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FFCP PHASE1:Mm9::chr11:66340137..66340205,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1981
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr11:66340137..66340205,-
|description=CAGE_peak_at_chr11:66340137..66340205,-
|description=CAGE_peak_at_chr11:66340137..66340205,-
|id=chr11:66340137..66340205,-
|id=chr11:66340137..66340205,-
|ontology_enrichment_celltype=CL:0000117!2.08e-12!23;CL:0000337!2.08e-12!23;CL:0002319!2.64e-10!43;CL:0000221!3.47e-10!44;CL:0000133!3.47e-10!44;CL:0000540!7.25e-08!33;CL:0000047!7.25e-08!33;CL:0000031!7.25e-08!33;CL:0000404!7.25e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,7.54e-16,23;CL:0000337,7.54e-16,23;CL:0002319,1.40e-11,43;CL:0000221,4.48e-11,44;CL:0000133,4.48e-11,44;CL:0000540,1.47e-08,33;CL:0000047,1.47e-08,33;CL:0000031,1.47e-08,33;CL:0000404,1.47e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.13e-22!73;UBERON:0005743!3.13e-22!73;UBERON:0000073!9.33e-22!75;UBERON:0001016!9.33e-22!75;UBERON:0001049!4.90e-20!52;UBERON:0005068!4.90e-20!52;UBERON:0006241!4.90e-20!52;UBERON:0007135!4.90e-20!52;UBERON:0000955!9.32e-19!50;UBERON:0006238!9.32e-19!50;UBERON:0002346!2.52e-18!71;UBERON:0003075!2.52e-18!71;UBERON:0007284!2.52e-18!71;UBERON:0002616!4.79e-18!49;UBERON:0000033!5.95e-18!63;UBERON:0002020!6.70e-18!34;UBERON:0004121!2.66e-16!102;UBERON:0000924!2.66e-16!102;UBERON:0006601!2.66e-16!102;UBERON:0007811!8.87e-15!86;UBERON:0003056!1.16e-14!49;UBERON:0002791!1.71e-14!29;UBERON:0003528!1.71e-14!29;UBERON:0001893!1.71e-14!29;UBERON:0000153!8.01e-14!94;UBERON:0003080!9.53e-14!40;UBERON:0002780!3.42e-13!39;UBERON:0001890!3.42e-13!39;UBERON:0006240!3.42e-13!39;UBERON:0000956!4.88e-11!21;UBERON:0001869!4.88e-11!21;UBERON:0000203!4.88e-11!21;UBERON:0002619!1.43e-09!17;UBERON:0000468!2.23e-07!333;UBERON:0003076!3.34e-07!12;UBERON:0003057!3.34e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.16e-25,54;UBERON:0001017,3.53e-25,73;UBERON:0001016,6.02e-24,75;UBERON:0002020,1.86e-23,34;UBERON:0001049,1.88e-23,52;UBERON:0005068,1.88e-23,52;UBERON:0006241,1.88e-23,52;UBERON:0007135,1.88e-23,52;UBERON:0002346,4.80e-20,64;UBERON:0003075,4.80e-20,64;UBERON:0007284,4.80e-20,64;UBERON:0000955,4.26e-19,47;UBERON:0006238,4.26e-19,47;UBERON:0003528,9.33e-19,29;UBERON:0002791,9.33e-19,29;UBERON:0001893,9.33e-19,29;UBERON:0002616,3.43e-18,46;UBERON:0004121,4.94e-18,95;UBERON:0000924,4.94e-18,95;UBERON:0006601,4.94e-18,95;UBERON:0010371,1.92e-15,73;UBERON:0003080,1.00e-14,40;UBERON:0000956,1.06e-14,21;UBERON:0001869,1.06e-14,21;UBERON:0000203,1.06e-14,21;UBERON:0002780,5.26e-14,39;UBERON:0001890,5.26e-14,39;UBERON:0006240,5.26e-14,39;UBERON:0003056,1.40e-13,49;UBERON:0002619,1.14e-12,17;UBERON:0010314,1.27e-12,92;UBERON:0003076,6.61e-10,12;UBERON:0003057,6.61e-10,12;UBERON:0000025,3.91e-07,114;UBERON:0001954,4.22e-07,7;UBERON:0003022,4.22e-07,7;UBERON:0002421,4.22e-07,7;UBERON:0000349,4.22e-07,7;UBERON:0002600,4.22e-07,7;UBERON:0002021,4.23e-07,10;UBERON:0000411,4.23e-07,10;UBERON:0001950,4.23e-07,10;UBERON:0002240,8.56e-07,6;UBERON:0005174,8.56e-07,6;UBERON:0001137,8.56e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.74190476664707,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,8.72100625521786,17.1355222532888,27.8034755676225,3.49966054063406,7.18762821824858,0,0,0,0,0,0,3.84401275633236,5.81890077199236,1.90149421051854,0.338844532069132,0,0.449949858640699,0,0,4.19440154725767,3.07374644257244,2.48855069540346,1.62007125998029,2.10324961351382,9.14083150092171,10.1599528837742,2.32732518508413,2.58782771749238,4.5960939330501,9.91042928994498,16.343979274904,13.2101618600369,4.2203612073662,2.19570344645783,0.52091337055676,10.0505879640497,2.8138130501584,12.835052813252,17.9723437138937,17.0846016958924,10.4383689662168,0.075726193333184,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,1.29894624606728,0.506719730950197,1.01104889002957,0.22836775943812,0,0,0.520455980298408,1.21786191324856,0.230615497256059,0.60289056221049,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,40.4037499875935,54.6655904783118,0,0,0,0,5.69204429738326,7.77751024791665,3.26701315493447,4.51943232499919,5.8814555185976,16.2074674756457,10.707923362472,0.407357455401265,0.124406970610093,0,0.631325567659422,0.390361328888111,0.459804208866946,0.540186389416048,0.753524089178575,1.29269348387523,2.562274405697,1.96773621575431,2.58703370739016,0.862271971731369,0.567318240503458,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0,1.19420560091096,0,0,0.284163499395593,2.27838349789052,1.64168241986767,0.36012412292203,1.42046841351126,0.983821158737019,1.54267112887378,0.465067889500816,0.536546802799238,0.233530684734339,0.658239399653922,0,0.162137619091711,0,0,1.47627060636409,47.1049484783645,32.1062390623367,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.456994050438915,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.89491411770485,0.325929952884052,0.678980343100753,0.704070744865506,0.502518772325447,3.33261097240419,3.12213836572478,1.10344600874334,1.55025282754142,0,0.983179888294428,0.345369963731791,0.289298117163023,0,0,0,0,6.10092241953609,7.73597131508541,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0.283076530788832,0,0,0.395287777946524,17.6726724031994,9.22610553853746,1.95872164033981,1.30309567482861,0.164970122972535,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0.177340233642274,0.713475270408282,0.493647061806363,0.913394847343798,0,0.42366414172764,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,6.30446026835733,1.36696704638282,0,0,0.753473828018764,0.820165366326151,0.228778173206523,0,0,0,0,0.949007980743406,0.609958401380546,0.756037385752609,0.209088296014469,0.655087691238533,0.269728692769641,0.578574190077352,0.523511883968059,0.259229946583586,0,0,1.04661582230785,1.32366792365678,1.75006069509643,1.16243841129958,1.35164900392623,1.29092962510329,3.1249052362548,4.8235298435827,0.483168241652012,0,1.89606672376907,3.64905387522296,4.5192821152524,2.07873316764472,1.43221356533985,0.79472541912506,0.961563596159751,0.886137163047463,0.504832249740738,0.762068066549998,0.907435666231565,0.682205165178267,1.15454209968395,0.701261413089414,0.226730383615211,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,2.25900737046827,4.60325236507177,4.58316410751517,3.60891682921744,3.42541259885321,1.5107877947794,3.37511250115903,1.80128481289688,2.26571204492102,5.1776031175182,0.31136204275253,0.798049746802062,1.02440163452481,1.45864030240976,1.25767897576789,1.10306105070008,1.33348036680969,1.85431551515005,2.88827288632634,2.52697211763797,1.52087579934144,1.50901073108861,1.21733959710847,1.53660365771686,1.49332219284595,0.952587382566147,2.0859178670074,0.77163688185482,1.64834360321323,0.735994600671987,1.71434626192708,1.24233064311536,1.90748951957857,1.59881058295561,1.59985946706062,2.79228206042532,2.0122077016005,0.263069711437843,1.7654534799962,1.12228454331548,1.18635018124174,1.28055827088233,2.04615521584845,1.39443157067369,1.54325288784913,2.74791635731741,1.87145286756327,1.93383948643468,0.765153328275374,0.220591419119515,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.74190476664707,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,8.72100625521786,17.1355222532888,27.8034755676225,3.49966054063406,7.18762821824858,0,0,0,0,0,0,3.84401275633236,5.81890077199236,1.90149421051854,0.338844532069132,0,0.449949858640699,0,0,4.19440154725767,3.07374644257244,2.48855069540346,1.62007125998029,2.10324961351382,9.14083150092171,10.1599528837742,2.32732518508413,2.58782771749238,4.5960939330501,9.91042928994498,16.343979274904,13.2101618600369,4.2203612073662,2.19570344645783,0.52091337055676,10.0505879640497,2.8138130501584,12.835052813252,17.9723437138937,17.0846016958924,10.4383689662168,0.075726193333184,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,1.29894624606728,0.506719730950197,1.01104889002957,0.22836775943812,0,0,0.520455980298408,1.21786191324856,0.230615497256059,0.60289056221049,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,40.4037499875935,54.6655904783118,0,0,0,0,5.69204429738326,7.77751024791665,3.26701315493447,4.51943232499919,5.8814555185976,16.2074674756457,10.707923362472,0.407357455401265,0.124406970610093,0,0.631325567659422,0.390361328888111,0.459804208866946,0.540186389416048,0.753524089178575,1.29269348387523,2.562274405697,1.96773621575431,2.58703370739016,0.862271971731369,0.567318240503458,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0,1.19420560091096,0,0,0.284163499395593,2.27838349789052,1.64168241986767,0.36012412292203,1.42046841351126,0.983821158737019,1.54267112887378,0.465067889500816,0.536546802799238,0.233530684734339,0.658239399653922,0,0.162137619091711,0,0,1.47627060636409,47.1049484783645,32.1062390623367,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.456994050438915,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.89491411770485,0.325929952884052,0.678980343100753,0.704070744865506,0.502518772325447,3.33261097240419,3.12213836572478,1.10344600874334,1.55025282754142,0,0.983179888294428,0.345369963731791,0.289298117163023,0,0,0,0,6.10092241953609,7.73597131508541,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0.283076530788832,0,0,0.395287777946524,17.6726724031994,9.22610553853746,1.95872164033981,1.30309567482861,0.164970122972535,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0.177340233642274,0.713475270408282,0.493647061806363,0.913394847343798,0,0.42366414172764,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,6.30446026835733,1.36696704638282,0,0,0.753473828018764,0.820165366326151,0.228778173206523,0,0,0,0,0.949007980743406,0.609958401380546,0.756037385752609,0.209088296014469,0.655087691238533,0.269728692769641,0.578574190077352,0.523511883968059,0.259229946583586,0,0,1.04661582230785,1.32366792365678,1.75006069509643,1.16243841129958,1.35164900392623,1.29092962510329,3.1249052362548,4.8235298435827,0.483168241652012,0,1.89606672376907,3.64905387522296,4.5192821152524,2.07873316764472,1.43221356533985,0.79472541912506,0.961563596159751,0.886137163047463,0.504832249740738,0.762068066549998,0.907435666231565,0.682205165178267,1.15454209968395,0.701261413089414,0.226730383615211,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,2.25900737046827,4.60325236507177,4.58316410751517,3.60891682921744,3.42541259885321,1.5107877947794,3.37511250115903,1.80128481289688,2.26571204492102,5.1776031175182,0.31136204275253,0.798049746802062,1.02440163452481,1.45864030240976,1.25767897576789,1.10306105070008,1.33348036680969,1.85431551515005,2.88827288632634,2.52697211763797,1.52087579934144,1.50901073108861,1.21733959710847,1.53660365771686,1.49332219284595,0.952587382566147,2.0859178670074,0.77163688185482,1.64834360321323,0.735994600671987,1.71434626192708,1.24233064311536,1.90748951957857,1.59881058295561,1.59985946706062,2.79228206042532,2.0122077016005,0.263069711437843,1.7654534799962,1.12228454331548,1.18635018124174,1.28055827088233,2.04615521584845,1.39443157067369,1.54325288784913,2.74791635731741,1.87145286756327,1.93383948643468,0.765153328275374,0.220591419119515,0.463735671240843
|short_description=p@chr11:66340137..66340205,-
|short_description=p@chr11:66340137..66340205,-
}}
}}

Latest revision as of 07:50, 6 August 2015

Short description:p@chr11:66340137..66340205, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:66340137..66340205, -
Coexpression cluster:MCL_coexpression_mm9:1981
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr11:66340137..66340205-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B240.40
cerebellum, neonate N30.CNhs11135.1395-42I254.67
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E847.10
hippocampus, neonate N00.CNhs11228.627-43G132.11
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I79.23
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D94.82
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.54e-1623
neuroblast (sensu Vertebrata)7.54e-1623
neural cell1.40e-1143
ectodermal cell4.48e-1144
neurectodermal cell4.48e-1144
neuron1.47e-0833
neuronal stem cell1.47e-0833
neuroblast1.47e-0833
electrically signaling cell1.47e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.16e-2554
central nervous system3.53e-2573
nervous system6.02e-2475
gray matter1.86e-2334
neural tube1.88e-2352
neural rod1.88e-2352
future spinal cord1.88e-2352
neural keel1.88e-2352
neurectoderm4.80e-2064
neural plate4.80e-2064
presumptive neural plate4.80e-2064
brain4.26e-1947
future brain4.26e-1947
brain grey matter9.33e-1929
regional part of telencephalon9.33e-1929
telencephalon9.33e-1929
regional part of brain3.43e-1846
ectoderm-derived structure4.94e-1895
ectoderm4.94e-1895
presumptive ectoderm4.94e-1895
ecto-epithelium1.92e-1573
anterior neural tube1.00e-1440
cerebral cortex1.06e-1421
cerebral hemisphere1.06e-1421
pallium1.06e-1421
regional part of forebrain5.26e-1439
forebrain5.26e-1439
future forebrain5.26e-1439
pre-chordal neural plate1.40e-1349
regional part of cerebral cortex1.14e-1217
structure with developmental contribution from neural crest1.27e-1292
posterior neural tube6.61e-1012
chordal neural plate6.61e-1012
tube3.91e-07114
Ammon's horn4.22e-077
lobe parts of cerebral cortex4.22e-077
hippocampal formation4.22e-077
limbic system4.22e-077
limbic lobe4.22e-077
occipital lobe4.23e-0710
visual cortex4.23e-0710
neocortex4.23e-0710
spinal cord8.56e-076
dorsal region element8.56e-076
dorsum8.56e-076
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