FFCP PHASE1:Mm9::chrX:66613569..66613586,+: Difference between revisions
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{{FFCP|EntrezGene=14266|HGNC=|UniProt=O55112|association_with_transcript=63bp_to_NM_008032,uc009tjb.1_5end|description=CAGE_peak_2_at_Aff2_5end|id=chrX:66613569..66613586,+|ontology_enrichment_celltype=CL:0000117!8.79e-13!23;CL:0000337!8.79e-13!23;CL:0000393!4.75e-09!39;CL:0000211!4.75e-09!39;CL:0000540!4.62e-08!33;CL:0000047!4.62e-08!33;CL:0000031!4.62e-08!33;CL:0000404!4.62e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.40e-21,23;CL:0000337,4.40e-21,23;CL:0000540,1.37e-12,33;CL:0000047,1.37e-12,33;CL:0000031,1.37e-12,33;CL:0000404,1.37e-12,33;CL:0000393,2.76e-12,39;CL:0000211,2.76e-12,39;CL:0002319,3.50e-08,43;CL:0000221,7.36e-08,44;CL:0000133,7.36e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.64e-15!52;UBERON:0005068!1.64e-15!52;UBERON:0006241!1.64e-15!52;UBERON:0007135!1.64e-15!52;UBERON:0002020!8.20e-15!34;UBERON:0001017!4.71e-13!73;UBERON:0005743!4.71e-13!73;UBERON:0000955!8.16e-13!50;UBERON:0006238!8.16e-13!50;UBERON:0000073!9.83e-13!75;UBERON:0001016!9.83e-13!75;UBERON:0002346!1.30e-12!71;UBERON:0003075!1.30e-12!71;UBERON:0007284!1.30e-12!71;UBERON:0002616!2.34e-12!49;UBERON:0000025!3.99e-12!114;UBERON:0003080!5.02e-12!40;UBERON:0002791!1.02e-11!29;UBERON:0003528!1.02e-11!29;UBERON:0001893!1.02e-11!29;UBERON:0002780!1.62e-11!39;UBERON:0001890!1.62e-11!39;UBERON:0006240!1.62e-11!39;UBERON:0003056!2.61e-11!49;UBERON:0000033!9.66e-11!63;UBERON:0004111!2.23e-10!122;UBERON:0004121!1.88e-09!102;UBERON:0000924!1.88e-09!102;UBERON:0006601!1.88e-09!102;UBERON:0000956!6.71e-08!21;UBERON:0001869!6.71e-08!21;UBERON:0000203!6.71e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.22e-22,34;UBERON:0000073,4.76e-22,54;UBERON:0001049,8.68e-22,52;UBERON:0005068,8.68e-22,52;UBERON:0006241,8.68e-22,52;UBERON:0007135,8.68e-22,52;UBERON:0001017,1.22e-19,73;UBERON:0001016,9.06e-19,75;UBERON:0010314,3.15e-18,92;UBERON:0002346,7.28e-18,64;UBERON:0003075,7.28e-18,64;UBERON:0007284,7.28e-18,64;UBERON:0003528,1.07e-16,29;UBERON:0002791,1.07e-16,29;UBERON:0001893,1.07e-16,29;UBERON:0000955,1.19e-16,47;UBERON:0006238,1.19e-16,47;UBERON:0003080,1.62e-16,40;UBERON:0002616,6.96e-16,46;UBERON:0002780,1.19e-15,39;UBERON:0001890,1.19e-15,39;UBERON:0006240,1.19e-15,39;UBERON:0004121,1.08e-14,95;UBERON:0000924,1.08e-14,95;UBERON:0006601,1.08e-14,95;UBERON:0010371,3.02e-14,73;UBERON:0003056,3.89e-14,49;UBERON:0000025,9.71e-13,114;UBERON:0004111,5.19e-11,122;UBERON:0000956,4.37e-10,21;UBERON:0001869,4.37e-10,21;UBERON:0000203,4.37e-10,21;UBERON:0002420,2.70e-08,8;UBERON:0007245,2.70e-08,8;UBERON:0010009,2.70e-08,8;UBERON:0010011,2.70e-08,8;UBERON:0000454,2.70e-08,8;UBERON:0002240,4.17e-08,6;UBERON:0005174,4.17e-08,6;UBERON:0001137,4.17e-08,6;UBERON:0002619,7.36e-08,17;UBERON:0001948,4.81e-07,5;UBERON:0002315,4.81e-07,5;UBERON:0002021,8.10e-07,10;UBERON:0000411,8.10e-07,10;UBERON:0001950,8.10e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0,0.523523743973798,0.588231488031014,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,0,0,0,0.771778308107841,2.29226751951005,2.57836046138721,4.45096213891115,3.1739458756322,2.53532561402472,0.677689064138264,0,0,0,0,0,0,3.31806759387129,2.29510095163874,2.10324961351382,2.57085885963423,1.98781686856452,1.71487118900936,2.1086003624012,0.919218786610021,0,2.042997409363,1.99688493233117,2.90149833006426,1.9212405156506,1.04182674111352,2.23346399201105,1.68828783009504,1.98637722109853,2.94628585473668,1.99320353118744,2.60959224155421,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.587943535678524,0.125666591329675,1.23597483867187,0.578397427679647,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,1.9472783122627,1.37250180845588,1.38219787324151,0.695297280769106,1.02286182932132,3.53239675751252,1.46017136760982,0.101839363850316,0.248813941220186,1.0108910337347,0,0.390361328888111,0,0.360124259610698,0.150704817835715,0.680364991513279,1.40925092313335,0.374806898238915,1.55222022443409,3.88022387279116,4.34943984385984,2.81521798662318,0.657587197282725,2.22437799380478,0.696504333044333,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,1.65700618028402,1.87620847984877,1.80062061461015,2.13070262026689,1.18058539048442,1.23413690309903,1.39520366850245,1.60964040839772,0.817357396570186,0.493679549740441,0.492502392237286,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,1.68231958851302,1.54356918568927,0,0,1.2797295032114,1.39342003116263,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.228497025219458,0,0.407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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14266 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O55112 | |||
|association_with_transcript=63bp_to_NM_008032,uc009tjb.1_5end | |||
|cluster_id=chrX:66613569..66613586,+ | |||
|description=CAGE_peak_2_at_Aff2_5end | |||
|id=chrX:66613569..66613586,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.79e-13!23;CL:0000337!8.79e-13!23;CL:0000393!4.75e-09!39;CL:0000211!4.75e-09!39;CL:0000540!4.62e-08!33;CL:0000047!4.62e-08!33;CL:0000031!4.62e-08!33;CL:0000404!4.62e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.40e-21,23;CL:0000337,4.40e-21,23;CL:0000540,1.37e-12,33;CL:0000047,1.37e-12,33;CL:0000031,1.37e-12,33;CL:0000404,1.37e-12,33;CL:0000393,2.76e-12,39;CL:0000211,2.76e-12,39;CL:0002319,3.50e-08,43;CL:0000221,7.36e-08,44;CL:0000133,7.36e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.64e-15!52;UBERON:0005068!1.64e-15!52;UBERON:0006241!1.64e-15!52;UBERON:0007135!1.64e-15!52;UBERON:0002020!8.20e-15!34;UBERON:0001017!4.71e-13!73;UBERON:0005743!4.71e-13!73;UBERON:0000955!8.16e-13!50;UBERON:0006238!8.16e-13!50;UBERON:0000073!9.83e-13!75;UBERON:0001016!9.83e-13!75;UBERON:0002346!1.30e-12!71;UBERON:0003075!1.30e-12!71;UBERON:0007284!1.30e-12!71;UBERON:0002616!2.34e-12!49;UBERON:0000025!3.99e-12!114;UBERON:0003080!5.02e-12!40;UBERON:0002791!1.02e-11!29;UBERON:0003528!1.02e-11!29;UBERON:0001893!1.02e-11!29;UBERON:0002780!1.62e-11!39;UBERON:0001890!1.62e-11!39;UBERON:0006240!1.62e-11!39;UBERON:0003056!2.61e-11!49;UBERON:0000033!9.66e-11!63;UBERON:0004111!2.23e-10!122;UBERON:0004121!1.88e-09!102;UBERON:0000924!1.88e-09!102;UBERON:0006601!1.88e-09!102;UBERON:0000956!6.71e-08!21;UBERON:0001869!6.71e-08!21;UBERON:0000203!6.71e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.22e-22,34;UBERON:0000073,4.76e-22,54;UBERON:0001049,8.68e-22,52;UBERON:0005068,8.68e-22,52;UBERON:0006241,8.68e-22,52;UBERON:0007135,8.68e-22,52;UBERON:0001017,1.22e-19,73;UBERON:0001016,9.06e-19,75;UBERON:0010314,3.15e-18,92;UBERON:0002346,7.28e-18,64;UBERON:0003075,7.28e-18,64;UBERON:0007284,7.28e-18,64;UBERON:0003528,1.07e-16,29;UBERON:0002791,1.07e-16,29;UBERON:0001893,1.07e-16,29;UBERON:0000955,1.19e-16,47;UBERON:0006238,1.19e-16,47;UBERON:0003080,1.62e-16,40;UBERON:0002616,6.96e-16,46;UBERON:0002780,1.19e-15,39;UBERON:0001890,1.19e-15,39;UBERON:0006240,1.19e-15,39;UBERON:0004121,1.08e-14,95;UBERON:0000924,1.08e-14,95;UBERON:0006601,1.08e-14,95;UBERON:0010371,3.02e-14,73;UBERON:0003056,3.89e-14,49;UBERON:0000025,9.71e-13,114;UBERON:0004111,5.19e-11,122;UBERON:0000956,4.37e-10,21;UBERON:0001869,4.37e-10,21;UBERON:0000203,4.37e-10,21;UBERON:0002420,2.70e-08,8;UBERON:0007245,2.70e-08,8;UBERON:0010009,2.70e-08,8;UBERON:0010011,2.70e-08,8;UBERON:0000454,2.70e-08,8;UBERON:0002240,4.17e-08,6;UBERON:0005174,4.17e-08,6;UBERON:0001137,4.17e-08,6;UBERON:0002619,7.36e-08,17;UBERON:0001948,4.81e-07,5;UBERON:0002315,4.81e-07,5;UBERON:0002021,8.10e-07,10;UBERON:0000411,8.10e-07,10;UBERON:0001950,8.10e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0,0.523523743973798,0.588231488031014,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,0,0,0,0.771778308107841,2.29226751951005,2.57836046138721,4.45096213891115,3.1739458756322,2.53532561402472,0.677689064138264,0,0,0,0,0,0,3.31806759387129,2.29510095163874,2.10324961351382,2.57085885963423,1.98781686856452,1.71487118900936,2.1086003624012,0.919218786610021,0,2.042997409363,1.99688493233117,2.90149833006426,1.9212405156506,1.04182674111352,2.23346399201105,1.68828783009504,1.98637722109853,2.94628585473668,1.99320353118744,2.60959224155421,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.587943535678524,0.125666591329675,1.23597483867187,0.578397427679647,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,1.9472783122627,1.37250180845588,1.38219787324151,0.695297280769106,1.02286182932132,3.53239675751252,1.46017136760982,0.101839363850316,0.248813941220186,1.0108910337347,0,0.390361328888111,0,0.360124259610698,0.150704817835715,0.680364991513279,1.40925092313335,0.374806898238915,1.55222022443409,3.88022387279116,4.34943984385984,2.81521798662318,0.657587197282725,2.22437799380478,0.696504333044333,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,1.65700618028402,1.87620847984877,1.80062061461015,2.13070262026689,1.18058539048442,1.23413690309903,1.39520366850245,1.60964040839772,0.817357396570186,0.493679549740441,0.492502392237286,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,1.68231958851302,1.54356918568927,0,0,1.2797295032114,1.39342003116263,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0.589676985339609,0,0,0,0,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0,0.568474235311454,0.814824882210129,0.848725428875941,1.17345124144251,0.335012514883631,0.476087281772027,0.780534591431195,0.788175720530955,2.21464689648775,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,2.34423373184406,0,0,0.315508219416257,0,0.646270193198397,0,0.668396022247182,0,0,0.876767573733936,0,1.60660658210904,2.98074178937364,0,0.651547837414304,0,0,0.485561272309963,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,1.08036656418786,0.129358683782755,0,1.41872186913819,0.713475270408282,0.329098041204242,0,0.23467170806371,0.42366414172764,0,0.49465875882444,0,0.120625849856312,0.238744688006273,0,0,2.22510362412612,0,0.619160603889667,0.185194527369712,0,0.136694227721025,0,0,0,0,0,2.05618395827738,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0.56369293868419,0.598066184175915,0,0.583353565032143,0.516639293910924,0.675824501963113,0.469428954583016,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0.93841237725591,0.36630324853453,0.214368379079066,0,2.82375921308533,2.30162618253588,1.71868654031819,0.859265911718438,2.74033007908257,1.5107877947794,1.35004500046361,2.2516060161211,1.35942722695261,0,1.55681021376265,5.98537310101547,1.53660245178721,0.729320151204882,0.628839487883947,0.919217542250071,0.888986911206461,1.03017528619447,0.64183841918363,1.01078884705519,0.50695859978048,0.754505365544305,0.37456602987953,0.576226371643824,0.459483751644906,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.883193520806384,1.37147700954166,1.24233064311536,1.1921809497366,0.726732083161643,0.564656282491984,0.338458431566706,1.09756783723664,0,0.407412341537585,1.12228454331548,1.42362021749009,0.492522411877817,0,0.619747364743864,0.192906610981141,0.499621155875892,0.701794825336225,1.07435527024149,1.3390183244819,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Aff2 | |||
}} |
Revision as of 09:21, 6 August 2015
Short description: | p2@Aff2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aff2_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_NM_008032, uc009tjb.1_5end |
EntrezGene: | 14266 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.40e-21 | 23 |
neuroblast (sensu Vertebrata) | 4.40e-21 | 23 |
neuron | 1.37e-12 | 33 |
neuronal stem cell | 1.37e-12 | 33 |
neuroblast | 1.37e-12 | 33 |
electrically signaling cell | 1.37e-12 | 33 |
electrically responsive cell | 2.76e-12 | 39 |
electrically active cell | 2.76e-12 | 39 |
neural cell | 3.50e-08 | 43 |
ectodermal cell | 7.36e-08 | 44 |
neurectodermal cell | 7.36e-08 | 44 |