FFCP PHASE1:Mm9::chrX:70905386..70905432,-: Difference between revisions
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{{FFCP|EntrezGene=93843|HGNC=|MCL_coexpression_id=1|UniProt=Q3TYC1,Q9QYK9|association_with_transcript=0bp_to_NM_001199352,uc009tme.2_5end|description=CAGE_peak_1_at_Pnck_5end|id=chrX:70905386..70905432,-|ontology_enrichment_celltype=CL:0000117!2.35e-14!23;CL:0000337!2.35e-14!23;CL:0000540!4.15e-12!33;CL:0000047!4.15e-12!33;CL:0000031!4.15e-12!33;CL:0000404!4.15e-12!33;CL:0000221!3.26e-09!44;CL:0000133!3.26e-09!44;CL:0002319!7.20e-09!43;CL:0000393!6.46e-08!39;CL:0000211!6.46e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.81e-15,23;CL:0000337,6.81e-15,23;CL:0000540,2.50e-12,33;CL:0000047,2.50e-12,33;CL:0000031,2.50e-12,33;CL:0000404,2.50e-12,33;CL:0000221,5.49e-09,44;CL:0000133,5.49e-09,44;CL:0002319,1.23e-08,43;CL:0000393,7.45e-08,39;CL:0000211,7.45e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.54e-26!73;UBERON:0005743!3.54e-26!73;UBERON:0000073!1.41e-24!75;UBERON:0001016!1.41e-24!75;UBERON:0000033!3.05e-24!63;UBERON:0002346!3.15e-24!71;UBERON:0003075!3.15e-24!71;UBERON:0007284!3.15e-24!71;UBERON:0001049!1.29e-23!52;UBERON:0005068!1.29e-23!52;UBERON:0006241!1.29e-23!52;UBERON:0007135!1.29e-23!52;UBERON:0004121!1.12e-22!102;UBERON:0000924!1.12e-22!102;UBERON:0006601!1.12e-22!102;UBERON:0000955!2.27e-22!50;UBERON:0006238!2.27e-22!50;UBERON:0002616!7.82e-22!49;UBERON:0003056!2.04e-20!49;UBERON:0003080!4.24e-19!40;UBERON:0002780!2.18e-18!39;UBERON:0001890!2.18e-18!39;UBERON:0006240!2.18e-18!39;UBERON:0002020!5.36e-18!34;UBERON:0002791!6.47e-15!29;UBERON:0003528!6.47e-15!29;UBERON:0001893!6.47e-15!29;UBERON:0007811!8.57e-12!86;UBERON:0000153!4.36e-11!94;UBERON:0000956!4.95e-10!21;UBERON:0001869!4.95e-10!21;UBERON:0000203!4.95e-10!21;UBERON:0002619!3.58e-08!17;UBERON:0004111!3.35e-07!122;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.29e-26,73;UBERON:0000073,8.23e-26,54;UBERON:0002346,3.24e-25,64;UBERON:0003075,3.24e-25,64;UBERON:0007284,3.24e-25,64;UBERON:0001016,8.80e-25,75;UBERON:0001049,3.08e-24,52;UBERON:0005068,3.08e-24,52;UBERON:0006241,3.08e-24,52;UBERON:0007135,3.08e-24,52;UBERON:0004121,1.50e-21,95;UBERON:0000924,1.50e-21,95;UBERON:0006601,1.50e-21,95;UBERON:0010314,2.79e-21,92;UBERON:0003056,3.27e-21,49;UBERON:0000955,8.04e-21,47;UBERON:0006238,8.04e-21,47;UBERON:0010371,1.11e-20,73;UBERON:0002616,2.83e-20,46;UBERON:0003080,7.73e-20,40;UBERON:0002780,4.26e-19,39;UBERON:0001890,4.26e-19,39;UBERON:0006240,4.26e-19,39;UBERON:0002020,1.09e-18,34;UBERON:0003528,1.77e-15,29;UBERON:0002791,1.77e-15,29;UBERON:0001893,1.77e-15,29;UBERON:0000956,2.18e-10,21;UBERON:0001869,2.18e-10,21;UBERON:0000203,2.18e-10,21;UBERON:0002619,1.88e-08,17;UBERON:0002021,3.04e-07,10;UBERON:0000411,3.04e-07,10;UBERON:0001950,3.04e-07,10;UBERON:0004111,9.54e-07,122|phase1_expression=7.52699581392532,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,4.76242424845991,1.58865521921416,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0.251793635951155,0.202753862439029,0,0.782391344348039,1.30815093828268,1.5378032791413,1.1665793944457,0.279972843250725,2.87505128729943,0,0,0,0.771778308107841,0.85960031981627,0,15.578367486189,24.3335850465135,20.2826049121977,1.35537812827653,1.77858959222228,0.899899717281399,0,0,2.99600110518405,6.91592949578798,9.85051316930538,13.5005938331691,8.83364837675805,27.1368435183613,28.4920417827581,12.6165523191403,12.9391385874619,22.0612508786405,40.7428759697738,22.3452841649078,24.2698322544865,23.6076455037047,29.6419965271807,15.6274011167028,29.5933978941464,50.6486349028512,41.5611233952923,22.3917724959987,22.2099822046601,17.7079473534036,0.151452386666368,0.604572480854284,2.02905142091174,0.860423876981386,0,0,0,0,2.66844398250329,0.511290967734173,0.519572009205738,0,6.61964072950398,0,0,0,0,0.506719730950197,0,0.79928715803342,0,5.64080128446334,3.29622120855658,3.34912026143355,2.30615497256059,2.86373017049983,2.70454026412121,1.25666591329675,0.741584903203122,1.44599356919912,1.76922110389975,2.42650274921114,0.883366073841574,0,5.59175283654366,9.07620470735796,6.70229461803056,0.510914110417183,0.718890747035522,0.599902730993408,0.635351135365324,31.9054061932272,20.1300265240196,16.4607201267852,22.5971616249959,22.5029602450691,30.5448425502553,23.6872244078926,3.36069900706044,2.61254638281195,1.51633655060205,2.10441855886474,3.513251959993,6.89706313300419,2.70093194708024,4.52114453507145,5.10273743634959,5.89323113310309,6.74652416830048,3.62184719034622,1.29340795759705,2.08016688184601,4.04687585577082,3.5071317188412,4.17070873838397,1.39300866608867,1.23469281844766,1.99034266818493,0,0.257347907114715,0,3.52113813310353,2.81431271977315,1.80062061461015,3.07768156260773,1.96764231747404,2.00547246753592,2.09280550275367,1.60964040839772,2.33530684734339,2.63295759861569,3.11918181750281,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:93843 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TYC1,uniprot:Q9QYK9 | |||
|association_with_transcript=0bp_to_NM_001199352,uc009tme.2_5end | |||
|cluster_id=chrX:70905386..70905432,- | |||
|description=CAGE_peak_1_at_Pnck_5end | |||
|id=chrX:70905386..70905432,- | |||
|ontology_enrichment_celltype=CL:0000117!2.35e-14!23;CL:0000337!2.35e-14!23;CL:0000540!4.15e-12!33;CL:0000047!4.15e-12!33;CL:0000031!4.15e-12!33;CL:0000404!4.15e-12!33;CL:0000221!3.26e-09!44;CL:0000133!3.26e-09!44;CL:0002319!7.20e-09!43;CL:0000393!6.46e-08!39;CL:0000211!6.46e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.81e-15,23;CL:0000337,6.81e-15,23;CL:0000540,2.50e-12,33;CL:0000047,2.50e-12,33;CL:0000031,2.50e-12,33;CL:0000404,2.50e-12,33;CL:0000221,5.49e-09,44;CL:0000133,5.49e-09,44;CL:0002319,1.23e-08,43;CL:0000393,7.45e-08,39;CL:0000211,7.45e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.54e-26!73;UBERON:0005743!3.54e-26!73;UBERON:0000073!1.41e-24!75;UBERON:0001016!1.41e-24!75;UBERON:0000033!3.05e-24!63;UBERON:0002346!3.15e-24!71;UBERON:0003075!3.15e-24!71;UBERON:0007284!3.15e-24!71;UBERON:0001049!1.29e-23!52;UBERON:0005068!1.29e-23!52;UBERON:0006241!1.29e-23!52;UBERON:0007135!1.29e-23!52;UBERON:0004121!1.12e-22!102;UBERON:0000924!1.12e-22!102;UBERON:0006601!1.12e-22!102;UBERON:0000955!2.27e-22!50;UBERON:0006238!2.27e-22!50;UBERON:0002616!7.82e-22!49;UBERON:0003056!2.04e-20!49;UBERON:0003080!4.24e-19!40;UBERON:0002780!2.18e-18!39;UBERON:0001890!2.18e-18!39;UBERON:0006240!2.18e-18!39;UBERON:0002020!5.36e-18!34;UBERON:0002791!6.47e-15!29;UBERON:0003528!6.47e-15!29;UBERON:0001893!6.47e-15!29;UBERON:0007811!8.57e-12!86;UBERON:0000153!4.36e-11!94;UBERON:0000956!4.95e-10!21;UBERON:0001869!4.95e-10!21;UBERON:0000203!4.95e-10!21;UBERON:0002619!3.58e-08!17;UBERON:0004111!3.35e-07!122;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.29e-26,73;UBERON:0000073,8.23e-26,54;UBERON:0002346,3.24e-25,64;UBERON:0003075,3.24e-25,64;UBERON:0007284,3.24e-25,64;UBERON:0001016,8.80e-25,75;UBERON:0001049,3.08e-24,52;UBERON:0005068,3.08e-24,52;UBERON:0006241,3.08e-24,52;UBERON:0007135,3.08e-24,52;UBERON:0004121,1.50e-21,95;UBERON:0000924,1.50e-21,95;UBERON:0006601,1.50e-21,95;UBERON:0010314,2.79e-21,92;UBERON:0003056,3.27e-21,49;UBERON:0000955,8.04e-21,47;UBERON:0006238,8.04e-21,47;UBERON:0010371,1.11e-20,73;UBERON:0002616,2.83e-20,46;UBERON:0003080,7.73e-20,40;UBERON:0002780,4.26e-19,39;UBERON:0001890,4.26e-19,39;UBERON:0006240,4.26e-19,39;UBERON:0002020,1.09e-18,34;UBERON:0003528,1.77e-15,29;UBERON:0002791,1.77e-15,29;UBERON:0001893,1.77e-15,29;UBERON:0000956,2.18e-10,21;UBERON:0001869,2.18e-10,21;UBERON:0000203,2.18e-10,21;UBERON:0002619,1.88e-08,17;UBERON:0002021,3.04e-07,10;UBERON:0000411,3.04e-07,10;UBERON:0001950,3.04e-07,10;UBERON:0004111,9.54e-07,122 | |||
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| |||
|short_description=p1@Pnck | |||
}} |
Revision as of 10:11, 6 August 2015
Short description: | p1@Pnck |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pnck_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_001199352, uc009tme.2_5end |
EntrezGene: | 93843 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.81e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.81e-15 | 23 |
neuron | 2.50e-12 | 33 |
neuronal stem cell | 2.50e-12 | 33 |
neuroblast | 2.50e-12 | 33 |
electrically signaling cell | 2.50e-12 | 33 |
ectodermal cell | 5.49e-09 | 44 |
neurectodermal cell | 5.49e-09 | 44 |
neural cell | 1.23e-08 | 43 |
electrically responsive cell | 7.45e-08 | 39 |
electrically active cell | 7.45e-08 | 39 |