FFCP PHASE1:Mm9::chr8:26213486..26213502,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=458 | |MCL_coexpression_id=458 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:26213486..26213502,- | |||
|description=CAGE_peak_at_chr8:26213486..26213502,- | |description=CAGE_peak_at_chr8:26213486..26213502,- | ||
|id=chr8:26213486..26213502,- | |id=chr8:26213486..26213502,- | ||
|ontology_enrichment_celltype=CL:0000838!3.65e-08!12;CL:0000988!6.81e-08!32;CL:0002032!6.81e-08!32;CL:0000037!6.81e-08!32;CL:0000566!6.81e-08!32;CL:0000837!6.81e-08!32;CL:0002031!1.26e-07!25;CL:0000542!2.38e-07!13;CL:0000051!2.38e-07!13;CL:0000791!4.88e-07!9;CL:0000789!4.88e-07!9;CL:0002420!4.88e-07!9;CL:0002419!4.88e-07!9;CL:0000790!4.88e-07!9;CL:0000084!5.52e-07!11;CL:0000827!5.52e-07!11 | |ontology_enrichment_celltype=CL:0000838!3.65e-08!12;CL:0000988!6.81e-08!32;CL:0002032!6.81e-08!32;CL:0000037!6.81e-08!32;CL:0000566!6.81e-08!32;CL:0000837!6.81e-08!32;CL:0002031!1.26e-07!25;CL:0000542!2.38e-07!13;CL:0000051!2.38e-07!13;CL:0000791!4.88e-07!9;CL:0000789!4.88e-07!9;CL:0002420!4.88e-07!9;CL:0002419!4.88e-07!9;CL:0000790!4.88e-07!9;CL:0000084!5.52e-07!11;CL:0000827!5.52e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.11e-11,12;CL:0000542,2.33e-10,13;CL:0000051,2.33e-10,13;CL:0002031,6.99e-10,25;CL:0000791,8.67e-10,9;CL:0000789,8.67e-10,9;CL:0002420,8.67e-10,9;CL:0002419,8.67e-10,9;CL:0000790,8.67e-10,9;CL:0000084,4.91e-08,11;CL:0000827,4.91e-08,11;CL:0000738,7.00e-08,17;CL:0002087,7.00e-08,17;CL:0000068,1.39e-07,3;CL:0002202,1.39e-07,3;CL:0000069,1.39e-07,3;CL:0002632,1.39e-07,3;CL:0002368,1.39e-07,3;CL:0000307,1.39e-07,3;CL:0000377,1.39e-07,3;CL:0000988,1.46e-07,32;CL:0002032,1.46e-07,32;CL:0000037,1.46e-07,32;CL:0000837,1.46e-07,32;CL:0000945,5.73e-07,1;CL:0000236,5.73e-07,1;CL:0000826,5.73e-07,1;CL:0000625,7.38e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.08e-16,3;DOID:4045,8.08e-16,3;DOID:0050686,3.47e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.82e-13!48;UBERON:0000072!3.48e-13!27;UBERON:0002390!3.00e-11!45;UBERON:0003061!3.00e-11!45;UBERON:0004177!3.05e-11!29;UBERON:0002370!3.89e-11!23;UBERON:0000974!3.89e-11!23;UBERON:0004807!3.89e-11!23;UBERON:0005058!3.89e-11!23;UBERON:0003351!3.89e-11!23;UBERON:0009113!3.89e-11!23;UBERON:0003295!3.89e-11!23;UBERON:0009722!3.89e-11!23;UBERON:0005562!3.89e-11!23;UBERON:0007690!3.89e-11!23;UBERON:0006562!1.81e-10!24;UBERON:0003408!1.81e-10!24;UBERON:0001557!1.81e-10!24;UBERON:0001042!1.81e-10!24;UBERON:0008814!1.81e-10!24;UBERON:0009145!1.81e-10!24;UBERON:0000063!6.40e-10!35;UBERON:0002405!1.95e-07!70;UBERON:0000065!9.23e-07!41 | |ontology_enrichment_uberon=UBERON:0002193!1.82e-13!48;UBERON:0000072!3.48e-13!27;UBERON:0002390!3.00e-11!45;UBERON:0003061!3.00e-11!45;UBERON:0004177!3.05e-11!29;UBERON:0002370!3.89e-11!23;UBERON:0000974!3.89e-11!23;UBERON:0004807!3.89e-11!23;UBERON:0005058!3.89e-11!23;UBERON:0003351!3.89e-11!23;UBERON:0009113!3.89e-11!23;UBERON:0003295!3.89e-11!23;UBERON:0009722!3.89e-11!23;UBERON:0005562!3.89e-11!23;UBERON:0007690!3.89e-11!23;UBERON:0006562!1.81e-10!24;UBERON:0003408!1.81e-10!24;UBERON:0001557!1.81e-10!24;UBERON:0001042!1.81e-10!24;UBERON:0008814!1.81e-10!24;UBERON:0009145!1.81e-10!24;UBERON:0000063!6.40e-10!35;UBERON:0002405!1.95e-07!70;UBERON:0000065!9.23e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.39e-07,3;UBERON:0001005,1.39e-07,3;UBERON:0007196,1.39e-07,3;UBERON:0001558,1.39e-07,3 | |||
|phase1_expression=0,0.348975407639361,0,0.90739263392049,0,0.33575854382378,0.233612640595526,2.06597317506522,0.281577444303333,0.468129052643987,0,0,0.684802919724823,1.04904482902797,0.666219523631325,0.202475267389826,0,1.10411757875383,0.959801035240171,2.97072756258621,0,0.297872853602656,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0.204169356262369,1.25559489221072,1.5626706890476,1.0470474879476,1.76469446409304,2.73218193983378,1.94204141212461,0,0,0,0,0,0,0,0,0,9.06026072711776,8.70434570413613,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,1.26679932737549,1.01104889002957,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.359445373517761,0,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,1.5298058699447,0.839708713941948,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.389762468933385,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.504832249740738,0.533447646584999,0.302478555410522,0.292373642219257,0.288635524920988,0.818138315270983,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0.348975407639361,0,0.90739263392049,0,0.33575854382378,0.233612640595526,2.06597317506522,0.281577444303333,0.468129052643987,0,0,0.684802919724823,1.04904482902797,0.666219523631325,0.202475267389826,0,1.10411757875383,0.959801035240171,2.97072756258621,0,0.297872853602656,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0.204169356262369,1.25559489221072,1.5626706890476,1.0470474879476,1.76469446409304,2.73218193983378,1.94204141212461,0,0,0,0,0,0,0,0,0,9.06026072711776,8.70434570413613,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,1.26679932737549,1.01104889002957,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.359445373517761,0,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,1.5298058699447,0.839708713941948,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.389762468933385,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.504832249740738,0.533447646584999,0.302478555410522,0.292373642219257,0.288635524920988,0.818138315270983,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr8:26213486..26213502,- | |short_description=p@chr8:26213486..26213502,- | ||
}} | }} |
Latest revision as of 07:00, 6 August 2015
Short description: | p@chr8:26213486..26213502, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:26213486..26213502, - |
Coexpression cluster: | MCL_coexpression_mm9:458 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.11e-11 | 12 |
lymphocyte | 2.33e-10 | 13 |
common lymphoid progenitor | 2.33e-10 | 13 |
hematopoietic lineage restricted progenitor cell | 6.99e-10 | 25 |
mature alpha-beta T cell | 8.67e-10 | 9 |
alpha-beta T cell | 8.67e-10 | 9 |
immature T cell | 8.67e-10 | 9 |
mature T cell | 8.67e-10 | 9 |
immature alpha-beta T cell | 8.67e-10 | 9 |
T cell | 4.91e-08 | 11 |
pro-T cell | 4.91e-08 | 11 |
leukocyte | 7.00e-08 | 17 |
nongranular leukocyte | 7.00e-08 | 17 |
duct epithelial cell | 1.39e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.39e-07 | 3 |
branched duct epithelial cell | 1.39e-07 | 3 |
epithelial cell of lower respiratory tract | 1.39e-07 | 3 |
respiratory epithelial cell | 1.39e-07 | 3 |
tracheal epithelial cell | 1.39e-07 | 3 |
tracheoblast | 1.39e-07 | 3 |
hematopoietic cell | 1.46e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.46e-07 | 32 |
hematopoietic stem cell | 1.46e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.46e-07 | 32 |
lymphocyte of B lineage | 5.73e-07 | 1 |
B cell | 5.73e-07 | 1 |
pro-B cell | 5.73e-07 | 1 |
CD8-positive, alpha-beta T cell | 7.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.39e-07 | 3 |
respiratory airway | 1.39e-07 | 3 |
tracheobronchial tree | 1.39e-07 | 3 |
lower respiratory tract | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.08e-16 | 3 |
muscle cancer | 8.08e-16 | 3 |
organ system cancer | 3.47e-08 | 6 |