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FFCP PHASE1:Mm9::chr16:18343975..18344025,-: Difference between revisions

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{{FFCP|EntrezGene=27883|HGNC=|UniProt=Q8BTN3,D3Z2V8|association_with_transcript=0bp_to_ENSMUST00000115628,ENSMUST00000130752,NM_138583,uc007ynj.1,uc007ynk.2_5end|description=CAGE_peak_1_at_D16H22S680E_5end|id=chr16:18343975..18344025,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.22e-11!114;UBERON:0004111!2.27e-10!122;UBERON:0000477!1.32e-09!154;UBERON:0002020!2.18e-09!34;UBERON:0001049!2.84e-09!52;UBERON:0005068!2.84e-09!52;UBERON:0006241!2.84e-09!52;UBERON:0007135!2.84e-09!52;UBERON:0002616!1.42e-08!49;UBERON:0000955!3.66e-08!50;UBERON:0006238!3.66e-08!50;UBERON:0002791!1.70e-07!29;UBERON:0003528!1.70e-07!29;UBERON:0001893!1.70e-07!29;UBERON:0001017!3.34e-07!73;UBERON:0005743!3.34e-07!73;UBERON:0000073!5.98e-07!75;UBERON:0001016!5.98e-07!75;UBERON:0002021!8.06e-07!10;UBERON:0000411!8.06e-07!10;UBERON:0001950!8.06e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.22e-11,114;UBERON:0000073,2.08e-10,54;UBERON:0004111,2.32e-10,122;UBERON:0011216,1.12e-09,194;UBERON:0002020,2.18e-09,34;UBERON:0001049,2.84e-09,52;UBERON:0005068,2.84e-09,52;UBERON:0006241,2.84e-09,52;UBERON:0007135,2.84e-09,52;UBERON:0003528,1.70e-07,29;UBERON:0002791,1.70e-07,29;UBERON:0001893,1.70e-07,29;UBERON:0001017,3.34e-07,73;UBERON:0002616,4.34e-07,46;UBERON:0001016,5.98e-07,75;UBERON:0002021,8.06e-07,10;UBERON:0000411,8.06e-07,10;UBERON:0001950,8.06e-07,10|phase1_expression=1.76163731815273,17.7977457896074,18.654968814971,18.1478526784098,17.0304548181758,5.37213670118047,5.13947809310157,4.00282302668886,0.703943610758334,0.70219357896598,0.68487187290202,0.638177271962691,2.39681021903688,4.37102012094987,9.32707333083856,5.26435695213547,8.39474253753776,3.62781490161973,3.70208970735495,2.97072756258621,5.86798702042381,1.58865521921416,2.08959831311148,7.51964387129011,6.8822784320151,14.9300310669905,9.04600191934057,11.8509177977239,7.22088993934221,4.78857246543868,5.09980174507201,2.54012269383853,1.84519436275371,15.8481681015439,3.75507105676657,2.65975432573588,3.26670970019791,4.60384793810598,3.906676722619,5.75876118371178,7.05877785637217,2.04913645487534,3.88408282424923,3.39921408534059,3.14268486780495,3.67093504323363,2.34717403304412,5.23260375313072,4.17403747195497,4.6663175777828,3.77963338388479,1.43752564364972,3.85899993932794,5.80289713609076,4.03312558970957,4.3734104126111,6.87680255853016,10.8291139378263,4.85559506063035,5.81890077199236,8.23980824558033,4.40497891689872,4.4464739805557,6.74924787961049,0.988866362566974,6.3943210345149,2.39680088414724,2.30530983192933,5.80661828927475,2.97013064329719,4.20649922702764,12.5686433137674,14.3564551618549,4.28717797252339,4.69642807989358,3.67687514644008,16.5173821499083,16.7270412891596,18.5863905240055,5.80299666012853,5.58074625974699,3.64639359389732,18.9844439320939,19.1339287410771,18.3357897332172,9.1334861496837,9.11178757114259,5.21918448310842,2.80186915332781,4.00529268565963,1.44932244350839,2.58127163094416,4.75979933595425,9.71465744948071,5.84798775702902,4.92829575807069,5.05599912474307,5.45377032249785,4.1565760736459,5.3000936176551,0.845060518660083,3.84979432242953,15.2883143823987,7.11066703153331,2.81438353314578,1.77351905832569,1.51657333504435,6.50848114398642,5.69663344023778,4.75014845007439,3.64319186208885,3.65358573974569,2.99800146432876,4.22023393547343,3.41007250693544,4.52399728786832,13.5957232253906,2.89198713839823,6.19227386364912,3.558870698843,4.85851340612866,4.84875253135222,5.59175283654366,4.9772735491963,5.65506108396329,4.59822699375465,1.1981512450592,3.59941638596045,1.52484272487678,15.1288545798871,4.57500602818627,2.63874139437015,13.3844726548053,12.2743419518559,11.2205544062162,10.2211995732687,2.85150218780886,4.85187185379363,2.0217820674694,2.10441855886474,1.56144531555244,2.29902104433473,2.70093194708024,3.61691562805716,3.60593445502038,3.33095672740609,3.93547243150861,2.58703370739016,1.29340795759705,0.756424320671277,1.75951124163949,1.97276159184817,3.05851974148158,2.78601733217733,2.88094990971121,1.99034266818493,2.1066395619397,1.54408744268829,1.42081749697796,2.48550927042602,2.34526059981096,3.96136535214233,4.02466050494857,3.34499193970586,4.62801338662135,4.18561100550734,5.633741429392,5.95503246072564,5.75959474697182,6.7308660272429,8.26901857367728,12.1345989563026,7.90380415047782,12.2127841071938,8.20130799400096,5.45394445610208,8.59088835757875,6.08236303326152,2.98603550749328,1.39342003116263,2.96395161040815,2.42020229548011,3.55804870151792,5.1360919050391,9.49058123089023,6.25856027951241,9.55073793441024,7.16243299348143,7.79856348476481,6.29173586057955,9.07779809473716,8.16479220342906,1.70701110857774,1.14248512609729,0,1.62921062276251,1.55161989734101,2.45475369616115,5.6280518040589,5.75679577120448,8.16393384775149,6.91024117962083,9.78293669387591,6.34011401721157,4.91397487783007,6.74586337154561,4.86864291332407,7.71766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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:27883
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8BTN3,uniprot:D3Z2V8
|association_with_transcript=0bp_to_ENSMUST00000115628,ENSMUST00000130752,NM_138583,uc007ynj.1,uc007ynk.2_5end
|cluster_id=chr16:18343975..18344025,-
|description=CAGE_peak_1_at_D16H22S680E_5end
|id=chr16:18343975..18344025,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!1.22e-11!114;UBERON:0004111!2.27e-10!122;UBERON:0000477!1.32e-09!154;UBERON:0002020!2.18e-09!34;UBERON:0001049!2.84e-09!52;UBERON:0005068!2.84e-09!52;UBERON:0006241!2.84e-09!52;UBERON:0007135!2.84e-09!52;UBERON:0002616!1.42e-08!49;UBERON:0000955!3.66e-08!50;UBERON:0006238!3.66e-08!50;UBERON:0002791!1.70e-07!29;UBERON:0003528!1.70e-07!29;UBERON:0001893!1.70e-07!29;UBERON:0001017!3.34e-07!73;UBERON:0005743!3.34e-07!73;UBERON:0000073!5.98e-07!75;UBERON:0001016!5.98e-07!75;UBERON:0002021!8.06e-07!10;UBERON:0000411!8.06e-07!10;UBERON:0001950!8.06e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.22e-11,114;UBERON:0000073,2.08e-10,54;UBERON:0004111,2.32e-10,122;UBERON:0011216,1.12e-09,194;UBERON:0002020,2.18e-09,34;UBERON:0001049,2.84e-09,52;UBERON:0005068,2.84e-09,52;UBERON:0006241,2.84e-09,52;UBERON:0007135,2.84e-09,52;UBERON:0003528,1.70e-07,29;UBERON:0002791,1.70e-07,29;UBERON:0001893,1.70e-07,29;UBERON:0001017,3.34e-07,73;UBERON:0002616,4.34e-07,46;UBERON:0001016,5.98e-07,75;UBERON:0002021,8.06e-07,10;UBERON:0000411,8.06e-07,10;UBERON:0001950,8.06e-07,10
|phase1_expression=1.76163731815273,17.7977457896074,18.654968814971,18.1478526784098,17.0304548181758,5.37213670118047,5.13947809310157,4.00282302668886,0.703943610758334,0.70219357896598,0.68487187290202,0.638177271962691,2.39681021903688,4.37102012094987,9.32707333083856,5.26435695213547,8.39474253753776,3.62781490161973,3.70208970735495,2.97072756258621,5.86798702042381,1.58865521921416,2.08959831311148,7.51964387129011,6.8822784320151,14.9300310669905,9.04600191934057,11.8509177977239,7.22088993934221,4.78857246543868,5.09980174507201,2.54012269383853,1.84519436275371,15.8481681015439,3.75507105676657,2.65975432573588,3.26670970019791,4.60384793810598,3.906676722619,5.75876118371178,7.05877785637217,2.04913645487534,3.88408282424923,3.39921408534059,3.14268486780495,3.67093504323363,2.34717403304412,5.23260375313072,4.17403747195497,4.6663175777828,3.77963338388479,1.43752564364972,3.85899993932794,5.80289713609076,4.03312558970957,4.3734104126111,6.87680255853016,10.8291139378263,4.85559506063035,5.81890077199236,8.23980824558033,4.40497891689872,4.4464739805557,6.74924787961049,0.988866362566974,6.3943210345149,2.39680088414724,2.30530983192933,5.80661828927475,2.97013064329719,4.20649922702764,12.5686433137674,14.3564551618549,4.28717797252339,4.69642807989358,3.67687514644008,16.5173821499083,16.7270412891596,18.5863905240055,5.80299666012853,5.58074625974699,3.64639359389732,18.9844439320939,19.1339287410771,18.3357897332172,9.1334861496837,9.11178757114259,5.21918448310842,2.80186915332781,4.00529268565963,1.44932244350839,2.58127163094416,4.75979933595425,9.71465744948071,5.84798775702902,4.92829575807069,5.05599912474307,5.45377032249785,4.1565760736459,5.3000936176551,0.845060518660083,3.84979432242953,15.2883143823987,7.11066703153331,2.81438353314578,1.77351905832569,1.51657333504435,6.50848114398642,5.69663344023778,4.75014845007439,3.64319186208885,3.65358573974569,2.99800146432876,4.22023393547343,3.41007250693544,4.52399728786832,13.5957232253906,2.89198713839823,6.19227386364912,3.558870698843,4.85851340612866,4.84875253135222,5.59175283654366,4.9772735491963,5.65506108396329,4.59822699375465,1.1981512450592,3.59941638596045,1.52484272487678,15.1288545798871,4.57500602818627,2.63874139437015,13.3844726548053,12.2743419518559,11.2205544062162,10.2211995732687,2.85150218780886,4.85187185379363,2.0217820674694,2.10441855886474,1.56144531555244,2.29902104433473,2.70093194708024,3.61691562805716,3.60593445502038,3.33095672740609,3.93547243150861,2.58703370739016,1.29340795759705,0.756424320671277,1.75951124163949,1.97276159184817,3.05851974148158,2.78601733217733,2.88094990971121,1.99034266818493,2.1066395619397,1.54408744268829,1.42081749697796,2.48550927042602,2.34526059981096,3.96136535214233,4.02466050494857,3.34499193970586,4.62801338662135,4.18561100550734,5.633741429392,5.95503246072564,5.75959474697182,6.7308660272429,8.26901857367728,12.1345989563026,7.90380415047782,12.2127841071938,8.20130799400096,5.45394445610208,8.59088835757875,6.08236303326152,2.98603550749328,1.39342003116263,2.96395161040815,2.42020229548011,3.55804870151792,5.1360919050391,9.49058123089023,6.25856027951241,9.55073793441024,7.16243299348143,7.79856348476481,6.29173586057955,9.07779809473716,8.16479220342906,1.70701110857774,1.14248512609729,0,1.62921062276251,1.55161989734101,2.45475369616115,5.6280518040589,5.75679577120448,8.16393384775149,6.91024117962083,9.78293669387591,6.34011401721157,4.91397487783007,6.74586337154561,4.86864291332407,7.71766911207734,6.62027214631691,6.61701116136864,12.9708181420028,7.96228098245436,11.5014565221884,5.20997326735905,4.36852742360385,10.6083128737787,6.45830688678884,7.23665282045051,4.43407656399851,1.89491411770485,1.30371981153621,1.69745085775188,1.64283173801951,3.1826188913945,3.80869825417622,6.43941037930736,2.67979744980525,2.6575762757853,4.62418829106713,5.07976275618788,5.00786447411097,6.50920763616802,7.53956419696361,3.26343410291226,1.96705709207614,0.827810238914197,15.5734072288158,15.4719426301708,0.819674726883377,9.3414243065618,2.2085575359138,1.95219372148319,2.15423397732799,5.25731355495614,6.46116154838943,3.67999490025482,2.83367491172426,4.38383786866968,2.76701444562566,2.57057053137446,2.98074178937364,2.49291845134157,2.76907830901079,3.46437258242324,0,2.18502572539483,3.02323556964751,0.943025398779491,2.36241514304618,0.922305443831782,4.39328098385976,2.54473610634254,4.27796854061666,3.79244109522979,0,3.09406629744561,6.46835250932197,2.16073312837572,2.06973894052407,2.35770738534752,1.95074257006501,2.85390108163313,3.9491764944509,4.26250928760439,3.05073220482823,2.75381692122966,5.51320995137405,2.4732937941222,3.71368181400583,1.74907482291652,2.50681922406587,0.656563598980245,6.99554007911642,12.4234952347041,5.63873906632914,2.06386867963222,6.2966139305702,9.41842285023455,8.06495943554049,9.37990510146743,1.5298058699447,2.6590775941495,1.65839968565309,1.90934123603023,1.58167996790568,2.84647253977588,2.48412283890143,1.67270636811575,3.71216358368502,2.69728692769641,2.89287095038676,2.6175594198403,4.40690909192096,5.59205381778233,2.25477175473676,1.49516546043979,2.31641886639937,2.33341426012857,2.19571699912143,2.87225413334323,2.46450201156083,3.51551839078665,3.77493639932559,1.44950472495604,2.59227005632079,3.47612232690996,1.62180172232131,1.74608627180206,3.24802057444488,3.22248052201467,2.38417625737518,3.846254384639,3.98761723371358,4.4425237977185,4.95344243257499,3.42809029465258,3.80085734885034,5.09922760693746,6.66198342434943,7.9355634265324,1.55390167361845,1.07656627931371,1.00730769818447,4.056981474676,2.064507229963,2.01466786693992,1.07184189539533,2.00628841614145,12.9892923801925,11.0478056761722,11.4579102687879,14.2638141345261,15.7568979547248,11.3309084608455,12.1504050041725,12.158672487054,14.5005570874945,13.4617681055473,1.14166082342594,2.39414924040619,3.24393850932855,4.132814190161,2.51535795153579,1.83843508450014,3.33370091702423,2.47242068686673,2.56735367673452,3.03236654116557,3.29523089857312,2.64076877940507,2.52832070168682,3.13723246783859,4.13535376480416,3.81034953026459,4.63537303779422,3.8581844092741,2.47251540481984,2.94397840268795,3.42869252385415,4.08194354166476,3.09967046931517,3.63366041580821,3.85848459702856,3.9768865709088,2.74391959309159,3.15683653725411,3.53090695999241,1.68342681497322,3.91495559809775,3.34915240076916,3.6830793885272,2.16911577660352,3.85813221962283,4.49659040288303,3.50897412668113,1.93383948643468,4.20834330551455,3.08827986767322,3.94175320554716
|short_description=p1@D16H22S680E
}}

Revision as of 03:05, 6 August 2015

Short description:p1@D16H22S680E
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_D16H22S680E_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000115628, ENSMUST00000130752, NM_138583, uc007ynj.1, uc007ynk.2_5end
EntrezGene:27883
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@D16H22S680E

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I517.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.15
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.37
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I211.85
Ileum epithelium, pool1.CNhs13199.10252-104B97.22
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F94.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A813.60
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D513.38
cortex, neonate N30.CNhs11107.1392-42F212.27
diencephalon, adult.CNhs10482.20-12F211.22
diencephalon, neonate N30.CNhs11201.1388-42B210.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E35.96
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G16.73
heart, neonate N16.CNhs11209.782-15G18.27
heart, neonate N20.CNhs11127.821-26I612.13
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D212.21
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D55.63
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F38.16
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B29.78
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F57.72
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F412.97
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H16.46
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C215.57
medulla oblongata, neonate N30.CNhs11200.1396-42A315.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.34
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C912.42
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D19.42
spleen, neonate N20.CNhs11112.824-19H18.06
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C44.44
thymus, neonate N07.CNhs11211.713-19D34.95
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G75.10
thymus, neonate N30.CNhs11132.1393-42G26.66
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube1.22e-11114
regional part of nervous system2.08e-1054
anatomical conduit2.32e-10122
organ system subdivision1.12e-09194
gray matter2.18e-0934
neural tube2.84e-0952
neural rod2.84e-0952
future spinal cord2.84e-0952
neural keel2.84e-0952
brain grey matter1.70e-0729
regional part of telencephalon1.70e-0729
telencephalon1.70e-0729
central nervous system3.34e-0773
regional part of brain4.34e-0746
nervous system5.98e-0775
occipital lobe8.06e-0710
visual cortex8.06e-0710
neocortex8.06e-0710
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