FFCP PHASE1:Mm9::chr8:35040270..35040288,-: Difference between revisions
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{{FFCP|EntrezGene=19663|HGNC=|MCL_coexpression_id=19|UniProt=E9Q4D9|association_with_transcript=0bp_to_ENSMUST00000171926_5end|description=CAGE_peak_1_at_Rbpms_5end|id=chr8:35040270..35040288,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!7.93e-16!47;UBERON:0004535!2.39e-14!23;UBERON:0001009!2.39e-14!23;UBERON:0000926!6.87e-13!193;UBERON:0004120!6.87e-13!193;UBERON:0006603!6.87e-13!193;UBERON:0007100!1.44e-12!18;UBERON:0000948!1.44e-12!18;UBERON:0005498!1.44e-12!18;UBERON:0004140!1.44e-12!18;UBERON:0009881!1.44e-12!18;UBERON:0004141!1.44e-12!18;UBERON:0003084!1.44e-12!18;UBERON:0007005!1.44e-12!18;UBERON:0004139!1.44e-12!18;UBERON:0004291!1.44e-12!18;UBERON:0009569!2.05e-12!66;UBERON:0004872!1.86e-11!33;UBERON:0002100!3.49e-10!98;UBERON:0005177!3.67e-10!85;UBERON:0003103!2.32e-09!43;UBERON:0000466!1.34e-08!79;UBERON:0003104!3.69e-08!131;UBERON:0009142!3.69e-08!131;UBERON:0002048!1.06e-07!14;UBERON:0000117!1.06e-07!14;UBERON:0000171!1.06e-07!14;UBERON:0000170!1.06e-07!14;UBERON:0005597!1.06e-07!14;UBERON:0000118!1.06e-07!14;UBERON:0005153!1.34e-07!17;UBERON:0005172!1.93e-07!49;UBERON:0005173!1.93e-07!49;UBERON:0002417!1.93e-07!49;UBERON:0000916!1.93e-07!49;UBERON:0001048!2.99e-07!147;UBERON:0005157!5.20e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.88e-16,47;UBERON:0004535,2.38e-14,23;UBERON:0001009,2.38e-14,23;UBERON:0002100,1.23e-13,90;UBERON:0005177,6.45e-13,79;UBERON:0007100,1.43e-12,18;UBERON:0000948,1.43e-12,18;UBERON:0005498,1.43e-12,18;UBERON:0004140,1.43e-12,18;UBERON:0009881,1.43e-12,18;UBERON:0004141,1.43e-12,18;UBERON:0003084,1.43e-12,18;UBERON:0007005,1.43e-12,18;UBERON:0004139,1.43e-12,18;UBERON:0004291,1.43e-12,18;UBERON:0009569,2.04e-12,66;UBERON:0004872,1.85e-11,33;UBERON:0003103,2.31e-09,43;UBERON:0002048,1.05e-07,14;UBERON:0000117,1.05e-07,14;UBERON:0000171,1.05e-07,14;UBERON:0000170,1.05e-07,14;UBERON:0005597,1.05e-07,14;UBERON:0000118,1.05e-07,14;UBERON:0005153,1.33e-07,17;UBERON:0005172,1.93e-07,49;UBERON:0005173,1.93e-07,49;UBERON:0002417,1.93e-07,49;UBERON:0000916,1.93e-07,49;UBERON:0003104,2.44e-07,61;UBERON:0009142,2.44e-07,61|phase1_expression=8.64803774365887,2.44282785347553,2.27499619694768,0,0,2.35030980676646,0.934450562382103,0.387369970324729,0.563154888606667,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,3.66420737997229,2.83465374345756,1.39912375625629,4.10100814965709,5.62169177783529,6.36584477697045,100.606212248716,0.198581902401771,0,2.07990149631429,3.89995777814189,1.72269589234506,0.86152399231815,2.15471232685889,0.380046838912748,1.76421090831952,1.55211357458713,0,0,0,0,0,0,1.67412652294763,1.5626706890476,0.523523743973798,0.588231488031014,2.73218193983378,2.42755176515577,96.9405498411945,94.9901845526851,231.085360971557,76.6743517461078,31.8316728315452,82.1626323426925,86.3268751889818,20.9979632438044,27.3129872293446,6.71130424230945,0.725362142011344,1.00828139742739,207.865624317045,252.435960586045,380.566004100752,2.22548106945558,4.23192783417626,3.80298842103708,78.9507759721078,60.4720461355575,40.495487277663,27.6882581518753,35.524005747305,15.579205746957,13.831858991576,3.52544681848824,3.78016627328734,3.78584930432488,7.42692559449889,3.53389665522582,2.81728838194394,1.34183659425531,5.51531271966013,4.40463523997555,3.95830748064082,4.45458946443106,3.56092976871523,2.92760459527711,3.64639359389732,3.35019598801657,5.06486349028512,5.65353516774197,10.0173719061047,6.69146899755784,5.21918448310842,4.84647637332378,7.3304413303582,206.673380444296,146.272059086836,743.888639076279,88.511323428602,86.42026352054,110.662641113042,58.4248787748088,36.1312283865482,20.5230943636266,22.9670723431721,5.0703631119605,8.98285341900225,22.9324715735981,21.3320010945999,35.7210217668503,39.2707791486403,36.3977600410644,77.6450382089608,73.0204831885024,139.38716858187,57.9440991398894,82.2056791442781,78.6398845643159,79.88299949289,99.2448688225349,105.559936716927,368.073306956483,438.569849538092,17.6922110389975,24.5885611920062,27.8260313260096,25.6983884161668,102.515468669967,8.78342391034641,6.28340120440365,65.1415490781908,34.9860163557287,29.395233818677,31.7675567682662,10.9347166765521,10.5225138648284,2.26177833803156,9.21268897019065,7.16003280524926,8.51930982694196,8.76102820565891,126.077132446692,59.5909389222346,59.8952937487809,97.8554629872104,40.5975782043636,62.3034703014712,89.3108163834532,79.2707341815861,79.6027040070536,61.8789268975824,49.4745105675368,71.9195370654463,23.9280472155455,17.9650776159428,16.7153567955751,15.7820927347854,15.5706459566335,29.6014341543842,23.8707278233214,75.4339871242089,16.1509033082044,14.9261786126535,19.6072814582959,427.714720285811,374.772643849792,385.872997710955,471.595513285739,473.611505816001,471.440296983828,488.088750031106,447.748306935964,551.249181315407,395.601879192007,356.079229587558,464.848553935937,423.833763546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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19663 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q4D9 | |||
|association_with_transcript=0bp_to_ENSMUST00000171926_5end | |||
|cluster_id=chr8:35040270..35040288,- | |||
|description=CAGE_peak_1_at_Rbpms_5end | |||
|id=chr8:35040270..35040288,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!7.93e-16!47;UBERON:0004535!2.39e-14!23;UBERON:0001009!2.39e-14!23;UBERON:0000926!6.87e-13!193;UBERON:0004120!6.87e-13!193;UBERON:0006603!6.87e-13!193;UBERON:0007100!1.44e-12!18;UBERON:0000948!1.44e-12!18;UBERON:0005498!1.44e-12!18;UBERON:0004140!1.44e-12!18;UBERON:0009881!1.44e-12!18;UBERON:0004141!1.44e-12!18;UBERON:0003084!1.44e-12!18;UBERON:0007005!1.44e-12!18;UBERON:0004139!1.44e-12!18;UBERON:0004291!1.44e-12!18;UBERON:0009569!2.05e-12!66;UBERON:0004872!1.86e-11!33;UBERON:0002100!3.49e-10!98;UBERON:0005177!3.67e-10!85;UBERON:0003103!2.32e-09!43;UBERON:0000466!1.34e-08!79;UBERON:0003104!3.69e-08!131;UBERON:0009142!3.69e-08!131;UBERON:0002048!1.06e-07!14;UBERON:0000117!1.06e-07!14;UBERON:0000171!1.06e-07!14;UBERON:0000170!1.06e-07!14;UBERON:0005597!1.06e-07!14;UBERON:0000118!1.06e-07!14;UBERON:0005153!1.34e-07!17;UBERON:0005172!1.93e-07!49;UBERON:0005173!1.93e-07!49;UBERON:0002417!1.93e-07!49;UBERON:0000916!1.93e-07!49;UBERON:0001048!2.99e-07!147;UBERON:0005157!5.20e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.88e-16,47;UBERON:0004535,2.38e-14,23;UBERON:0001009,2.38e-14,23;UBERON:0002100,1.23e-13,90;UBERON:0005177,6.45e-13,79;UBERON:0007100,1.43e-12,18;UBERON:0000948,1.43e-12,18;UBERON:0005498,1.43e-12,18;UBERON:0004140,1.43e-12,18;UBERON:0009881,1.43e-12,18;UBERON:0004141,1.43e-12,18;UBERON:0003084,1.43e-12,18;UBERON:0007005,1.43e-12,18;UBERON:0004139,1.43e-12,18;UBERON:0004291,1.43e-12,18;UBERON:0009569,2.04e-12,66;UBERON:0004872,1.85e-11,33;UBERON:0003103,2.31e-09,43;UBERON:0002048,1.05e-07,14;UBERON:0000117,1.05e-07,14;UBERON:0000171,1.05e-07,14;UBERON:0000170,1.05e-07,14;UBERON:0005597,1.05e-07,14;UBERON:0000118,1.05e-07,14;UBERON:0005153,1.33e-07,17;UBERON:0005172,1.93e-07,49;UBERON:0005173,1.93e-07,49;UBERON:0002417,1.93e-07,49;UBERON:0000916,1.93e-07,49;UBERON:0003104,2.44e-07,61;UBERON:0009142,2.44e-07,61 | |||
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| |||
|short_description=p1@Rbpms | |||
}} |
Revision as of 08:44, 6 August 2015
Short description: | p1@Rbpms |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbpms_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000171926_5end |
EntrezGene: | 19663 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 7.88e-16 | 47 |
cardiovascular system | 2.38e-14 | 23 |
circulatory system | 2.38e-14 | 23 |
trunk | 1.23e-13 | 90 |
trunk region element | 6.45e-13 | 79 |
primary circulatory organ | 1.43e-12 | 18 |
heart | 1.43e-12 | 18 |
primitive heart tube | 1.43e-12 | 18 |
primary heart field | 1.43e-12 | 18 |
anterior lateral plate mesoderm | 1.43e-12 | 18 |
heart tube | 1.43e-12 | 18 |
heart primordium | 1.43e-12 | 18 |
cardiac mesoderm | 1.43e-12 | 18 |
cardiogenic plate | 1.43e-12 | 18 |
heart rudiment | 1.43e-12 | 18 |
subdivision of trunk | 2.04e-12 | 66 |
splanchnic layer of lateral plate mesoderm | 1.85e-11 | 33 |
compound organ | 2.31e-09 | 43 |
lung | 1.05e-07 | 14 |
respiratory tube | 1.05e-07 | 14 |
respiration organ | 1.05e-07 | 14 |
pair of lungs | 1.05e-07 | 14 |
lung primordium | 1.05e-07 | 14 |
lung bud | 1.05e-07 | 14 |
epithelial bud | 1.33e-07 | 17 |
abdomen element | 1.93e-07 | 49 |
abdominal segment element | 1.93e-07 | 49 |
abdominal segment of trunk | 1.93e-07 | 49 |
abdomen | 1.93e-07 | 49 |
mesenchyme | 2.44e-07 | 61 |
entire embryonic mesenchyme | 2.44e-07 | 61 |