FFCP PHASE1:Mm9::chr3:145315325..145315341,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=636 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:145315325..145315341,+ | |||
|description=CAGE_peak_at_chr3:145315325..145315341,+ | |description=CAGE_peak_at_chr3:145315325..145315341,+ | ||
|id=chr3:145315325..145315341,+ | |id=chr3:145315325..145315341,+ | ||
|ontology_enrichment_celltype=CL:0002453!3.83e-07!8;CL:0000333!8.62e-07!10;CL:0000095!8.62e-07!10;CL:0000243!8.62e-07!10;CL:0000123!8.62e-07!10;CL:0000125!8.62e-07!10;CL:0000030!8.62e-07!10;CL:0000339!8.62e-07!10 | |ontology_enrichment_celltype=CL:0002453!3.83e-07!8;CL:0000333!8.62e-07!10;CL:0000095!8.62e-07!10;CL:0000243!8.62e-07!10;CL:0000123!8.62e-07!10;CL:0000125!8.62e-07!10;CL:0000030!8.62e-07!10;CL:0000339!8.62e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.06e-17,8;CL:0000128,3.87e-14,6;CL:0000126,3.87e-14,6;CL:0000127,3.87e-14,6;CL:0000333,7.91e-14,10;CL:0000095,7.91e-14,10;CL:0000243,7.91e-14,10;CL:0000123,7.91e-14,10;CL:0000125,7.91e-14,10;CL:0000030,7.91e-14,10;CL:0000339,7.91e-14,10;CL:0000680,1.88e-13,6;CL:0000187,1.88e-13,6;CL:0000056,1.88e-13,6;CL:0000222,2.11e-11,7;CL:0000355,1.14e-08,9;CL:0002494,7.28e-08,3;CL:0000737,7.28e-08,3;CL:0000746,7.28e-08,3;CL:0000513,7.28e-08,3;CL:0000219,7.67e-08,54;CL:0002293,2.90e-07,3;CL:0000192,3.34e-07,3;CL:0000359,3.34e-07,3;CL:0002539,3.34e-07,3;CL:0000514,3.34e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!9.00e-10!23;UBERON:0001009!9.00e-10!23;UBERON:0004872!9.86e-09!33;UBERON:0007100!2.00e-07!18;UBERON:0000948!2.00e-07!18;UBERON:0005498!2.00e-07!18;UBERON:0004140!2.00e-07!18;UBERON:0009881!2.00e-07!18;UBERON:0004141!2.00e-07!18;UBERON:0003084!2.00e-07!18;UBERON:0007005!2.00e-07!18;UBERON:0004139!2.00e-07!18;UBERON:0004291!2.00e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.14e-08,9;UBERON:0002036,1.14e-08,9;UBERON:0002385,1.14e-08,9;UBERON:0000486,1.14e-08,9;UBERON:0007503,1.14e-08,9;UBERON:0001015,1.14e-08,9;UBERON:0002329,1.14e-08,9;UBERON:0003082,1.14e-08,9;UBERON:0003059,1.14e-08,9;UBERON:0007282,1.14e-08,9;UBERON:0004290,1.14e-08,9;UBERON:0009618,1.14e-08,9;UBERON:0000383,1.03e-07,10;UBERON:0004535,2.05e-07,23;UBERON:0001009,2.05e-07,23;UBERON:0001135,3.34e-07,3;UBERON:0004237,3.34e-07,3;UBERON:0004695,3.34e-07,3;UBERON:0002111,3.34e-07,3;UBERON:0004178,3.34e-07,3;UBERON:0007524,6.20e-07,11;UBERON:0003077,6.20e-07,11;UBERON:0007285,6.20e-07,11 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9028013572429,4.76471576731718,5.68994931701213,11.7358701652206,33.7938992389692,37.7860234303292,35.5806715305939,8.67915814077248,20.125359011096,0,0,0,22.3815709351274,16.3324060765091,25.2679325215947,0,0,0,18.2976047317331,21.3430751066673,1.7997994345628,1.97773272513395,2.1314403448383,2.99600110518405,3.45796474789399,0,0,0,0,0,0,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.454357159999104,0.302286240427142,0.869593466105033,0,0,0,0,0,0.280888840263504,5.62420064507591,4.67614808285164,4.24007489412408,0.563373679106722,8.98285341900225,2.54805239706646,7.11066703153331,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0.452167921657868,0.352766121407114,0.251333182659351,0.741584903203122,0.433798070759735,0,0.647067399789637,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.712875546952214,0.497627882440372,0,0,0.260240885925407,0,0.540186389416048,0.452114453507145,1.08858398642125,0.512454881139399,0,0,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,1.0447564995665,1.64625709126355,0.199034266818493,0,0,0,1.65700618028402,0.234526059981096,0.720248245844059,0.473489471170421,0.787056926989615,1.23413690309903,0.465067889500816,1.87791380979733,1.86824547787471,0.987359099480883,0.656669856316381,0.648550476366846,0.292399974850665,0.439100230582101,0.402619256281115,0,0,0,0.264450566663544,1.49301775374664,1.16118335930219,0.38660238396628,0.605050573870028,0.22237804384487,0,0.949058123089023,1.31759163779209,0,0.198956472041151,0.19496408711912,0,0.648414149624083,0.398282546508734,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,1.40271639780637,0.505892296994058,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.488894929326078,0,0.234690248288502,0.670025029767263,0.238043640886014,0.390267295715598,0.630540576424764,0.8858587585951,0.956728611944923,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,1.47541450839008,0.504941854408746,1.57754109708128,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0,0.469343416127421,0.42366414172764,0,0.8244312647074,1.13025098687134,0.965006798850494,0.477489376012546,0.328281799490123,0.291480836629851,0,0,0.412773735926445,0.555583582109135,0,0.410082683163076,0,0,0,0,0,0.316335993581135,0.609958401380546,0.648032044930808,1.25452977608681,0.87345025498471,0.674321731924103,0.661227645802687,0,0.388844919875379,0,0,0.299033092087958,0,0.583353565032143,0.516639293910924,0,0.58678619322877,0.5208175393758,0.314578033277133,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0.179427713218951,0.167884616364078,0.386379188064381,1.87682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0.453142408984205,0,0.518936737920883,0,0.512200817262403,0.972426868273176,0.419226325255965,0.919217542250071,0.222246727801615,0.618105171716683,0,0.505394423527595,0,0.377252682772152,1.03005658216871,0.512201219238954,0.746661096422973,0.952587382566147,0.463537303779422,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.953744759789284,1.0174249164263,0.470546902076653,0.169229215783353,0.548783918618318,1.31534855718921,0.407412341537585,0,0.474540072496697,0.689531376628944,0.409231043169689,0.619747364743864,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,1.14772999241306,0.441182838239031,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9028013572429,4.76471576731718,5.68994931701213,11.7358701652206,33.7938992389692,37.7860234303292,35.5806715305939,8.67915814077248,20.125359011096,0,0,0,22.3815709351274,16.3324060765091,25.2679325215947,0,0,0,18.2976047317331,21.3430751066673,1.7997994345628,1.97773272513395,2.1314403448383,2.99600110518405,3.45796474789399,0,0,0,0,0,0,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.454357159999104,0.302286240427142,0.869593466105033,0,0,0,0,0,0.280888840263504,5.62420064507591,4.67614808285164,4.24007489412408,0.563373679106722,8.98285341900225,2.54805239706646,7.11066703153331,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0.452167921657868,0.352766121407114,0.251333182659351,0.741584903203122,0.433798070759735,0,0.647067399789637,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.712875546952214,0.497627882440372,0,0,0.260240885925407,0,0.540186389416048,0.452114453507145,1.08858398642125,0.512454881139399,0,0,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,1.0447564995665,1.64625709126355,0.199034266818493,0,0,0,1.65700618028402,0.234526059981096,0.720248245844059,0.473489471170421,0.787056926989615,1.23413690309903,0.465067889500816,1.87791380979733,1.86824547787471,0.987359099480883,0.656669856316381,0.648550476366846,0.292399974850665,0.439100230582101,0.402619256281115,0,0,0,0.264450566663544,1.49301775374664,1.16118335930219,0.38660238396628,0.605050573870028,0.22237804384487,0,0.949058123089023,1.31759163779209,0,0.198956472041151,0.19496408711912,0,0.648414149624083,0.398282546508734,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,1.40271639780637,0.505892296994058,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.488894929326078,0,0.234690248288502,0.670025029767263,0.238043640886014,0.390267295715598,0.630540576424764,0.8858587585951,0.956728611944923,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,1.47541450839008,0.504941854408746,1.57754109708128,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0,0.469343416127421,0.42366414172764,0,0.8244312647074,1.13025098687134,0.965006798850494,0.477489376012546,0.328281799490123,0.291480836629851,0,0,0.412773735926445,0.555583582109135,0,0.410082683163076,0,0,0,0,0,0.316335993581135,0.609958401380546,0.648032044930808,1.25452977608681,0.87345025498471,0.674321731924103,0.661227645802687,0,0.388844919875379,0,0,0.299033092087958,0,0.583353565032143,0.516639293910924,0,0.58678619322877,0.5208175393758,0.314578033277133,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0.179427713218951,0.167884616364078,0.386379188064381,1.87682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0.453142408984205,0,0.518936737920883,0,0.512200817262403,0.972426868273176,0.419226325255965,0.919217542250071,0.222246727801615,0.618105171716683,0,0.505394423527595,0,0.377252682772152,1.03005658216871,0.512201219238954,0.746661096422973,0.952587382566147,0.463537303779422,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.953744759789284,1.0174249164263,0.470546902076653,0.169229215783353,0.548783918618318,1.31534855718921,0.407412341537585,0,0.474540072496697,0.689531376628944,0.409231043169689,0.619747364743864,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,1.14772999241306,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr3:145315325..145315341,+ | |short_description=p@chr3:145315325..145315341,+ | ||
}} | }} |
Latest revision as of 04:38, 6 August 2015
Short description: | p@chr3:145315325..145315341, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:145315325..145315341, + |
Coexpression cluster: | MCL_coexpression_mm9:636 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.06e-17 | 8 |
oligodendrocyte | 3.87e-14 | 6 |
macroglial cell | 3.87e-14 | 6 |
astrocyte | 3.87e-14 | 6 |
migratory neural crest cell | 7.91e-14 | 10 |
neuron associated cell | 7.91e-14 | 10 |
glial cell (sensu Vertebrata) | 7.91e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 7.91e-14 | 10 |
glial cell | 7.91e-14 | 10 |
glioblast | 7.91e-14 | 10 |
glioblast (sensu Vertebrata) | 7.91e-14 | 10 |
muscle precursor cell | 1.88e-13 | 6 |
muscle cell | 1.88e-13 | 6 |
myoblast | 1.88e-13 | 6 |
mesodermal cell | 2.11e-11 | 7 |
multi-potent skeletal muscle stem cell | 1.14e-08 | 9 |
cardiocyte | 7.28e-08 | 3 |
striated muscle cell | 7.28e-08 | 3 |
cardiac muscle cell | 7.28e-08 | 3 |
cardiac muscle myoblast | 7.28e-08 | 3 |
motile cell | 7.67e-08 | 54 |
epithelial cell of thymus | 2.90e-07 | 3 |
smooth muscle cell | 3.34e-07 | 3 |
vascular associated smooth muscle cell | 3.34e-07 | 3 |
aortic smooth muscle cell | 3.34e-07 | 3 |
smooth muscle myoblast | 3.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.14e-08 | 9 |
striated muscle tissue | 1.14e-08 | 9 |
muscle tissue | 1.14e-08 | 9 |
multilaminar epithelium | 1.14e-08 | 9 |
epithelial vesicle | 1.14e-08 | 9 |
musculature | 1.14e-08 | 9 |
somite | 1.14e-08 | 9 |
myotome | 1.14e-08 | 9 |
presomitic mesoderm | 1.14e-08 | 9 |
presumptive segmental plate | 1.14e-08 | 9 |
dermomyotome | 1.14e-08 | 9 |
trunk paraxial mesoderm | 1.14e-08 | 9 |
musculature of body | 1.03e-07 | 10 |
cardiovascular system | 2.05e-07 | 23 |
circulatory system | 2.05e-07 | 23 |
smooth muscle tissue | 3.34e-07 | 3 |
blood vessel smooth muscle | 3.34e-07 | 3 |
arterial system smooth muscle | 3.34e-07 | 3 |
artery smooth muscle tissue | 3.34e-07 | 3 |
aorta smooth muscle tissue | 3.34e-07 | 3 |
dense mesenchyme tissue | 6.20e-07 | 11 |
paraxial mesoderm | 6.20e-07 | 11 |
presumptive paraxial mesoderm | 6.20e-07 | 11 |