FFCP PHASE1:Mm9::chr6:91423498..91423546,-: Difference between revisions
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{{FFCP|EntrezGene=72170|HGNC=|MCL_coexpression_id=1|UniProt=Q8VEA4|association_with_transcript=-81bp_to_ENSMUST00000040835,NM_133928,uc009cyb.1_5end|description=CAGE_peak_2_at_Chchd4_5end|id=chr6:91423498..91423546,-|ontology_enrichment_celltype=CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0000221!4.81e-11!44;CL:0000133!4.81e-11!44;CL:0002319!5.31e-11!43;CL:0000540!2.49e-09!33;CL:0000047!2.49e-09!33;CL:0000031!2.49e-09!33;CL:0000404!2.49e-09!33;CL:0000055!1.07e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-13,23;CL:0000337,2.22e-13,23;CL:0000221,4.81e-11,44;CL:0000133,4.81e-11,44;CL:0002319,5.31e-11,43;CL:0000540,2.49e-09,33;CL:0000047,2.49e-09,33;CL:0000031,2.49e-09,33;CL:0000404,2.49e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.62e-26!75;UBERON:0001016!4.62e-26!75;UBERON:0001017!1.05e-25!73;UBERON:0005743!1.05e-25!73;UBERON:0001049!1.40e-24!52;UBERON:0005068!1.40e-24!52;UBERON:0006241!1.40e-24!52;UBERON:0007135!1.40e-24!52;UBERON:0000955!1.80e-23!50;UBERON:0006238!1.80e-23!50;UBERON:0002616!6.07e-23!49;UBERON:0000033!6.36e-23!63;UBERON:0002346!1.03e-21!71;UBERON:0003075!1.03e-21!71;UBERON:0007284!1.03e-21!71;UBERON:0004121!1.42e-21!102;UBERON:0000924!1.42e-21!102;UBERON:0006601!1.42e-21!102;UBERON:0002020!1.27e-19!34;UBERON:0003080!1.55e-18!40;UBERON:0003056!3.21e-18!49;UBERON:0002780!5.21e-18!39;UBERON:0001890!5.21e-18!39;UBERON:0006240!5.21e-18!39;UBERON:0002791!1.43e-16!29;UBERON:0003528!1.43e-16!29;UBERON:0001893!1.43e-16!29;UBERON:0007811!7.42e-14!86;UBERON:0000956!1.25e-11!21;UBERON:0001869!1.25e-11!21;UBERON:0000203!1.25e-11!21;UBERON:0000153!4.22e-11!94;UBERON:0000025!1.13e-10!114;UBERON:0002619!2.96e-10!17;UBERON:0004111!2.96e-10!122;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.34e-26,54;UBERON:0001016,4.61e-26,75;UBERON:0010314,5.24e-26,92;UBERON:0001017,1.05e-25,73;UBERON:0001049,1.40e-24,52;UBERON:0005068,1.40e-24,52;UBERON:0006241,1.40e-24,52;UBERON:0007135,1.40e-24,52;UBERON:0002346,8.37e-23,64;UBERON:0003075,8.37e-23,64;UBERON:0007284,8.37e-23,64;UBERON:0004121,5.20e-22,95;UBERON:0000924,5.20e-22,95;UBERON:0006601,5.20e-22,95;UBERON:0000955,2.38e-21,47;UBERON:0006238,2.38e-21,47;UBERON:0002616,7.81e-21,46;UBERON:0002020,1.27e-19,34;UBERON:0003080,1.55e-18,40;UBERON:0003056,3.21e-18,49;UBERON:0010371,3.46e-18,73;UBERON:0002780,5.21e-18,39;UBERON:0001890,5.21e-18,39;UBERON:0006240,5.21e-18,39;UBERON:0003528,1.43e-16,29;UBERON:0002791,1.43e-16,29;UBERON:0001893,1.43e-16,29;UBERON:0000956,1.25e-11,21;UBERON:0001869,1.25e-11,21;UBERON:0000203,1.25e-11,21;UBERON:0000025,1.13e-10,114;UBERON:0002619,2.96e-10,17;UBERON:0004111,2.96e-10,122;UBERON:0002021,9.74e-08,10;UBERON:0000411,9.74e-08,10;UBERON:0001950,9.74e-08,10|phase1_expression=5.60520964866779,1.39590163055744,2.27499619694768,3.0246421130683,1.50268718983904,2.18243053485457,2.10251376535973,1.80772652818207,7.46180227403834,7.49006484230379,11.4716038711088,10.6894693053751,0.856003649656029,1.74840804837995,2.99798785634096,2.22722794128809,2.09868563438444,3.47008381894061,2.05671650408608,1.69755860719212,9.0145887560134,3.17731043842833,3.91799683708403,0.639969691173627,1.83527424853736,2.8711598205751,1.7230479846363,3.44753972297422,2.09025761402011,3.02436155711917,2.88249663851896,6.35030673459631,6.1506478758457,0,5.48818077527422,3.32469290716985,5.51257261908397,2.51118978442145,1.5626706890476,1.57057123192139,1.17646297606203,5.46436387966757,0.971020706062307,2.64383317748712,2.02753862439029,3.48738829107195,8.60630478782843,5.66865406589161,7.46933021297204,8.55491555926847,4.19959264876088,7.18762821824858,2.01339127269284,0,0.672187598284928,2.57259436035947,3.43840127926508,5.15672092277442,21.4455448511174,15.869729378161,22.1840991227163,6.43804610931351,6.22506357277798,5.39939830368839,12.8552627133707,7.104801149461,7.49000276296012,10.373894243682,7.67303131082735,9.45041568321835,8.41299845405528,23.9946826899195,27.8294361599033,11.3916443269907,12.2682202903343,11.9498442259303,29.731287869835,25.0267182646968,25.1914714540239,19.5191705840687,17.4741399280602,22.3992749339407,33.7811428791671,26.449842671489,26.1285003698345,17.9723437138937,18.6506901846825,17.8943467992289,8.63278603998298,5.29000920747499,4.34796733052517,2.58127163094416,12.9194553404473,1.61910957491345,7.14754059192436,5.82434953226536,10.5333315098814,3.40860645156115,4.67614808285164,5.65343319216544,5.63373679106722,7.69958864485907,2.54805239706646,0,4.76280290224671,2.78695852022608,5.56076889516262,5.02409070763864,2.84831672011889,4.60170631100957,4.16364784238726,3.65358573974569,5.30415643688935,5.57673770044703,4.8211369925639,8.16832843642891,5.19109432242185,8.82056077211461,1.76922110389975,5.98537344805414,5.07935492458905,4.84875253135222,1.86391761218122,13.7606974595427,10.4723353406728,2.55457055208591,3.95389910869537,2.99951365496704,3.55796635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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72170 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VEA4 | |||
|association_with_transcript=-81bp_to_ENSMUST00000040835,NM_133928,uc009cyb.1_5end | |||
|cluster_id=chr6:91423498..91423546,- | |||
|description=CAGE_peak_2_at_Chchd4_5end | |||
|id=chr6:91423498..91423546,- | |||
|ontology_enrichment_celltype=CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0000221!4.81e-11!44;CL:0000133!4.81e-11!44;CL:0002319!5.31e-11!43;CL:0000540!2.49e-09!33;CL:0000047!2.49e-09!33;CL:0000031!2.49e-09!33;CL:0000404!2.49e-09!33;CL:0000055!1.07e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-13,23;CL:0000337,2.22e-13,23;CL:0000221,4.81e-11,44;CL:0000133,4.81e-11,44;CL:0002319,5.31e-11,43;CL:0000540,2.49e-09,33;CL:0000047,2.49e-09,33;CL:0000031,2.49e-09,33;CL:0000404,2.49e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.62e-26!75;UBERON:0001016!4.62e-26!75;UBERON:0001017!1.05e-25!73;UBERON:0005743!1.05e-25!73;UBERON:0001049!1.40e-24!52;UBERON:0005068!1.40e-24!52;UBERON:0006241!1.40e-24!52;UBERON:0007135!1.40e-24!52;UBERON:0000955!1.80e-23!50;UBERON:0006238!1.80e-23!50;UBERON:0002616!6.07e-23!49;UBERON:0000033!6.36e-23!63;UBERON:0002346!1.03e-21!71;UBERON:0003075!1.03e-21!71;UBERON:0007284!1.03e-21!71;UBERON:0004121!1.42e-21!102;UBERON:0000924!1.42e-21!102;UBERON:0006601!1.42e-21!102;UBERON:0002020!1.27e-19!34;UBERON:0003080!1.55e-18!40;UBERON:0003056!3.21e-18!49;UBERON:0002780!5.21e-18!39;UBERON:0001890!5.21e-18!39;UBERON:0006240!5.21e-18!39;UBERON:0002791!1.43e-16!29;UBERON:0003528!1.43e-16!29;UBERON:0001893!1.43e-16!29;UBERON:0007811!7.42e-14!86;UBERON:0000956!1.25e-11!21;UBERON:0001869!1.25e-11!21;UBERON:0000203!1.25e-11!21;UBERON:0000153!4.22e-11!94;UBERON:0000025!1.13e-10!114;UBERON:0002619!2.96e-10!17;UBERON:0004111!2.96e-10!122;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.34e-26,54;UBERON:0001016,4.61e-26,75;UBERON:0010314,5.24e-26,92;UBERON:0001017,1.05e-25,73;UBERON:0001049,1.40e-24,52;UBERON:0005068,1.40e-24,52;UBERON:0006241,1.40e-24,52;UBERON:0007135,1.40e-24,52;UBERON:0002346,8.37e-23,64;UBERON:0003075,8.37e-23,64;UBERON:0007284,8.37e-23,64;UBERON:0004121,5.20e-22,95;UBERON:0000924,5.20e-22,95;UBERON:0006601,5.20e-22,95;UBERON:0000955,2.38e-21,47;UBERON:0006238,2.38e-21,47;UBERON:0002616,7.81e-21,46;UBERON:0002020,1.27e-19,34;UBERON:0003080,1.55e-18,40;UBERON:0003056,3.21e-18,49;UBERON:0010371,3.46e-18,73;UBERON:0002780,5.21e-18,39;UBERON:0001890,5.21e-18,39;UBERON:0006240,5.21e-18,39;UBERON:0003528,1.43e-16,29;UBERON:0002791,1.43e-16,29;UBERON:0001893,1.43e-16,29;UBERON:0000956,1.25e-11,21;UBERON:0001869,1.25e-11,21;UBERON:0000203,1.25e-11,21;UBERON:0000025,1.13e-10,114;UBERON:0002619,2.96e-10,17;UBERON:0004111,2.96e-10,122;UBERON:0002021,9.74e-08,10;UBERON:0000411,9.74e-08,10;UBERON:0001950,9.74e-08,10 | |||
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| |||
|short_description=p2@Chchd4 | |||
}} |
Revision as of 07:51, 6 August 2015
Short description: | p2@Chchd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chchd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -81bp_to_ENSMUST00000040835, NM_133928, uc009cyb.1_5end |
EntrezGene: | 72170 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.22e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.22e-13 | 23 |
ectodermal cell | 4.81e-11 | 44 |
neurectodermal cell | 4.81e-11 | 44 |
neural cell | 5.31e-11 | 43 |
neuron | 2.49e-09 | 33 |
neuronal stem cell | 2.49e-09 | 33 |
neuroblast | 2.49e-09 | 33 |
electrically signaling cell | 2.49e-09 | 33 |