FFCP PHASE1:Mm9::chr13:84196042..84196073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1345 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:84196042..84196073,- | |||
|description=CAGE_peak_at_chr13:84196042..84196073,- | |description=CAGE_peak_at_chr13:84196042..84196073,- | ||
|id=chr13:84196042..84196073,- | |id=chr13:84196042..84196073,- | ||
|ontology_enrichment_celltype=CL:0000117!1.34e-18!23;CL:0000337!1.34e-18!23;CL:0002319!1.83e-14!43;CL:0000221!5.61e-14!44;CL:0000133!5.61e-14!44;CL:0000055!1.76e-11!50;CL:0000540!2.43e-11!33;CL:0000047!2.43e-11!33;CL:0000031!2.43e-11!33;CL:0000404!2.43e-11!33;CL:0002609!6.04e-10!6;CL:0000393!8.04e-09!39;CL:0000211!8.04e-09!39;CL:0000128!1.45e-07!6;CL:0000126!1.45e-07!6;CL:0000127!1.45e-07!6 | |ontology_enrichment_celltype=CL:0000117!1.34e-18!23;CL:0000337!1.34e-18!23;CL:0002319!1.83e-14!43;CL:0000221!5.61e-14!44;CL:0000133!5.61e-14!44;CL:0000055!1.76e-11!50;CL:0000540!2.43e-11!33;CL:0000047!2.43e-11!33;CL:0000031!2.43e-11!33;CL:0000404!2.43e-11!33;CL:0002609!6.04e-10!6;CL:0000393!8.04e-09!39;CL:0000211!8.04e-09!39;CL:0000128!1.45e-07!6;CL:0000126!1.45e-07!6;CL:0000127!1.45e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.09e-26,6;CL:0000126,3.09e-26,6;CL:0000127,3.09e-26,6;CL:0002605,2.50e-20,2;CL:0002604,2.50e-20,2;CL:0002453,8.23e-20,8;CL:0000333,6.04e-16,10;CL:0000095,6.04e-16,10;CL:0000243,6.04e-16,10;CL:0000123,6.04e-16,10;CL:0000125,6.04e-16,10;CL:0000030,6.04e-16,10;CL:0000339,6.04e-16,10;CL:0002319,3.21e-14,43;CL:0000221,6.82e-14,44;CL:0000133,6.82e-14,44;CL:0002321,1.25e-08,70;CL:0002609,2.04e-07,6;CL:0000117,4.19e-07,23;CL:0000337,4.19e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.76e-16!34;UBERON:0001017!8.57e-14!73;UBERON:0005743!8.57e-14!73;UBERON:0000073!3.51e-13!75;UBERON:0001016!3.51e-13!75;UBERON:0001049!1.93e-12!52;UBERON:0005068!1.93e-12!52;UBERON:0006241!1.93e-12!52;UBERON:0007135!1.93e-12!52;UBERON:0000956!2.25e-10!21;UBERON:0001869!2.25e-10!21;UBERON:0000203!2.25e-10!21;UBERON:0002791!2.71e-10!29;UBERON:0003528!2.71e-10!29;UBERON:0001893!2.71e-10!29;UBERON:0002346!1.29e-09!71;UBERON:0003075!1.29e-09!71;UBERON:0007284!1.29e-09!71;UBERON:0004121!1.95e-09!102;UBERON:0000924!1.95e-09!102;UBERON:0006601!1.95e-09!102;UBERON:0002616!2.34e-09!49;UBERON:0000955!4.71e-09!50;UBERON:0006238!4.71e-09!50;UBERON:0001954!1.57e-08!7;UBERON:0003022!1.57e-08!7;UBERON:0002421!1.57e-08!7;UBERON:0000349!1.57e-08!7;UBERON:0002600!1.57e-08!7;UBERON:0001948!2.62e-08!5;UBERON:0002315!2.62e-08!5;UBERON:0000033!3.07e-08!63;UBERON:0002780!1.93e-07!39;UBERON:0001890!1.93e-07!39;UBERON:0006240!1.93e-07!39;UBERON:0003056!2.59e-07!49;UBERON:0003076!3.26e-07!12;UBERON:0003057!3.26e-07!12;UBERON:0003080!3.82e-07!40;UBERON:0002240!8.24e-07!6;UBERON:0005174!8.24e-07!6;UBERON:0001137!8.24e-07!6 | |ontology_enrichment_uberon=UBERON:0002020!9.76e-16!34;UBERON:0001017!8.57e-14!73;UBERON:0005743!8.57e-14!73;UBERON:0000073!3.51e-13!75;UBERON:0001016!3.51e-13!75;UBERON:0001049!1.93e-12!52;UBERON:0005068!1.93e-12!52;UBERON:0006241!1.93e-12!52;UBERON:0007135!1.93e-12!52;UBERON:0000956!2.25e-10!21;UBERON:0001869!2.25e-10!21;UBERON:0000203!2.25e-10!21;UBERON:0002791!2.71e-10!29;UBERON:0003528!2.71e-10!29;UBERON:0001893!2.71e-10!29;UBERON:0002346!1.29e-09!71;UBERON:0003075!1.29e-09!71;UBERON:0007284!1.29e-09!71;UBERON:0004121!1.95e-09!102;UBERON:0000924!1.95e-09!102;UBERON:0006601!1.95e-09!102;UBERON:0002616!2.34e-09!49;UBERON:0000955!4.71e-09!50;UBERON:0006238!4.71e-09!50;UBERON:0001954!1.57e-08!7;UBERON:0003022!1.57e-08!7;UBERON:0002421!1.57e-08!7;UBERON:0000349!1.57e-08!7;UBERON:0002600!1.57e-08!7;UBERON:0001948!2.62e-08!5;UBERON:0002315!2.62e-08!5;UBERON:0000033!3.07e-08!63;UBERON:0002780!1.93e-07!39;UBERON:0001890!1.93e-07!39;UBERON:0006240!1.93e-07!39;UBERON:0003056!2.59e-07!49;UBERON:0003076!3.26e-07!12;UBERON:0003057!3.26e-07!12;UBERON:0003080!3.82e-07!40;UBERON:0002240!8.24e-07!6;UBERON:0005174!8.24e-07!6;UBERON:0001137!8.24e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.54e-13,7;UBERON:0003022,2.54e-13,7;UBERON:0002421,2.54e-13,7;UBERON:0000349,2.54e-13,7;UBERON:0002600,2.54e-13,7;UBERON:0000956,7.97e-12,21;UBERON:0001869,7.97e-12,21;UBERON:0000203,7.97e-12,21;UBERON:0001017,1.45e-10,73;UBERON:0002020,2.21e-10,34;UBERON:0001016,2.82e-10,75;UBERON:0001049,4.74e-09,52;UBERON:0005068,4.74e-09,52;UBERON:0006241,4.74e-09,52;UBERON:0007135,4.74e-09,52;UBERON:0000073,1.05e-08,54;UBERON:0003528,1.34e-08,29;UBERON:0002791,1.34e-08,29;UBERON:0001893,1.34e-08,29;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0002616,1.37e-07,46;UBERON:0000955,2.00e-07,47;UBERON:0006238,2.00e-07,47;UBERON:0002346,2.64e-07,64;UBERON:0003075,2.64e-07,64;UBERON:0007284,2.64e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.5378032791413,1.55543919259427,0.979904951377538,4.31257693094915,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,1.34796496001021,2.02508907497536,0.841299845405528,0.856952953211411,0.441737081903227,0.857435594504678,0.191690942036473,0.919218786610021,0,0.127687338085188,0.153606533256243,0.395658863190582,0.640413505216868,0,0,0,0,0.294628585473668,0.569486723196412,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89460902941206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0.818462086339379,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.5378032791413,1.55543919259427,0.979904951377538,4.31257693094915,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,1.34796496001021,2.02508907497536,0.841299845405528,0.856952953211411,0.441737081903227,0.857435594504678,0.191690942036473,0.919218786610021,0,0.127687338085188,0.153606533256243,0.395658863190582,0.640413505216868,0,0,0,0,0.294628585473668,0.569486723196412,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89460902941206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0.818462086339379,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr13:84196042..84196073,- | |short_description=p@chr13:84196042..84196073,- | ||
}} | }} |
Latest revision as of 09:09, 6 August 2015
Short description: | p@chr13:84196042..84196073, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:84196042..84196073, - |
Coexpression cluster: | MCL_coexpression_mm9:1345 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.09e-26 | 6 |
macroglial cell | 3.09e-26 | 6 |
astrocyte | 3.09e-26 | 6 |
astrocyte of the cerebral cortex | 2.50e-20 | 2 |
astrocyte of the hippocampus | 2.50e-20 | 2 |
oligodendrocyte precursor cell | 8.23e-20 | 8 |
migratory neural crest cell | 6.04e-16 | 10 |
neuron associated cell | 6.04e-16 | 10 |
glial cell (sensu Vertebrata) | 6.04e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 6.04e-16 | 10 |
glial cell | 6.04e-16 | 10 |
glioblast | 6.04e-16 | 10 |
glioblast (sensu Vertebrata) | 6.04e-16 | 10 |
neural cell | 3.21e-14 | 43 |
ectodermal cell | 6.82e-14 | 44 |
neurectodermal cell | 6.82e-14 | 44 |
embryonic cell | 1.25e-08 | 70 |
neuron of cerebral cortex | 2.04e-07 | 6 |
CNS neuron (sensu Vertebrata) | 4.19e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.19e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.54e-13 | 7 |
lobe parts of cerebral cortex | 2.54e-13 | 7 |
hippocampal formation | 2.54e-13 | 7 |
limbic system | 2.54e-13 | 7 |
limbic lobe | 2.54e-13 | 7 |
cerebral cortex | 7.97e-12 | 21 |
cerebral hemisphere | 7.97e-12 | 21 |
pallium | 7.97e-12 | 21 |
central nervous system | 1.45e-10 | 73 |
gray matter | 2.21e-10 | 34 |
nervous system | 2.82e-10 | 75 |
neural tube | 4.74e-09 | 52 |
neural rod | 4.74e-09 | 52 |
future spinal cord | 4.74e-09 | 52 |
neural keel | 4.74e-09 | 52 |
regional part of nervous system | 1.05e-08 | 54 |
brain grey matter | 1.34e-08 | 29 |
regional part of telencephalon | 1.34e-08 | 29 |
telencephalon | 1.34e-08 | 29 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
regional part of brain | 1.37e-07 | 46 |
brain | 2.00e-07 | 47 |
future brain | 2.00e-07 | 47 |
neurectoderm | 2.64e-07 | 64 |
neural plate | 2.64e-07 | 64 |
presumptive neural plate | 2.64e-07 | 64 |