FFCP PHASE1:Mm9::chr3:27883557..27883561,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=574 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:27883557..27883561,+ | |||
|description=CAGE_peak_at_chr3:27883557..27883561,+ | |description=CAGE_peak_at_chr3:27883557..27883561,+ | ||
|id=chr3:27883557..27883561,+ | |id=chr3:27883557..27883561,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.71e-15!59;UBERON:0000160!8.08e-15!43;UBERON:0004119!5.62e-13!130;UBERON:0000925!5.62e-13!130;UBERON:0006595!5.62e-13!130;UBERON:0001007!1.16e-12!128;UBERON:0001555!1.16e-12!128;UBERON:0007026!1.16e-12!128;UBERON:0004921!1.14e-11!126;UBERON:0004185!1.14e-11!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.70e-23,31;UBERON:0005409,4.59e-16,47;UBERON:0001007,5.65e-14,116;UBERON:0001555,5.65e-14,116;UBERON:0007026,5.65e-14,116;UBERON:0004119,1.51e-13,118;UBERON:0000925,1.51e-13,118;UBERON:0006595,1.51e-13,118;UBERON:0004921,2.44e-12,114;UBERON:0000344,5.12e-11,15;UBERON:0001242,1.67e-08,13;UBERON:0001262,1.67e-08,13;UBERON:0004786,1.67e-08,13;UBERON:0002108,5.52e-07,4 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,1.81478526784098,2.50447864973174,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.75991665072747,3.44113921600755,1.14846392823004,0,0.861884930743556,2.28028103347649,1.76421090831952,1.55211357458713,0,0,0,0,0.166234645358492,1.22501613757421,0,0,0,1.17646297606203,0,0,0,0,0.183546752161682,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0,0.227178579999552,0.226714680320357,3.47837386442013,1.72084775396277,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0,0.587943535678524,0.125666591329675,0.247194967734374,0.578397427679647,0,0,0,0,0,0.292780797011547,0.209446706813455,3.0654846625031,0,0,0,0,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0,1.39300866608867,0.823128545631774,0.59710280045548,0,0,0,0,0.234526059981096,0.720248245844059,0,0.196764231747404,0.925602677324269,0.465067889500816,0.536546802799238,0.467061369468678,0.16455984991348,0.492502392237286,0.486412857275134,0.292399974850665,0.658650345873152,0.805238512562231,0.630869845692382,0.205809224758569,7.59963200862735,3.70230793328962,0,0.464473343720877,0.515469845288373,2.01683524623343,1.55664630691409,1.14135375667535,5.69434873853414,1.64698954724011,2.76468729680296,1.79060824837036,2.72949721966768,5.39291645192533,4.75503709724327,5.37681437786791,0.189667900953082,0.114248512609729,1.1270773567308,0.814605311381257,0.581857461502877,0.420814919341911,0.505892296994058,0.590440591918409,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0.224862112384854,0,0,0.763877555344259,0.287696137450811,0.324270453550071,0,2.87536413054709,1.48856379067401,1.5601883655728,1.26289438973556,1.07638448113147,0.964887042726734,0.554259570499814,0,0.162964976442026,0.509235257325564,0.469380496577004,1.34005005953453,0.476087281772027,1.75620283072019,1.10344600874334,0.44292937929755,1.2756381492599,1.14704320301017,1.20879487306127,1.15719246865209,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,1.00988370881749,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.425820255624806,0,0.651547837414304,0.659880491890142,0,0,0.302323556964751,0.943025398779491,0.885905678642318,1.53717573971964,1.55056975900933,2.18120237686503,2.13898427030833,1.26414703174326,1.05418608574999,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0.469343416127421,0.42366414172764,0.220528398054962,1.31909002353184,1.61464426695906,0.422190474497091,0.238744688006273,0.656563598980245,3.20628920292836,0.370850604021019,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0.228778173206523,0,0.139951452323658,0,0.954670618015114,0.158167996790568,0.203319467126849,0.972048067396211,0.209088296014469,1.74690050996942,0.674321731924103,0.41326727862668,0.523511883968059,3.88844919875379,0,0,0.747582730219894,0,0,0.774958940866387,0.506868376472335,0.352071715937262,0,0.314578033277133,0,0,0,0.608175645870493,0.924398614483445,0.51968329191118,0.537080087002444,0,0,0,0.100966449948148,0.0762068066549998,0,0.292373642219257,0,0.233753804363138,0.906921534460845,0,0,0,0.579568782096571,0.563047426353546,0.36630324853453,1.71494703263253,0,1.12950368523413,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.222246727801615,1.03017528619447,1.92551525755089,0.505394423527595,0,1.88626341386076,0.37456602987953,0.448176066834085,0.746661096422973,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.715308569841963,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.77468420592983,0.964533054905707,0.749431733813838,0.233931608445408,0.644613162144895,1.14772999241306,0.220591419119515,0 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|phase1_expression=0,1.74487703819681,1.36499771816861,1.81478526784098,2.50447864973174,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.75991665072747,3.44113921600755,1.14846392823004,0,0.861884930743556,2.28028103347649,1.76421090831952,1.55211357458713,0,0,0,0,0.166234645358492,1.22501613757421,0,0,0,1.17646297606203,0,0,0,0,0.183546752161682,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0,0.227178579999552,0.226714680320357,3.47837386442013,1.72084775396277,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0,0.587943535678524,0.125666591329675,0.247194967734374,0.578397427679647,0,0,0,0,0,0.292780797011547,0.209446706813455,3.0654846625031,0,0,0,0,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0,1.39300866608867,0.823128545631774,0.59710280045548,0,0,0,0,0.234526059981096,0.720248245844059,0,0.196764231747404,0.925602677324269,0.465067889500816,0.536546802799238,0.467061369468678,0.16455984991348,0.492502392237286,0.486412857275134,0.292399974850665,0.658650345873152,0.805238512562231,0.630869845692382,0.205809224758569,7.59963200862735,3.70230793328962,0,0.464473343720877,0.515469845288373,2.01683524623343,1.55664630691409,1.14135375667535,5.69434873853414,1.64698954724011,2.76468729680296,1.79060824837036,2.72949721966768,5.39291645192533,4.75503709724327,5.37681437786791,0.189667900953082,0.114248512609729,1.1270773567308,0.814605311381257,0.581857461502877,0.420814919341911,0.505892296994058,0.590440591918409,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0.224862112384854,0,0,0.763877555344259,0.287696137450811,0.324270453550071,0,2.87536413054709,1.48856379067401,1.5601883655728,1.26289438973556,1.07638448113147,0.964887042726734,0.554259570499814,0,0.162964976442026,0.509235257325564,0.469380496577004,1.34005005953453,0.476087281772027,1.75620283072019,1.10344600874334,0.44292937929755,1.2756381492599,1.14704320301017,1.20879487306127,1.15719246865209,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,1.00988370881749,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.425820255624806,0,0.651547837414304,0.659880491890142,0,0,0.302323556964751,0.943025398779491,0.885905678642318,1.53717573971964,1.55056975900933,2.18120237686503,2.13898427030833,1.26414703174326,1.05418608574999,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0.469343416127421,0.42366414172764,0.220528398054962,1.31909002353184,1.61464426695906,0.422190474497091,0.238744688006273,0.656563598980245,3.20628920292836,0.370850604021019,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0.228778173206523,0,0.139951452323658,0,0.954670618015114,0.158167996790568,0.203319467126849,0.972048067396211,0.209088296014469,1.74690050996942,0.674321731924103,0.41326727862668,0.523511883968059,3.88844919875379,0,0,0.747582730219894,0,0,0.774958940866387,0.506868376472335,0.352071715937262,0,0.314578033277133,0,0,0,0.608175645870493,0.924398614483445,0.51968329191118,0.537080087002444,0,0,0,0.100966449948148,0.0762068066549998,0,0.292373642219257,0,0.233753804363138,0.906921534460845,0,0,0,0.579568782096571,0.563047426353546,0.36630324853453,1.71494703263253,0,1.12950368523413,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.222246727801615,1.03017528619447,1.92551525755089,0.505394423527595,0,1.88626341386076,0.37456602987953,0.448176066834085,0.746661096422973,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.715308569841963,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.77468420592983,0.964533054905707,0.749431733813838,0.233931608445408,0.644613162144895,1.14772999241306,0.220591419119515,0 | ||
|short_description=p@chr3:27883557..27883561,+ | |short_description=p@chr3:27883557..27883561,+ | ||
}} | }} |
Latest revision as of 08:33, 6 August 2015
Short description: | p@chr3:27883557..27883561, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:27883557..27883561, + |
Coexpression cluster: | MCL_coexpression_mm9:574 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.70e-23 | 31 |
gastrointestinal system | 4.59e-16 | 47 |
digestive system | 5.65e-14 | 116 |
digestive tract | 5.65e-14 | 116 |
primitive gut | 5.65e-14 | 116 |
endoderm-derived structure | 1.51e-13 | 118 |
endoderm | 1.51e-13 | 118 |
presumptive endoderm | 1.51e-13 | 118 |
subdivision of digestive tract | 2.44e-12 | 114 |
mucosa | 5.12e-11 | 15 |
intestinal mucosa | 1.67e-08 | 13 |
wall of intestine | 1.67e-08 | 13 |
gastrointestinal system mucosa | 1.67e-08 | 13 |
small intestine | 5.52e-07 | 4 |