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FFCP PHASE1:Mm9::chrX:45561874..45561885,-: Difference between revisions

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{{FFCP|EntrezGene=208884|HGNC=|UniProt=B1AVD4,P59268|association_with_transcript=0bp_to_NM_172465,uc009tbx.2_5end|description=CAGE_peak_3_at_Zdhhc9_5end|id=chrX:45561874..45561885,-|ontology_enrichment_celltype=CL:0002321!1.82e-08!70;CL:0000220!1.82e-08!70;CL:0002319!5.05e-08!43;CL:0000221!1.44e-07!44;CL:0000133!1.44e-07!44;CL:0000055!3.23e-07!50;CL:0000117!5.09e-07!23;CL:0000337!5.09e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.42e-09,23;CL:0000337,4.42e-09,23;CL:0002321,1.10e-07,70;CL:0002319,2.13e-07,43;CL:0000221,4.71e-07,44;CL:0000133,4.71e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.98e-11!73;UBERON:0005743!6.98e-11!73;UBERON:0000073!1.14e-10!75;UBERON:0001016!1.14e-10!75;UBERON:0004121!1.28e-09!102;UBERON:0000924!1.28e-09!102;UBERON:0006601!1.28e-09!102;UBERON:0002020!6.61e-09!34;UBERON:0002791!1.24e-08!29;UBERON:0003528!1.24e-08!29;UBERON:0001893!1.24e-08!29;UBERON:0001049!1.32e-08!52;UBERON:0005068!1.32e-08!52;UBERON:0006241!1.32e-08!52;UBERON:0007135!1.32e-08!52;UBERON:0002346!3.48e-08!71;UBERON:0003075!3.48e-08!71;UBERON:0007284!3.48e-08!71;UBERON:0000033!5.15e-08!63;UBERON:0000955!8.00e-08!50;UBERON:0006238!8.00e-08!50;UBERON:0002616!1.04e-07!49;UBERON:0007023!4.89e-07!51;UBERON:0000956!5.37e-07!21;UBERON:0001869!5.37e-07!21;UBERON:0000203!5.37e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.62e-12,73;UBERON:0001049,1.02e-11,52;UBERON:0005068,1.02e-11,52;UBERON:0006241,1.02e-11,52;UBERON:0007135,1.02e-11,52;UBERON:0001016,1.34e-11,75;UBERON:0003528,1.56e-11,29;UBERON:0002791,1.56e-11,29;UBERON:0001893,1.56e-11,29;UBERON:0002020,2.07e-11,34;UBERON:0002346,4.12e-11,64;UBERON:0003075,4.12e-11,64;UBERON:0007284,4.12e-11,64;UBERON:0002616,4.69e-11,46;UBERON:0000073,4.96e-11,54;UBERON:0000955,1.33e-10,47;UBERON:0006238,1.33e-10,47;UBERON:0004121,4.69e-10,95;UBERON:0000924,4.69e-10,95;UBERON:0006601,4.69e-10,95;UBERON:0000956,5.65e-09,21;UBERON:0001869,5.65e-09,21;UBERON:0000203,5.65e-09,21;UBERON:0007023,5.71e-09,51;UBERON:0010371,9.21e-09,73;UBERON:0011216,5.69e-08,194;UBERON:0003080,1.11e-07,40;UBERON:0000344,2.22e-07,15;UBERON:0002780,2.49e-07,39;UBERON:0001890,2.49e-07,39;UBERON:0006240,2.49e-07,39;UBERON:0003056,5.38e-07,49|phase1_expression=0.480446541314382,2.79180326111489,2.72999543633722,2.72217790176147,3.00537437967808,1.17515490338323,1.40167584357315,0,0,0,0.513653904676515,0,0,0.262261207256992,0,0,0,0,0.137114433605739,0.42438965179803,0.595303031057488,0,0.261199789138935,2.87986361028132,3.21172993494038,3.44539178469012,0.86152399231815,1.50829862880122,1.90023419456374,2.77233142735924,0.443461021310609,0,0,0,0.866554859253824,1.32987716286794,0.612508068787107,0.418531630736908,0,0,0,0.683045484958446,0,1.1330713617802,0.608261587317087,0.550640256485045,3.12956537739216,1.30815093828268,0.659058548203415,0.777719596297134,0.55994568650145,2.87505128729943,0.167782606057736,0,0,0.514518872071894,0.573066879877513,0.515672092277442,1.01158230429799,2.64495489636016,1.90149421051854,0.338844532069132,0,0,1.97773272513395,0,2.39680088414724,2.30530983192933,3.11068836925433,3.24014251996058,4.6271491497304,1.14260393761521,1.32521124570968,2.08234358665422,1.91690942036473,1.83843757322004,0,0.893811366596314,2.30409799884365,1.45074916503213,1.9212405156506,1.56274011167028,1.95428099300967,1.12552522006336,1.22238598221448,0.294628585473668,0.996601765593721,1.4911955666024,0.605809546665472,0.68014404096107,0.869593466105033,0.860423876981386,2.03991400112325,3.77792234146472,0.649776417447669,3.58421509677868,1.40444420131752,0.681721290312231,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,1.02765491747154,0.517875767294343,0,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.705532242814229,0.753999547978053,1.97755974187499,0.86759614151947,1.76922110389975,0.485300549842228,0.441683036920787,0.969750506270444,1.86391761218122,3.80615036115011,2.51336048176146,1.78819938646014,0,0,0.127070227073065,1.3481157546434,1.37250180845588,0.376963056338593,1.21677024134594,1.27857728665165,1.24672826735736,0.973447578406546,0.611036183101898,0.248813941220186,0.252722758433675,2.31486041475121,0.780722657776222,0.689706313300419,0.720248519221397,0.753524089178575,0.680364991513279,0.384341160854549,1.12442069471675,2.84573707812917,0.862271971731369,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,0.348252166522167,1.02891068203972,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,0.656669856316381,1.13496333364198,0.730999937126662,0.658650345873152,0.939444931322602,1.89260953707715,4.11618449517138,5.94753809370836,1.58670339998127,0.213288250535234,0.464473343720877,0.644337306610467,1.00841762311671,0,0.570676878337677,2.372645307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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:208884
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:B1AVD4,uniprot:P59268
|association_with_transcript=0bp_to_NM_172465,uc009tbx.2_5end
|cluster_id=chrX:45561874..45561885,-
|description=CAGE_peak_3_at_Zdhhc9_5end
|id=chrX:45561874..45561885,-
|ontology_enrichment_celltype=CL:0002321!1.82e-08!70;CL:0000220!1.82e-08!70;CL:0002319!5.05e-08!43;CL:0000221!1.44e-07!44;CL:0000133!1.44e-07!44;CL:0000055!3.23e-07!50;CL:0000117!5.09e-07!23;CL:0000337!5.09e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.42e-09,23;CL:0000337,4.42e-09,23;CL:0002321,1.10e-07,70;CL:0002319,2.13e-07,43;CL:0000221,4.71e-07,44;CL:0000133,4.71e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.98e-11!73;UBERON:0005743!6.98e-11!73;UBERON:0000073!1.14e-10!75;UBERON:0001016!1.14e-10!75;UBERON:0004121!1.28e-09!102;UBERON:0000924!1.28e-09!102;UBERON:0006601!1.28e-09!102;UBERON:0002020!6.61e-09!34;UBERON:0002791!1.24e-08!29;UBERON:0003528!1.24e-08!29;UBERON:0001893!1.24e-08!29;UBERON:0001049!1.32e-08!52;UBERON:0005068!1.32e-08!52;UBERON:0006241!1.32e-08!52;UBERON:0007135!1.32e-08!52;UBERON:0002346!3.48e-08!71;UBERON:0003075!3.48e-08!71;UBERON:0007284!3.48e-08!71;UBERON:0000033!5.15e-08!63;UBERON:0000955!8.00e-08!50;UBERON:0006238!8.00e-08!50;UBERON:0002616!1.04e-07!49;UBERON:0007023!4.89e-07!51;UBERON:0000956!5.37e-07!21;UBERON:0001869!5.37e-07!21;UBERON:0000203!5.37e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.62e-12,73;UBERON:0001049,1.02e-11,52;UBERON:0005068,1.02e-11,52;UBERON:0006241,1.02e-11,52;UBERON:0007135,1.02e-11,52;UBERON:0001016,1.34e-11,75;UBERON:0003528,1.56e-11,29;UBERON:0002791,1.56e-11,29;UBERON:0001893,1.56e-11,29;UBERON:0002020,2.07e-11,34;UBERON:0002346,4.12e-11,64;UBERON:0003075,4.12e-11,64;UBERON:0007284,4.12e-11,64;UBERON:0002616,4.69e-11,46;UBERON:0000073,4.96e-11,54;UBERON:0000955,1.33e-10,47;UBERON:0006238,1.33e-10,47;UBERON:0004121,4.69e-10,95;UBERON:0000924,4.69e-10,95;UBERON:0006601,4.69e-10,95;UBERON:0000956,5.65e-09,21;UBERON:0001869,5.65e-09,21;UBERON:0000203,5.65e-09,21;UBERON:0007023,5.71e-09,51;UBERON:0010371,9.21e-09,73;UBERON:0011216,5.69e-08,194;UBERON:0003080,1.11e-07,40;UBERON:0000344,2.22e-07,15;UBERON:0002780,2.49e-07,39;UBERON:0001890,2.49e-07,39;UBERON:0006240,2.49e-07,39;UBERON:0003056,5.38e-07,49
|phase1_expression=0.480446541314382,2.79180326111489,2.72999543633722,2.72217790176147,3.00537437967808,1.17515490338323,1.40167584357315,0,0,0,0.513653904676515,0,0,0.262261207256992,0,0,0,0,0.137114433605739,0.42438965179803,0.595303031057488,0,0.261199789138935,2.87986361028132,3.21172993494038,3.44539178469012,0.86152399231815,1.50829862880122,1.90023419456374,2.77233142735924,0.443461021310609,0,0,0,0.866554859253824,1.32987716286794,0.612508068787107,0.418531630736908,0,0,0,0.683045484958446,0,1.1330713617802,0.608261587317087,0.550640256485045,3.12956537739216,1.30815093828268,0.659058548203415,0.777719596297134,0.55994568650145,2.87505128729943,0.167782606057736,0,0,0.514518872071894,0.573066879877513,0.515672092277442,1.01158230429799,2.64495489636016,1.90149421051854,0.338844532069132,0,0,1.97773272513395,0,2.39680088414724,2.30530983192933,3.11068836925433,3.24014251996058,4.6271491497304,1.14260393761521,1.32521124570968,2.08234358665422,1.91690942036473,1.83843757322004,0,0.893811366596314,2.30409799884365,1.45074916503213,1.9212405156506,1.56274011167028,1.95428099300967,1.12552522006336,1.22238598221448,0.294628585473668,0.996601765593721,1.4911955666024,0.605809546665472,0.68014404096107,0.869593466105033,0.860423876981386,2.03991400112325,3.77792234146472,0.649776417447669,3.58421509677868,1.40444420131752,0.681721290312231,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,1.02765491747154,0.517875767294343,0,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.705532242814229,0.753999547978053,1.97755974187499,0.86759614151947,1.76922110389975,0.485300549842228,0.441683036920787,0.969750506270444,1.86391761218122,3.80615036115011,2.51336048176146,1.78819938646014,0,0,0.127070227073065,1.3481157546434,1.37250180845588,0.376963056338593,1.21677024134594,1.27857728665165,1.24672826735736,0.973447578406546,0.611036183101898,0.248813941220186,0.252722758433675,2.31486041475121,0.780722657776222,0.689706313300419,0.720248519221397,0.753524089178575,0.680364991513279,0.384341160854549,1.12442069471675,2.84573707812917,0.862271971731369,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,0.348252166522167,1.02891068203972,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,0.656669856316381,1.13496333364198,0.730999937126662,0.658650345873152,0.939444931322602,1.89260953707715,4.11618449517138,5.94753809370836,1.58670339998127,0.213288250535234,0.464473343720877,0.644337306610467,1.00841762311671,0,0.570676878337677,2.37264530772256,0.823494773620054,1.50801125280162,0.397912944082302,0.974820435595601,1.79763881730844,1.51296634912286,1.7922714592893,0.379335801906163,0.114248512609729,1.1270773567308,0.203651327845314,0.775809948670503,0.49095073923223,0.822074982615345,1.32849133181642,1.41298855057237,0.863780147452604,2.37162101669719,0.333690211432188,0,0,0.202860121388503,0.964708639009667,0.25462585178142,0.287696137450811,0.810676133875177,0.549122826376163,0,0.372140947668503,1.5601883655728,0.757736633841335,1.61457672169721,0,0.923765950833023,0.37898282354097,0.814824882210129,0.678980343100753,0.469380496577004,0.502518772325447,1.42826184531608,0.585400943573396,1.10344600874334,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,1.50791283939272,0.54390568381871,0.491764273019036,1.10374698521893,1.28440471990234,2.57865710502847,0.655739781506702,1.00988370881749,0.94652465824877,1.17131623288992,1.29254038639679,0.716906393857656,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,1.18586333383957,0.963963949265421,0.567760340833074,0.712262414669021,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0.943025398779491,0.590603785761546,0.922305443831782,0,1.45413491791002,1.78248689192361,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.857348140126369,0.354680467284547,0,0.329098041204242,0,0.469343416127421,2.75381692122966,1.10264199027481,0.49465875882444,0,0.784068024066026,0.716234064018819,0.820704498725306,2.33184669303881,1.48340241608408,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0,0.279902904647316,0,3.81868247206045,0.632671987162271,0.203319467126849,0.648032044930808,0.627264888043406,0.87345025498471,0.674321731924103,0.743881101528023,2.09404753587224,0.518459893167171,0.621339313086926,0.56369293868419,0.598066184175915,0,0,1.29159823477731,0.337912250981556,0.821500670520278,0.5208175393758,1.36317147753424,0.966336483304024,1.15212002503146,0.316011120628178,0.608175645870493,0.410843828659309,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0,1.81384306892169,0.665957860122194,0.62799699626633,0.671538465456314,0.965947970160952,1.12609485270709,1.46521299413812,2.14368379079066,1.50471631210609,1.6942555278512,0,1.14579102687879,0.68741272937475,2.74033007908257,1.5107877947794,1.35004500046361,2.2516060161211,1.35942722695261,2.07104124700728,0.103787347584177,0.399024873401031,0.341467211508268,1.21553358534147,0.419226325255965,0.367687016900028,0.888986911206461,1.03017528619447,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,0.842773567228942,0.704276676453562,0.631790158511746,0,0.695305955669133,0.578727661391115,0,0.735994600671987,0.342869252385415,0.70990322463735,0.476872379894642,1.16277133305863,1.2234219453993,0.846146078916765,0,1.05227884575137,0.814824683075171,1.68342681497322,0.237270036248348,0.689531376628944,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,1.63752125911786,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p3@Zdhhc9
}}

Revision as of 07:17, 6 August 2015

Short description:p3@Zdhhc9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Zdhhc9_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_172465, uc009tbx.2_5end
EntrezGene:208884
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Zdhhc9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.42e-0923
neuroblast (sensu Vertebrata)4.42e-0923
embryonic cell1.10e-0770
neural cell2.13e-0743
ectodermal cell4.71e-0744
neurectodermal cell4.71e-0744

Uber anatomy
Ontology termp-valuen
central nervous system2.62e-1273
neural tube1.02e-1152
neural rod1.02e-1152
future spinal cord1.02e-1152
neural keel1.02e-1152
nervous system1.34e-1175
brain grey matter1.56e-1129
regional part of telencephalon1.56e-1129
telencephalon1.56e-1129
gray matter2.07e-1134
neurectoderm4.12e-1164
neural plate4.12e-1164
presumptive neural plate4.12e-1164
regional part of brain4.69e-1146
regional part of nervous system4.96e-1154
brain1.33e-1047
future brain1.33e-1047
ectoderm-derived structure4.69e-1095
ectoderm4.69e-1095
presumptive ectoderm4.69e-1095
cerebral cortex5.65e-0921
cerebral hemisphere5.65e-0921
pallium5.65e-0921
adult organism5.71e-0951
ecto-epithelium9.21e-0973
organ system subdivision5.69e-08194
anterior neural tube1.11e-0740
mucosa2.22e-0715
regional part of forebrain2.49e-0739
forebrain2.49e-0739
future forebrain2.49e-0739
pre-chordal neural plate5.38e-0749
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