FFCP PHASE1:Mm9::chr1:90456476..90456498,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:90456476..90456498,+ to FFCP PHASE1:Mm9::chr1:90456476..90456498,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=99 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:90456476..90456498,+ | |||
|description=CAGE_peak_at_chr1:90456476..90456498,+ | |||
|id=chr1:90456476..90456498,+ | |||
|ontology_enrichment_celltype=CL:0000068!2.98e-19!3;CL:0002202!2.98e-19!3;CL:0000069!2.98e-19!3;CL:0002632!2.98e-19!3;CL:0002368!2.98e-19!3;CL:0000307!2.98e-19!3;CL:0000377!2.98e-19!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.04e-65,3;CL:0002202,6.04e-65,3;CL:0000069,6.04e-65,3;CL:0002632,6.04e-65,3;CL:0002368,6.04e-65,3;CL:0000307,6.04e-65,3;CL:0000377,6.04e-65,3;CL:0000223,3.40e-18,20;CL:0000066,9.61e-15,25;CL:0002076,7.25e-14,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!2.98e-19!3;UBERON:0001005!2.98e-19!3;UBERON:0007196!2.98e-19!3;UBERON:0001558!2.98e-19!3;UBERON:0005178!9.34e-09!17;UBERON:0005181!9.34e-09!17;UBERON:0002224!9.34e-09!17;UBERON:0000915!9.34e-09!17;UBERON:0008947!9.34e-09!17;UBERON:0003258!9.34e-09!17;UBERON:0000993!2.79e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.04e-65,3;UBERON:0001005,6.04e-65,3;UBERON:0007196,6.04e-65,3;UBERON:0001558,6.04e-65,3;UBERON:0005178,2.40e-12,17;UBERON:0005181,2.40e-12,17;UBERON:0002224,2.40e-12,17;UBERON:0000915,2.40e-12,17;UBERON:0008947,2.40e-12,17;UBERON:0003258,2.40e-12,17;UBERON:0000072,4.25e-08,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.319312008986,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,2.53359865475099,3.53867111510348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.319312008986,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,2.53359865475099,3.53867111510348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr1:90456476..90456498,+ | |||
}} | }} |
Latest revision as of 04:27, 6 August 2015
Short description: | p@chr1:90456476..90456498, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:90456476..90456498, + |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.04e-65 | 3 |
epithelial cell of tracheobronchial tree | 6.04e-65 | 3 |
branched duct epithelial cell | 6.04e-65 | 3 |
epithelial cell of lower respiratory tract | 6.04e-65 | 3 |
respiratory epithelial cell | 6.04e-65 | 3 |
tracheal epithelial cell | 6.04e-65 | 3 |
tracheoblast | 6.04e-65 | 3 |
endodermal cell | 3.40e-18 | 20 |
epithelial cell | 9.61e-15 | 25 |
endo-epithelial cell | 7.25e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.04e-65 | 3 |
respiratory airway | 6.04e-65 | 3 |
tracheobronchial tree | 6.04e-65 | 3 |
lower respiratory tract | 6.04e-65 | 3 |
thoracic cavity element | 2.40e-12 | 17 |
thoracic segment organ | 2.40e-12 | 17 |
thoracic cavity | 2.40e-12 | 17 |
thoracic segment of trunk | 2.40e-12 | 17 |
respiratory primordium | 2.40e-12 | 17 |
endoderm of foregut | 2.40e-12 | 17 |
segment of respiratory tract | 4.25e-08 | 27 |