FFCP PHASE1:Mm9::chr18:7868821..7868860,+: Difference between revisions
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{{FFCP|EntrezGene=225131|HGNC=|MCL_coexpression_id=1260|UniProt=Q924H7,E9Q6U6,E9Q4Y9|association_with_transcript=0bp_to_ENSMUST00000074919,ENSMUST00000166378,ENSMUST00000171042,NR_027465,uc008eab.2,uc008eac.2_5end|description=CAGE_peak_1_at_Wac_5end|id=chr18:7868821..7868860,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.13e-20!94;UBERON:0007811!5.23e-18!86;UBERON:0000033!7.20e-17!63;UBERON:0003056!5.16e-16!49;UBERON:0002346!1.40e-15!71;UBERON:0003075!1.40e-15!71;UBERON:0007284!1.40e-15!71;UBERON:0000955!3.26e-15!50;UBERON:0006238!3.26e-15!50;UBERON:0002616!1.29e-14!49;UBERON:0001049!1.57e-14!52;UBERON:0005068!1.57e-14!52;UBERON:0006241!1.57e-14!52;UBERON:0007135!1.57e-14!52;UBERON:0003080!3.12e-13!40;UBERON:0001017!3.53e-13!73;UBERON:0005743!3.53e-13!73;UBERON:0002780!1.20e-12!39;UBERON:0001890!1.20e-12!39;UBERON:0006240!1.20e-12!39;UBERON:0000073!5.42e-12!75;UBERON:0001016!5.42e-12!75;UBERON:0002020!1.35e-11!34;UBERON:0002791!7.14e-11!29;UBERON:0003528!7.14e-11!29;UBERON:0001893!7.14e-11!29;UBERON:0004121!1.29e-10!102;UBERON:0000924!1.29e-10!102;UBERON:0006601!1.29e-10!102;UBERON:0002021!8.61e-08!10;UBERON:0000411!8.61e-08!10;UBERON:0001950!8.61e-08!10;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.18e-17,64;UBERON:0003075,2.18e-17,64;UBERON:0007284,2.18e-17,64;UBERON:0003056,5.16e-16,49;UBERON:0000073,1.63e-15,54;UBERON:0010371,1.14e-14,73;UBERON:0001049,1.57e-14,52;UBERON:0005068,1.57e-14,52;UBERON:0006241,1.57e-14,52;UBERON:0007135,1.57e-14,52;UBERON:0000955,9.02e-14,47;UBERON:0006238,9.02e-14,47;UBERON:0003080,3.12e-13,40;UBERON:0002616,3.45e-13,46;UBERON:0001017,3.53e-13,73;UBERON:0010314,8.04e-13,92;UBERON:0002780,1.20e-12,39;UBERON:0001890,1.20e-12,39;UBERON:0006240,1.20e-12,39;UBERON:0001016,5.42e-12,75;UBERON:0002020,1.35e-11,34;UBERON:0004121,1.78e-11,95;UBERON:0000924,1.78e-11,95;UBERON:0006601,1.78e-11,95;UBERON:0003528,7.14e-11,29;UBERON:0002791,7.14e-11,29;UBERON:0001893,7.14e-11,29;UBERON:0002021,8.61e-08,10;UBERON:0000411,8.61e-08,10;UBERON:0001950,8.61e-08,10;UBERON:0000956,1.06e-07,21;UBERON:0001869,1.06e-07,21;UBERON:0000203,1.06e-07,21|phase1_expression=18.0968197228417,3.48975407639361,2.27499619694768,7.86406949397758,5.50985302940982,6.5472916045637,6.54115393667472,17.4316486646128,64.3404460233117,53.3667120014145,23.7992975833452,23.0541539496522,22.9408978107816,22.2922026168443,8.66085380720723,9.31386229993199,9.09430441566591,20.9782339963228,21.526966076101,14.8536378129311,14.5424026158329,12.113496046508,9.14199261986274,4.63978026100879,4.5881856213434,3.44539178469012,3.01533397311352,3.23206849028834,4.18051522804023,3.02436155711917,2.88249663851896,3.81018404075779,2.46025915033828,0,6.35473563452804,6.15068187826422,7.14592746918292,4.18531630736908,7.0320181007142,5.75876118371178,2.35292595212406,5.46436387966757,7.76816564849846,5.16176953699867,5.17022349219524,4.77221555620372,4.69434806608824,1.30815093828268,1.97717564461025,2.91644848611425,2.93971485413261,1.43752564364972,20.6372605451016,25.3876749703971,29.2401605253944,7.46052364504246,9.74213695791773,6.18806510732931,19.0177473208022,20.1016572123373,8.87363964908651,1.35537812827653,3.55717918444456,1.7997994345628,1.97773272513395,1.4209602298922,3.29560121570245,3.07374644257244,26.2334719140448,19.5758610580951,16.8259969081106,14.8538511889978,12.3686382932904,24.2531782445609,18.0189485514284,17.4651569455904,24.2254938198655,26.9420283359746,24.8842583875114,23.6076455037047,23.6038120494217,28.6502353806218,18.4260779340911,20.8222165711722,27.8092810953794,26.5165726926301,26.9082476710305,26.2823218613674,7.04253597998612,6.57472572929034,20.2905142091174,6.0229671388697,6.11974200336975,9.17495425784289,7.14754059192436,8.51251085484938,7.44355426698285,6.30592193538814,5.45550609666024,5.3000936176551,15.7744630149882,8.98285341900225,2.54805239706646,7.11066703153331,9.09262372247099,8.86759529162845,6.57181778519218,10.9616524530298,37.0281173615456,15.5864246018066,9.88866362566974,13.0920155674221,14.2981608298756,12.0578112442098,18.1086608988985,12.4409925416379,7.41584903203122,15.7613299042704,6.19227386364912,13.1031148457401,10.6003928860989,13.091631834651,11.1835056730873,29.8636412951778,27.4375185925626,7.66371165625774,13.1796636956512,6.59893004092748,10.0385479387721,33.1037313084658,23.7900313465686,38.0732686901979,32.1574992355711,37.5901722275586,34.0772393077679,31.7992875612805,23.9322505048243,13.6847667671102,10.867078612648,18.7293251738962,21.3397526458834,18.8519725635448,23.9482632641114,19.4409215008072,25.10546818684,18.1921482804487,20.052169055782,28.9747775227698,21.5567992932842,26.0966390631591,27.2724242454121,17.9740500590611,24.190110682627,18.4573648256748,12.9642745937004,17.9130840136644,10.5331978096985,5.91900186363845,9.66155897945015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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:225131 | |||
|HGNC= | |||
|MCL_coexpression_id=1260 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q924H7,uniprot:E9Q6U6,uniprot:E9Q4Y9 | |||
|association_with_transcript=0bp_to_ENSMUST00000074919,ENSMUST00000166378,ENSMUST00000171042,NR_027465,uc008eab.2,uc008eac.2_5end | |||
|cluster_id=chr18:7868821..7868860,+ | |||
|description=CAGE_peak_1_at_Wac_5end | |||
|id=chr18:7868821..7868860,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.13e-20!94;UBERON:0007811!5.23e-18!86;UBERON:0000033!7.20e-17!63;UBERON:0003056!5.16e-16!49;UBERON:0002346!1.40e-15!71;UBERON:0003075!1.40e-15!71;UBERON:0007284!1.40e-15!71;UBERON:0000955!3.26e-15!50;UBERON:0006238!3.26e-15!50;UBERON:0002616!1.29e-14!49;UBERON:0001049!1.57e-14!52;UBERON:0005068!1.57e-14!52;UBERON:0006241!1.57e-14!52;UBERON:0007135!1.57e-14!52;UBERON:0003080!3.12e-13!40;UBERON:0001017!3.53e-13!73;UBERON:0005743!3.53e-13!73;UBERON:0002780!1.20e-12!39;UBERON:0001890!1.20e-12!39;UBERON:0006240!1.20e-12!39;UBERON:0000073!5.42e-12!75;UBERON:0001016!5.42e-12!75;UBERON:0002020!1.35e-11!34;UBERON:0002791!7.14e-11!29;UBERON:0003528!7.14e-11!29;UBERON:0001893!7.14e-11!29;UBERON:0004121!1.29e-10!102;UBERON:0000924!1.29e-10!102;UBERON:0006601!1.29e-10!102;UBERON:0002021!8.61e-08!10;UBERON:0000411!8.61e-08!10;UBERON:0001950!8.61e-08!10;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.18e-17,64;UBERON:0003075,2.18e-17,64;UBERON:0007284,2.18e-17,64;UBERON:0003056,5.16e-16,49;UBERON:0000073,1.63e-15,54;UBERON:0010371,1.14e-14,73;UBERON:0001049,1.57e-14,52;UBERON:0005068,1.57e-14,52;UBERON:0006241,1.57e-14,52;UBERON:0007135,1.57e-14,52;UBERON:0000955,9.02e-14,47;UBERON:0006238,9.02e-14,47;UBERON:0003080,3.12e-13,40;UBERON:0002616,3.45e-13,46;UBERON:0001017,3.53e-13,73;UBERON:0010314,8.04e-13,92;UBERON:0002780,1.20e-12,39;UBERON:0001890,1.20e-12,39;UBERON:0006240,1.20e-12,39;UBERON:0001016,5.42e-12,75;UBERON:0002020,1.35e-11,34;UBERON:0004121,1.78e-11,95;UBERON:0000924,1.78e-11,95;UBERON:0006601,1.78e-11,95;UBERON:0003528,7.14e-11,29;UBERON:0002791,7.14e-11,29;UBERON:0001893,7.14e-11,29;UBERON:0002021,8.61e-08,10;UBERON:0000411,8.61e-08,10;UBERON:0001950,8.61e-08,10;UBERON:0000956,1.06e-07,21;UBERON:0001869,1.06e-07,21;UBERON:0000203,1.06e-07,21 | |||
|phase1_expression=18.0968197228417,3.48975407639361,2.27499619694768,7.86406949397758,5.50985302940982,6.5472916045637,6.54115393667472,17.4316486646128,64.3404460233117,53.3667120014145,23.7992975833452,23.0541539496522,22.9408978107816,22.2922026168443,8.66085380720723,9.31386229993199,9.09430441566591,20.9782339963228,21.526966076101,14.8536378129311,14.5424026158329,12.113496046508,9.14199261986274,4.63978026100879,4.5881856213434,3.44539178469012,3.01533397311352,3.23206849028834,4.18051522804023,3.02436155711917,2.88249663851896,3.81018404075779,2.46025915033828,0,6.35473563452804,6.15068187826422,7.14592746918292,4.18531630736908,7.0320181007142,5.75876118371178,2.35292595212406,5.46436387966757,7.76816564849846,5.16176953699867,5.17022349219524,4.77221555620372,4.69434806608824,1.30815093828268,1.97717564461025,2.91644848611425,2.93971485413261,1.43752564364972,20.6372605451016,25.3876749703971,29.2401605253944,7.46052364504246,9.74213695791773,6.18806510732931,19.0177473208022,20.1016572123373,8.87363964908651,1.35537812827653,3.55717918444456,1.7997994345628,1.97773272513395,1.4209602298922,3.29560121570245,3.07374644257244,26.2334719140448,19.5758610580951,16.8259969081106,14.8538511889978,12.3686382932904,24.2531782445609,18.0189485514284,17.4651569455904,24.2254938198655,26.9420283359746,24.8842583875114,23.6076455037047,23.6038120494217,28.6502353806218,18.4260779340911,20.8222165711722,27.8092810953794,26.5165726926301,26.9082476710305,26.2823218613674,7.04253597998612,6.57472572929034,20.2905142091174,6.0229671388697,6.11974200336975,9.17495425784289,7.14754059192436,8.51251085484938,7.44355426698285,6.30592193538814,5.45550609666024,5.3000936176551,15.7744630149882,8.98285341900225,2.54805239706646,7.11066703153331,9.09262372247099,8.86759529162845,6.57181778519218,10.9616524530298,37.0281173615456,15.5864246018066,9.88866362566974,13.0920155674221,14.2981608298756,12.0578112442098,18.1086608988985,12.4409925416379,7.41584903203122,15.7613299042704,6.19227386364912,13.1031148457401,10.6003928860989,13.091631834651,11.1835056730873,29.8636412951778,27.4375185925626,7.66371165625774,13.1796636956512,6.59893004092748,10.0385479387721,33.1037313084658,23.7900313465686,38.0732686901979,32.1574992355711,37.5901722275586,34.0772393077679,31.7992875612805,23.9322505048243,13.6847667671102,10.867078612648,18.7293251738962,21.3397526458834,18.8519725635448,23.9482632641114,19.4409215008072,25.10546818684,18.1921482804487,20.052169055782,28.9747775227698,21.5567992932842,26.0966390631591,27.2724242454121,17.9740500590611,24.190110682627,18.4573648256748,12.9642745937004,17.9130840136644,10.5331978096985,5.91900186363845,9.66155897945015,16.7771875753757,13.3679854189225,18.3663302690235,22.0172604094246,16.7249596985293,17.7407179820485,13.7195027402741,14.7550370769791,18.0986280669113,16.1268652915211,12.9692296622485,15.0787985755292,10.5263990946239,12.953456802172,14.8969124824013,39.1139304329277,38.1776111927145,10.2429822724977,3.96675849995316,23.4617075588757,22.2947204986021,20.8765287341791,13.3111126251406,12.008414367623,15.0278244628922,6.16887780007865,11.1995289212327,12.8180956488137,12.9321706826748,13.6474860983384,13.4822911298133,8.64552199498777,8.56307474993779,12.1387456609972,16.9087798662399,11.270773567308,13.4409876377907,12.2190066915604,16.5520534941152,16.4414996523069,16.3847264257358,12.8738956829927,9.74837594982224,8.30067355844017,10.3443965543978,12.579775687245,8.31989815823959,10.1430060694251,9.64708639009667,7.89340140522401,11.7955416354832,8.2688965655268,6.31491250332587,12.9391385874619,12.2806512730606,11.5453939052387,9.09283960609602,8.61107584905178,13.5084185981743,13.8564892624954,18.9491411770485,18.0891123850649,14.7678224624414,13.6120344007331,17.4206507739488,16.4250112211349,18.5376965464909,20.8078390220172,16.8313164133069,24.3965796045955,17.3695113598682,17.7865531321872,15.6220983268033,16.5870412333199,11.4220193601929,7.37646409528554,8.00216564283724,24.72479085812,26.4898411698379,9.67216177722385,14.3908428506493,17.6684602873104,14.055794794679,18.0955654095551,14.3381278771531,15.5959071857676,18.1168979704853,16.5972387686707,16.9508397588561,18.9738133414331,34.0600595407115,17.0328102249922,12.6426578603751,23.6186091062685,17.1568927891437,13.2745138339963,13.110154352369,7.25576536715402,10.3732793865744,5.31543407185391,14.1420168054207,12.4045580720746,9.81541069589265,11.4079161083111,9.16506598013866,14.7586052004998,3.09406629744561,23.8307724027652,21.0671480016633,12.1597162755789,16.0752776273694,23.7635913080647,19.7989387538298,19.9104314928566,15.22324745573,5.39744928546534,5.93129798418696,13.4522322813527,14.1802177529673,18.0840157899414,12.9069659346254,11.1016279922917,9.52017218521355,11.3677526285642,24.4761398653873,9.7396402054776,15.4790150972417,11.6672552242918,10.9253705062721,14.0795054552656,11.6676868335327,24.9868292090967,20.1530091346068,21.6973958872945,12.4107180341965,21.1945115699361,20.53526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| |||
|short_description=p1@Wac | |||
}} |
Revision as of 04:04, 6 August 2015
Short description: | p1@Wac |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wac_5end |
Coexpression cluster: | MCL_coexpression_mm9:1260 |
Association with transcript: | 0bp_to_ENSMUST00000074919, ENSMUST00000166378, ENSMUST00000171042, NR_027465, uc008eab.2, uc008eac.2_5end |
EntrezGene: | 225131 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.18e-17 | 64 |
neural plate | 2.18e-17 | 64 |
presumptive neural plate | 2.18e-17 | 64 |
pre-chordal neural plate | 5.16e-16 | 49 |
regional part of nervous system | 1.63e-15 | 54 |
ecto-epithelium | 1.14e-14 | 73 |
neural tube | 1.57e-14 | 52 |
neural rod | 1.57e-14 | 52 |
future spinal cord | 1.57e-14 | 52 |
neural keel | 1.57e-14 | 52 |
brain | 9.02e-14 | 47 |
future brain | 9.02e-14 | 47 |
anterior neural tube | 3.12e-13 | 40 |
regional part of brain | 3.45e-13 | 46 |
central nervous system | 3.53e-13 | 73 |
structure with developmental contribution from neural crest | 8.04e-13 | 92 |
regional part of forebrain | 1.20e-12 | 39 |
forebrain | 1.20e-12 | 39 |
future forebrain | 1.20e-12 | 39 |
nervous system | 5.42e-12 | 75 |
gray matter | 1.35e-11 | 34 |
ectoderm-derived structure | 1.78e-11 | 95 |
ectoderm | 1.78e-11 | 95 |
presumptive ectoderm | 1.78e-11 | 95 |
brain grey matter | 7.14e-11 | 29 |
regional part of telencephalon | 7.14e-11 | 29 |
telencephalon | 7.14e-11 | 29 |
occipital lobe | 8.61e-08 | 10 |
visual cortex | 8.61e-08 | 10 |
neocortex | 8.61e-08 | 10 |
cerebral cortex | 1.06e-07 | 21 |
cerebral hemisphere | 1.06e-07 | 21 |
pallium | 1.06e-07 | 21 |