FFCP PHASE1:Mm9::chr3:145315053..145315073,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=636 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:145315053..145315073,+ | |||
|description=CAGE_peak_at_chr3:145315053..145315073,+ | |description=CAGE_peak_at_chr3:145315053..145315073,+ | ||
|id=chr3:145315053..145315073,+ | |id=chr3:145315053..145315073,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.49e-10,6;CL:0000187,1.49e-10,6;CL:0000056,1.49e-10,6;CL:0002453,1.28e-09,8;CL:0000222,7.06e-09,7;CL:0000333,2.10e-07,10;CL:0000095,2.10e-07,10;CL:0000243,2.10e-07,10;CL:0000123,2.10e-07,10;CL:0000125,2.10e-07,10;CL:0000030,2.10e-07,10;CL:0000339,2.10e-07,10;CL:0000128,2.24e-07,6;CL:0000126,2.24e-07,6;CL:0000127,2.24e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.65e-09!33;UBERON:0004535!2.11e-07!23;UBERON:0001009!2.11e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.15e-07,14;UBERON:0000117,3.15e-07,14;UBERON:0000171,3.15e-07,14;UBERON:0000170,3.15e-07,14;UBERON:0005597,3.15e-07,14;UBERON:0000118,3.15e-07,14;UBERON:0000947,5.01e-07,4;UBERON:0001637,5.01e-07,4;UBERON:0004573,5.01e-07,4;UBERON:0003509,5.01e-07,4;UBERON:0004571,5.01e-07,4;UBERON:0010191,5.01e-07,4;UBERON:0004572,5.01e-07,4 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,3.75094645512204,5.68994931701213,0,8.50298109883741,9.22681967484782,7.58276606389705,1.67983705950435,7.18762821824858,0,0,0,13.6347501099052,4.58453503902011,6.70373719960675,0,0,0,4.40497891689872,0,0,0.988866362566974,0,2.09720077362883,1.53687322128622,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.832988126665025,0.377857800533928,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,2.55645483867087,2.85764605063156,3.18005617059306,0.14084341977668,2.56652954828636,2.54805239706646,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,0.742210695324124,0,0.304465478312141,0.461230994512117,0.904335843315735,0.587943535678524,0.251333182659351,4.44950941921873,1.87979163995885,0,1.45590164952668,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0,1.01839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.540186389416048,0.30140963567143,0.544291993210623,0.512454881139399,0.374806898238915,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.556094498451196,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,1.18372367792605,0.196764231747404,0.925602677324269,0.930135779001631,1.07309360559848,0.817357396570186,1.31647879930784,0.492502392237286,0.648550476366846,0.730999937126662,0.658650345873152,0.671032093801859,0.210289948564127,0,0,0.264450566663544,0.426576501070468,1.39342003116263,0.257734922644187,0.605050573870028,1.77902435075896,0.570676878337677,0.949058123089023,0.658795818896044,0.251335208800269,0.198956472041151,0.779856348476481,0.898819408654221,0,0,0.189667900953082,1.82797620175566,2.25415471346161,2.03651327845314,3.10323979468201,2.31448205638051,0.948548056863859,1.18088118383682,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0.575392274901621,0,0.549122826376163,1.43768206527355,0,0.624075346229121,0,0.179397413521912,0,0.923765950833023,1.13694847062291,0.162964976442026,0.678980343100753,0.938760993154008,2.1775813467436,1.90434912708811,1.95133647857799,3.31033802623001,2.21464689648775,3.82691444777969,1.80249646187312,0.863424909329478,1.59113964439663,0,0,0,0,0,0,1.96721934452011,0.504941854408746,0.631016438832513,1.56175497718655,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.567760340833074,0.534196811001766,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.754420319023592,0,1.53717573971964,1.03371317267288,0,0.356497378384721,0.948110273807448,0,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0,0.535106452806212,0.493647061806363,0.608929898229199,0.469343416127421,0.63549621259146,0.220528398054962,0.49465875882444,1.29171541356724,0.784068024066026,0.358117032009409,0.164140899745061,0,0,0.512612642393558,1.65109494370578,5.00025223898222,0.941842285023455,0.683471138605126,0.457556346413045,0,0,0,0,0.158167996790568,0.609958401380546,0.648032044930808,1.25452977608681,1.74690050996942,1.21377911746339,0.909188012978695,1.04702376793612,0.259229946583586,0,0,0.598066184175915,0.330916980914195,1.75006069509643,0.258319646955462,0.506868376472335,0.234714477291508,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0.443068581523732,0,0,0,0,0,0,0.453460767230423,0,0.0897138566094757,0,0,1.68914227906064,0.36630324853453,0.857473516316263,0,0,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0.675022500231806,0.45032120322422,1.35942722695261,0,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.919217542250071,0.222246727801615,1.64828045791115,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.842773567228942,0.576226371643824,0.631790158511746,0.476293691283074,0.579421629724277,0.192909220463705,0.412085900803307,1.32479028120958,0.685738504770831,1.24233064311536,0.953744759789284,0.581385666529314,0.564656282491984,1.09998990259179,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,1.18635018124174,0.197008964751127,0.818462086339379,0.619747364743864,0.385813221962283,0,0.701794825336225,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,3.75094645512204,5.68994931701213,0,8.50298109883741,9.22681967484782,7.58276606389705,1.67983705950435,7.18762821824858,0,0,0,13.6347501099052,4.58453503902011,6.70373719960675,0,0,0,4.40497891689872,0,0,0.988866362566974,0,2.09720077362883,1.53687322128622,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.832988126665025,0.377857800533928,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,2.55645483867087,2.85764605063156,3.18005617059306,0.14084341977668,2.56652954828636,2.54805239706646,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,0.742210695324124,0,0.304465478312141,0.461230994512117,0.904335843315735,0.587943535678524,0.251333182659351,4.44950941921873,1.87979163995885,0,1.45590164952668,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0,1.01839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.540186389416048,0.30140963567143,0.544291993210623,0.512454881139399,0.374806898238915,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.556094498451196,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,1.18372367792605,0.196764231747404,0.925602677324269,0.930135779001631,1.07309360559848,0.817357396570186,1.31647879930784,0.492502392237286,0.648550476366846,0.730999937126662,0.658650345873152,0.671032093801859,0.210289948564127,0,0,0.264450566663544,0.426576501070468,1.39342003116263,0.257734922644187,0.605050573870028,1.77902435075896,0.570676878337677,0.949058123089023,0.658795818896044,0.251335208800269,0.198956472041151,0.779856348476481,0.898819408654221,0,0,0.189667900953082,1.82797620175566,2.25415471346161,2.03651327845314,3.10323979468201,2.31448205638051,0.948548056863859,1.18088118383682,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0.575392274901621,0,0.549122826376163,1.43768206527355,0,0.624075346229121,0,0.179397413521912,0,0.923765950833023,1.13694847062291,0.162964976442026,0.678980343100753,0.938760993154008,2.1775813467436,1.90434912708811,1.95133647857799,3.31033802623001,2.21464689648775,3.82691444777969,1.80249646187312,0.863424909329478,1.59113964439663,0,0,0,0,0,0,1.96721934452011,0.504941854408746,0.631016438832513,1.56175497718655,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.567760340833074,0.534196811001766,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.754420319023592,0,1.53717573971964,1.03371317267288,0,0.356497378384721,0.948110273807448,0,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0,0.535106452806212,0.493647061806363,0.608929898229199,0.469343416127421,0.63549621259146,0.220528398054962,0.49465875882444,1.29171541356724,0.784068024066026,0.358117032009409,0.164140899745061,0,0,0.512612642393558,1.65109494370578,5.00025223898222,0.941842285023455,0.683471138605126,0.457556346413045,0,0,0,0,0.158167996790568,0.609958401380546,0.648032044930808,1.25452977608681,1.74690050996942,1.21377911746339,0.909188012978695,1.04702376793612,0.259229946583586,0,0,0.598066184175915,0.330916980914195,1.75006069509643,0.258319646955462,0.506868376472335,0.234714477291508,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0.443068581523732,0,0,0,0,0,0,0.453460767230423,0,0.0897138566094757,0,0,1.68914227906064,0.36630324853453,0.857473516316263,0,0,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0.675022500231806,0.45032120322422,1.35942722695261,0,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.919217542250071,0.222246727801615,1.64828045791115,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.842773567228942,0.576226371643824,0.631790158511746,0.476293691283074,0.579421629724277,0.192909220463705,0.412085900803307,1.32479028120958,0.685738504770831,1.24233064311536,0.953744759789284,0.581385666529314,0.564656282491984,1.09998990259179,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,1.18635018124174,0.197008964751127,0.818462086339379,0.619747364743864,0.385813221962283,0,0.701794825336225,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr3:145315053..145315073,+ | |short_description=p@chr3:145315053..145315073,+ | ||
}} | }} |
Latest revision as of 04:38, 6 August 2015
Short description: | p@chr3:145315053..145315073, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:145315053..145315073, + |
Coexpression cluster: | MCL_coexpression_mm9:636 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.49e-10 | 6 |
muscle cell | 1.49e-10 | 6 |
myoblast | 1.49e-10 | 6 |
oligodendrocyte precursor cell | 1.28e-09 | 8 |
mesodermal cell | 7.06e-09 | 7 |
migratory neural crest cell | 2.10e-07 | 10 |
neuron associated cell | 2.10e-07 | 10 |
glial cell (sensu Vertebrata) | 2.10e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.10e-07 | 10 |
glial cell | 2.10e-07 | 10 |
glioblast | 2.10e-07 | 10 |
glioblast (sensu Vertebrata) | 2.10e-07 | 10 |
oligodendrocyte | 2.24e-07 | 6 |
macroglial cell | 2.24e-07 | 6 |
astrocyte | 2.24e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung | 3.15e-07 | 14 |
respiratory tube | 3.15e-07 | 14 |
respiration organ | 3.15e-07 | 14 |
pair of lungs | 3.15e-07 | 14 |
lung primordium | 3.15e-07 | 14 |
lung bud | 3.15e-07 | 14 |
aorta | 5.01e-07 | 4 |
artery | 5.01e-07 | 4 |
systemic artery | 5.01e-07 | 4 |
arterial blood vessel | 5.01e-07 | 4 |
systemic arterial system | 5.01e-07 | 4 |
aortic system | 5.01e-07 | 4 |
arterial system | 5.01e-07 | 4 |