1.89e-08!3;UBERON:0003929!2.55e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.62e-30,1;UBERON:0001097,5.62e-30,1;UBERON:0003968,5.62e-30,1;UBERON:0001467,5.62e-30,1;UBERON:0002465,5.71e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.140788722151667,0,0.34243593645101,0.398860794976682,1.02720437958723,0.524522414513984,0,0,0,0.630924330716475,0.685572168028694,0.84877930359606,0.17008658030214,0.297872853602656,0.261199789138935,0.799962113967033,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0,0,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.721172697119813,0.590758108698309,0.302899349844443,0.228620419965,0.604957110821043,0.584747284438515,0.577271049841977,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:93865596..93865618,+ | |||
}} |
Latest revision as of 10:11, 6 August 2015
Short description: | p@chr13:93865596..93865618, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:93865596..93865618, + |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.87e-30 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.87e-30 | 1 |
CD4-positive, alpha-beta T cell | 1.45e-15 | 8 |
mature alpha-beta T cell | 5.71e-14 | 9 |
alpha-beta T cell | 5.71e-14 | 9 |
immature T cell | 5.71e-14 | 9 |
mature T cell | 5.71e-14 | 9 |
immature alpha-beta T cell | 5.71e-14 | 9 |
T cell | 1.21e-11 | 11 |
pro-T cell | 1.21e-11 | 11 |
lymphoid lineage restricted progenitor cell | 9.03e-11 | 12 |
lymphocyte | 4.98e-10 | 13 |
common lymphoid progenitor | 4.98e-10 | 13 |
leukocyte | 6.30e-08 | 17 |
nongranular leukocyte | 6.30e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.62e-30 | 1 |
axillary lymph node | 5.62e-30 | 1 |
peripheral lymph node | 5.62e-30 | 1 |
shoulder | 5.62e-30 | 1 |
lymphoid system | 5.71e-11 | 3 |