FFCP PHASE1:Mm9::chrX:163645903..163645995,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chrX:163645903..163645995,- to FFCP PHASE1:Mm9::chrX:163645903..163645995,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1466 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:163645903..163645995,- | |||
|description=CAGE_peak_at_chrX:163645903..163645995,- | |||
|id=chrX:163645903..163645995,- | |||
|ontology_enrichment_celltype=CL:0002371!1.83e-16!118;CL:0000144!1.33e-15!121;CL:0000012!1.33e-15!121;CL:0000548!9.00e-15!115;CL:0000004!9.00e-15!115;CL:0000255!9.00e-15!115;CL:0000723!1.30e-14!91;CL:0000048!1.30e-14!91;CL:0000034!8.13e-13!97;CL:0000055!5.40e-12!50;CL:0002319!8.04e-11!43;CL:0000221!2.23e-10!44;CL:0000133!2.23e-10!44;CL:0000117!3.55e-09!23;CL:0000337!3.55e-09!23;CL:0000393!6.31e-09!39;CL:0000211!6.31e-09!39;CL:0002321!1.16e-07!70;CL:0000220!1.16e-07!70;CL:0000540!1.36e-07!33;CL:0000047!1.36e-07!33;CL:0000031!1.36e-07!33;CL:0000404!1.36e-07!33;CL:0000219!2.25e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.97e-16,91;CL:0000048,5.97e-16,91;CL:0000034,8.19e-14,97;CL:0002319,5.12e-11,43;CL:0000221,1.45e-10,44;CL:0000133,1.45e-10,44;CL:0000117,2.64e-09,23;CL:0000337,2.64e-09,23;CL:0000393,4.35e-09,39;CL:0000211,4.35e-09,39;CL:0002321,1.36e-08,70;CL:0000219,2.22e-08,54;CL:0000540,9.85e-08,33;CL:0000047,9.85e-08,33;CL:0000031,9.85e-08,33;CL:0000404,9.85e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.37e-10!34;UBERON:0002791!5.06e-08!29;UBERON:0003528!5.06e-08!29;UBERON:0001893!5.06e-08!29;UBERON:0001017!5.45e-07!73;UBERON:0005743!5.45e-07!73;UBERON:0002371!5.59e-07!16;UBERON:0000073!6.08e-07!75;UBERON:0001016!6.08e-07!75;UBERON:0000956!6.36e-07!21;UBERON:0001869!6.36e-07!21;UBERON:0000203!6.36e-07!21;UBERON:0002204!8.21e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.41e-10,34;UBERON:0003528,3.93e-08,29;UBERON:0002791,3.93e-08,29;UBERON:0001893,3.93e-08,29;UBERON:0002371,4.53e-07,16;UBERON:0000956,5.16e-07,21;UBERON:0001869,5.16e-07,21;UBERON:0000203,5.16e-07,21;UBERON:0001017,5.27e-07,73;UBERON:0001016,5.87e-07,75;UBERON:0002204,7.73e-07,32 | |||
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| ||
|short_description=p@chrX:163645903..163645995,- | |||
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Latest revision as of 04:39, 6 August 2015
Short description: | p@chrX:163645903..163645995, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:163645903..163645995, - |
Coexpression cluster: | MCL_coexpression_mm9:1466 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.97e-16 | 91 |
multi fate stem cell | 5.97e-16 | 91 |
stem cell | 8.19e-14 | 97 |
neural cell | 5.12e-11 | 43 |
ectodermal cell | 1.45e-10 | 44 |
neurectodermal cell | 1.45e-10 | 44 |
CNS neuron (sensu Vertebrata) | 2.64e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.64e-09 | 23 |
electrically responsive cell | 4.35e-09 | 39 |
electrically active cell | 4.35e-09 | 39 |
embryonic cell | 1.36e-08 | 70 |
motile cell | 2.22e-08 | 54 |
neuron | 9.85e-08 | 33 |
neuronal stem cell | 9.85e-08 | 33 |
neuroblast | 9.85e-08 | 33 |
electrically signaling cell | 9.85e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.41e-10 | 34 |
brain grey matter | 3.93e-08 | 29 |
regional part of telencephalon | 3.93e-08 | 29 |
telencephalon | 3.93e-08 | 29 |
bone marrow | 4.53e-07 | 16 |
cerebral cortex | 5.16e-07 | 21 |
cerebral hemisphere | 5.16e-07 | 21 |
pallium | 5.16e-07 | 21 |
central nervous system | 5.27e-07 | 73 |
nervous system | 5.87e-07 | 75 |
musculoskeletal system | 7.73e-07 | 32 |