FFCP PHASE1:Mm9::chr11:66770067..66770077,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-77bp_to_ENSMUST00000150220_5end | |association_with_transcript=-77bp_to_ENSMUST00000150220_5end | ||
|cluster_id=chr11:66770067..66770077,+ | |||
|description=CAGE_peak_4_at_ENSMUST00000150220_5end | |description=CAGE_peak_4_at_ENSMUST00000150220_5end | ||
|id=chr11:66770067..66770077,+ | |id=chr11:66770067..66770077,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.67e-12!9;CL:0002251!1.67e-12!9;CL:0000239!1.57e-09!6;CL:0000677!1.57e-09!6;CL:0000212!1.57e-09!6;CL:0000584!1.57e-09!6;CL:0002076!5.09e-08!15;CL:0000075!5.27e-08!7;CL:0000066!2.25e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.12e-15,6;CL:0000677,3.12e-15,6;CL:0000584,3.12e-15,6;CL:0002563,4.51e-13,9;CL:0002251,4.51e-13,9;CL:0000075,5.86e-13,7;CL:0000682,8.79e-09,3;CL:0000066,1.55e-08,25;CL:0002076,1.93e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.24e-22!59;UBERON:0000344!3.03e-21!15;UBERON:0000160!8.59e-21!43;UBERON:0001242!1.81e-18!13;UBERON:0000060!1.81e-18!13;UBERON:0001262!1.81e-18!13;UBERON:0004786!1.81e-18!13;UBERON:0004923!7.09e-15!24;UBERON:0003350!1.67e-12!9;UBERON:0004808!1.67e-12!9;UBERON:0001277!1.67e-12!9;UBERON:0004119!2.19e-12!130;UBERON:0000925!2.19e-12!130;UBERON:0006595!2.19e-12!130;UBERON:0001007!3.66e-11!128;UBERON:0001555!3.66e-11!128;UBERON:0007026!3.66e-11!128;UBERON:0000485!7.93e-10!11;UBERON:0004921!9.01e-10!126;UBERON:0004185!9.01e-10!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.06e-31,47;UBERON:0000160,1.04e-29,31;UBERON:0000344,2.09e-27,15;UBERON:0001242,9.29e-23,13;UBERON:0001262,9.29e-23,13;UBERON:0004786,9.29e-23,13;UBERON:0004923,1.51e-18,24;UBERON:0004119,1.10e-14,118;UBERON:0000925,1.10e-14,118;UBERON:0006595,1.10e-14,118;UBERON:0001007,7.62e-14,116;UBERON:0001555,7.62e-14,116;UBERON:0007026,7.62e-14,116;UBERON:0003350,4.51e-13,9;UBERON:0004808,4.51e-13,9;UBERON:0001277,4.51e-13,9;UBERON:0004921,9.66e-12,114;UBERON:0002108,1.33e-11,4;UBERON:0000485,1.64e-10,11;UBERON:0000331,1.70e-09,3;UBERON:0002116,1.70e-09,3;UBERON:0001204,1.70e-09,3;UBERON:0001168,1.70e-09,3 | |||
|phase1_expression=0,11.5161884520989,9.55498402718026,4.23449895829562,3.50627010962443,4.8684988854448,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.31960598525715,6.19405058881359,8.6134794617253,5.59990595006797,9.9116767035509,16.7220609121609,12.0974462284767,11.5299865540758,0,0,0,0.577703239502549,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0.216491041011214,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,9.70736809792647,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,7.40461586657924,0,0,0,0,0.22237804384487,0.570676878337677,7.59246498471219,0.823494773620054,0.251335208800269,0.795825888164603,1.16978452271472,15.2799299471218,8.86166004486246,6.77080329064848,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,0.21183207086382,3.08739757276947,0.8244312647074,0,0.241251699712623,0.954978752025092,1.80554989719567,4.37221254944776,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0,0.216010681643603,0,1.31017538247707,1.75323650300267,1.90102948168273,4.4498510137285,2.46268449254406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,3.67060228661162,0.187682475451182,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.467863216890817,0,0,0.220591419119515,0 | |phase1_expression=0,11.5161884520989,9.55498402718026,4.23449895829562,3.50627010962443,4.8684988854448,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.31960598525715,6.19405058881359,8.6134794617253,5.59990595006797,9.9116767035509,16.7220609121609,12.0974462284767,11.5299865540758,0,0,0,0.577703239502549,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0.216491041011214,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,9.70736809792647,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,7.40461586657924,0,0,0,0,0.22237804384487,0.570676878337677,7.59246498471219,0.823494773620054,0.251335208800269,0.795825888164603,1.16978452271472,15.2799299471218,8.86166004486246,6.77080329064848,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,0.21183207086382,3.08739757276947,0.8244312647074,0,0.241251699712623,0.954978752025092,1.80554989719567,4.37221254944776,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0,0.216010681643603,0,1.31017538247707,1.75323650300267,1.90102948168273,4.4498510137285,2.46268449254406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,3.67060228661162,0.187682475451182,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.467863216890817,0,0,0.220591419119515,0 | ||
|short_description=p4@ENSMUST00000150220 | |short_description=p4@ENSMUST00000150220 | ||
}} | }} |
Latest revision as of 07:54, 6 August 2015
Short description: | p4@ENSMUST00000150220 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ENSMUST00000150220_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -77bp_to_ENSMUST00000150220_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.12e-15 | 6 |
gut absorptive cell | 3.12e-15 | 6 |
enterocyte | 3.12e-15 | 6 |
intestinal epithelial cell | 4.51e-13 | 9 |
epithelial cell of alimentary canal | 4.51e-13 | 9 |
columnar/cuboidal epithelial cell | 5.86e-13 | 7 |
M cell of gut | 8.79e-09 | 3 |
epithelial cell | 1.55e-08 | 25 |
endo-epithelial cell | 1.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.06e-31 | 47 |
intestine | 1.04e-29 | 31 |
mucosa | 2.09e-27 | 15 |
intestinal mucosa | 9.29e-23 | 13 |
wall of intestine | 9.29e-23 | 13 |
gastrointestinal system mucosa | 9.29e-23 | 13 |
organ component layer | 1.51e-18 | 24 |
endoderm-derived structure | 1.10e-14 | 118 |
endoderm | 1.10e-14 | 118 |
presumptive endoderm | 1.10e-14 | 118 |
digestive system | 7.62e-14 | 116 |
digestive tract | 7.62e-14 | 116 |
primitive gut | 7.62e-14 | 116 |
epithelium of mucosa | 4.51e-13 | 9 |
gastrointestinal system epithelium | 4.51e-13 | 9 |
intestinal epithelium | 4.51e-13 | 9 |
subdivision of digestive tract | 9.66e-12 | 114 |
small intestine | 1.33e-11 | 4 |
simple columnar epithelium | 1.64e-10 | 11 |
ileal mucosa | 1.70e-09 | 3 |
ileum | 1.70e-09 | 3 |
mucosa of small intestine | 1.70e-09 | 3 |
wall of small intestine | 1.70e-09 | 3 |