FFCP PHASE1:Mm9::chr11:68903245..68903266,+: Difference between revisions
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{{FFCP|EntrezGene=22318|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=137bp_to_ENSMUST00000146847_5end|description=CAGE_peak_4_at_Vamp2_5end|id=chr11:68903245..68903266,+|ontology_enrichment_celltype=CL:0000221!6.19e-13!44;CL:0000133!6.19e-13!44;CL:0000540!7.12e-13!33;CL:0000047!7.12e-13!33;CL:0000031!7.12e-13!33;CL:0000404!7.12e-13!33;CL:0002319!1.00e-12!43;CL:0000117!2.20e-12!23;CL:0000337!2.20e-12!23;CL:0000055!3.42e-11!50;CL:0000393!7.71e-11!39;CL:0000211!7.71e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-18,23;CL:0000337,1.82e-18,23;CL:0000221,8.35e-16,44;CL:0000133,8.35e-16,44;CL:0002319,1.77e-15,43;CL:0000540,4.57e-15,33;CL:0000047,4.57e-15,33;CL:0000031,4.57e-15,33;CL:0000404,4.57e-15,33;CL:0000393,4.04e-12,39;CL:0000211,4.04e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.75e-28!73;UBERON:0005743!1.75e-28!73;UBERON:0000073!2.77e-27!75;UBERON:0001016!2.77e-27!75;UBERON:0004121!3.33e-26!102;UBERON:0000924!3.33e-26!102;UBERON:0006601!3.33e-26!102;UBERON:0000033!2.30e-23!63;UBERON:0001049!3.27e-23!52;UBERON:0005068!3.27e-23!52;UBERON:0006241!3.27e-23!52;UBERON:0007135!3.27e-23!52;UBERON:0000955!2.63e-22!50;UBERON:0006238!2.63e-22!50;UBERON:0002616!1.49e-21!49;UBERON:0002346!8.08e-21!71;UBERON:0003075!8.08e-21!71;UBERON:0007284!8.08e-21!71;UBERON:0002020!4.16e-19!34;UBERON:0003080!1.07e-16!40;UBERON:0003056!1.80e-16!49;UBERON:0002791!3.23e-16!29;UBERON:0003528!3.23e-16!29;UBERON:0001893!3.23e-16!29;UBERON:0002780!4.34e-16!39;UBERON:0001890!4.34e-16!39;UBERON:0006240!4.34e-16!39;UBERON:0000956!7.71e-12!21;UBERON:0001869!7.71e-12!21;UBERON:0000203!7.71e-12!21;UBERON:0007811!1.05e-10!86;UBERON:0004111!2.56e-10!122;UBERON:0002619!3.57e-10!17;UBERON:0000025!1.13e-09!114;UBERON:0000153!1.59e-09!94;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0003076!3.41e-07!12;UBERON:0003057!3.41e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-38,73;UBERON:0000073,1.64e-36,54;UBERON:0001016,1.83e-36,75;UBERON:0001049,2.62e-34,52;UBERON:0005068,2.62e-34,52;UBERON:0006241,2.62e-34,52;UBERON:0007135,2.62e-34,52;UBERON:0004121,2.59e-33,95;UBERON:0000924,2.59e-33,95;UBERON:0006601,2.59e-33,95;UBERON:0002346,1.64e-32,64;UBERON:0003075,1.64e-32,64;UBERON:0007284,1.64e-32,64;UBERON:0000955,8.59e-30,47;UBERON:0006238,8.59e-30,47;UBERON:0002020,5.38e-29,34;UBERON:0002616,1.19e-28,46;UBERON:0010371,2.58e-28,73;UBERON:0003528,1.82e-24,29;UBERON:0002791,1.82e-24,29;UBERON:0001893,1.82e-24,29;UBERON:0003080,3.66e-24,40;UBERON:0010314,6.43e-24,92;UBERON:0002780,3.19e-23,39;UBERON:0001890,3.19e-23,39;UBERON:0006240,3.19e-23,39;UBERON:0003056,4.07e-22,49;UBERON:0000956,1.30e-17,21;UBERON:0001869,1.30e-17,21;UBERON:0000203,1.30e-17,21;UBERON:0002619,5.19e-15,17;UBERON:0002021,4.39e-11,10;UBERON:0000411,4.39e-11,10;UBERON:0001950,4.39e-11,10;UBERON:0004111,5.22e-11,122;UBERON:0003076,2.29e-10,12;UBERON:0003057,2.29e-10,12;UBERON:0000025,2.37e-10,114;UBERON:0002420,6.13e-08,8;UBERON:0007245,6.13e-08,8;UBERON:0010009,6.13e-08,8;UBERON:0010011,6.13e-08,8;UBERON:0000454,6.13e-08,8|phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0,0.467225281191051,0.258246646883153,0.563154888606667,0.468129052643987,0,0.159544317990673,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.685572168028694,0,4.16712121740242,0,0,0.319984845586813,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0.485510353031154,0.125896817975577,0.304130793658544,0.550640256485045,1.56478268869608,1.30815093828268,1.31811709640683,1.74986909166855,0.699932108126813,0,0.335565212115473,0.725362142011344,0.336093799142464,0.771778308107841,0.286533439938757,1.03134418455488,2.02316460859598,3.1739458756322,3.1691570175309,0,0,0.899899717281399,0.988866362566974,0,1.49800055259202,5.76327457982332,2.07379224616955,4.45519596494579,1.05162480675691,6.56997264128748,4.41737081903227,1.5923803897944,2.20444583341944,1.83843757322004,3.30347642998166,15.0671058940522,12.9029487935245,3.42904348098504,4.57438218012048,2.08365348222704,6.70039197603314,6.75315132038016,10.8486755921535,5.00868595305235,7.68807076315156,5.40558392893372,0.075726193333184,0.529000920747499,0.289864488701678,0.860423876981386,0,0,0,0,1.82577746171277,1.87473354835864,1.03914401841148,0.35333957451034,1.12674735821344,0,0,0,0,0,0,0.79928715803342,0.517875767294343,0.445326417194474,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,1.41106448562846,0.125666591329675,0.247194967734374,0.722996784599558,0,1.29413479957927,0.441683036920787,0.484875253135222,0,6.73395833126558,3.97948742945565,0.255457055208591,0,0,0.254140454146129,7.18995069143149,8.23501085073528,3.14135880282161,13.210648334613,8.43861009190091,11.6361304953354,8.27430441645564,0.509196819251581,0.248813941220186,0.505445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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22318 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=137bp_to_ENSMUST00000146847_5end | |||
|cluster_id=chr11:68903245..68903266,+ | |||
|description=CAGE_peak_4_at_Vamp2_5end | |||
|id=chr11:68903245..68903266,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.19e-13!44;CL:0000133!6.19e-13!44;CL:0000540!7.12e-13!33;CL:0000047!7.12e-13!33;CL:0000031!7.12e-13!33;CL:0000404!7.12e-13!33;CL:0002319!1.00e-12!43;CL:0000117!2.20e-12!23;CL:0000337!2.20e-12!23;CL:0000055!3.42e-11!50;CL:0000393!7.71e-11!39;CL:0000211!7.71e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-18,23;CL:0000337,1.82e-18,23;CL:0000221,8.35e-16,44;CL:0000133,8.35e-16,44;CL:0002319,1.77e-15,43;CL:0000540,4.57e-15,33;CL:0000047,4.57e-15,33;CL:0000031,4.57e-15,33;CL:0000404,4.57e-15,33;CL:0000393,4.04e-12,39;CL:0000211,4.04e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.75e-28!73;UBERON:0005743!1.75e-28!73;UBERON:0000073!2.77e-27!75;UBERON:0001016!2.77e-27!75;UBERON:0004121!3.33e-26!102;UBERON:0000924!3.33e-26!102;UBERON:0006601!3.33e-26!102;UBERON:0000033!2.30e-23!63;UBERON:0001049!3.27e-23!52;UBERON:0005068!3.27e-23!52;UBERON:0006241!3.27e-23!52;UBERON:0007135!3.27e-23!52;UBERON:0000955!2.63e-22!50;UBERON:0006238!2.63e-22!50;UBERON:0002616!1.49e-21!49;UBERON:0002346!8.08e-21!71;UBERON:0003075!8.08e-21!71;UBERON:0007284!8.08e-21!71;UBERON:0002020!4.16e-19!34;UBERON:0003080!1.07e-16!40;UBERON:0003056!1.80e-16!49;UBERON:0002791!3.23e-16!29;UBERON:0003528!3.23e-16!29;UBERON:0001893!3.23e-16!29;UBERON:0002780!4.34e-16!39;UBERON:0001890!4.34e-16!39;UBERON:0006240!4.34e-16!39;UBERON:0000956!7.71e-12!21;UBERON:0001869!7.71e-12!21;UBERON:0000203!7.71e-12!21;UBERON:0007811!1.05e-10!86;UBERON:0004111!2.56e-10!122;UBERON:0002619!3.57e-10!17;UBERON:0000025!1.13e-09!114;UBERON:0000153!1.59e-09!94;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0003076!3.41e-07!12;UBERON:0003057!3.41e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-38,73;UBERON:0000073,1.64e-36,54;UBERON:0001016,1.83e-36,75;UBERON:0001049,2.62e-34,52;UBERON:0005068,2.62e-34,52;UBERON:0006241,2.62e-34,52;UBERON:0007135,2.62e-34,52;UBERON:0004121,2.59e-33,95;UBERON:0000924,2.59e-33,95;UBERON:0006601,2.59e-33,95;UBERON:0002346,1.64e-32,64;UBERON:0003075,1.64e-32,64;UBERON:0007284,1.64e-32,64;UBERON:0000955,8.59e-30,47;UBERON:0006238,8.59e-30,47;UBERON:0002020,5.38e-29,34;UBERON:0002616,1.19e-28,46;UBERON:0010371,2.58e-28,73;UBERON:0003528,1.82e-24,29;UBERON:0002791,1.82e-24,29;UBERON:0001893,1.82e-24,29;UBERON:0003080,3.66e-24,40;UBERON:0010314,6.43e-24,92;UBERON:0002780,3.19e-23,39;UBERON:0001890,3.19e-23,39;UBERON:0006240,3.19e-23,39;UBERON:0003056,4.07e-22,49;UBERON:0000956,1.30e-17,21;UBERON:0001869,1.30e-17,21;UBERON:0000203,1.30e-17,21;UBERON:0002619,5.19e-15,17;UBERON:0002021,4.39e-11,10;UBERON:0000411,4.39e-11,10;UBERON:0001950,4.39e-11,10;UBERON:0004111,5.22e-11,122;UBERON:0003076,2.29e-10,12;UBERON:0003057,2.29e-10,12;UBERON:0000025,2.37e-10,114;UBERON:0002420,6.13e-08,8;UBERON:0007245,6.13e-08,8;UBERON:0010009,6.13e-08,8;UBERON:0010011,6.13e-08,8;UBERON:0000454,6.13e-08,8 | |||
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| |||
|short_description=p4@Vamp2 | |||
}} |
Revision as of 09:24, 6 August 2015
Short description: | p4@Vamp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Vamp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 137bp_to_ENSMUST00000146847_5end |
EntrezGene: | 22318 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.82e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-18 | 23 |
ectodermal cell | 8.35e-16 | 44 |
neurectodermal cell | 8.35e-16 | 44 |
neural cell | 1.77e-15 | 43 |
neuron | 4.57e-15 | 33 |
neuronal stem cell | 4.57e-15 | 33 |
neuroblast | 4.57e-15 | 33 |
electrically signaling cell | 4.57e-15 | 33 |
electrically responsive cell | 4.04e-12 | 39 |
electrically active cell | 4.04e-12 | 39 |