Personal tools

FFCP PHASE1:Mm9::chr6:72256828..72256859,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=20388|HGNC=|MCL_coexpression_id=32|UniProt=|association_with_transcript=410bp_to_uc009cie.1_5end|description=CAGE_peak_3_at_Sftpb_5end|id=chr6:72256828..72256859,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.20e-21!14;UBERON:0000117!3.20e-21!14;UBERON:0000171!3.20e-21!14;UBERON:0000170!3.20e-21!14;UBERON:0005597!3.20e-21!14;UBERON:0000118!3.20e-21!14;UBERON:0005153!5.13e-17!17;UBERON:0005178!5.13e-17!17;UBERON:0005181!5.13e-17!17;UBERON:0002224!5.13e-17!17;UBERON:0000915!5.13e-17!17;UBERON:0008947!5.13e-17!17;UBERON:0003258!5.13e-17!17;UBERON:0005157!9.06e-10!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.44e-68,14;UBERON:0000117,5.44e-68,14;UBERON:0000171,5.44e-68,14;UBERON:0000170,5.44e-68,14;UBERON:0005597,5.44e-68,14;UBERON:0000118,5.44e-68,14;UBERON:0005153,6.20e-56,17;UBERON:0005178,6.20e-56,17;UBERON:0005181,6.20e-56,17;UBERON:0002224,6.20e-56,17;UBERON:0000915,6.20e-56,17;UBERON:0008947,6.20e-56,17;UBERON:0003258,6.20e-56,17;UBERON:0005157,1.73e-47,20;UBERON:0000065,6.49e-23,41;UBERON:0001004,2.35e-22,42;UBERON:0009569,5.41e-14,66;UBERON:0005911,2.36e-13,69;UBERON:0000310,2.07e-12,6;UBERON:0001443,2.07e-12,6;UBERON:0005177,1.43e-11,79;UBERON:0001041,2.04e-11,80;UBERON:0002100,4.62e-10,90;UBERON:0000025,9.12e-08,114;UBERON:0004921,9.12e-08,114;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.79e-07,118;UBERON:0000925,1.79e-07,118;UBERON:0006595,1.79e-07,118;UBERON:0004111,3.37e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,12.0089573608293,0,0,0,1.17345124144251,2.01007508930179,4.52282917683426,12.4885534628991,8.19702749352193,10.1873757238436,9.08892181347676,9.01248230936559,12.0879487306127,11.7165737451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p3@Sftpb}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20388
|HGNC=
|MCL_coexpression_id=32
|TSSclassifier=NA
|UniProt=
|association_with_transcript=410bp_to_uc009cie.1_5end
|cluster_id=chr6:72256828..72256859,+
|description=CAGE_peak_3_at_Sftpb_5end
|id=chr6:72256828..72256859,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!3.20e-21!14;UBERON:0000117!3.20e-21!14;UBERON:0000171!3.20e-21!14;UBERON:0000170!3.20e-21!14;UBERON:0005597!3.20e-21!14;UBERON:0000118!3.20e-21!14;UBERON:0005153!5.13e-17!17;UBERON:0005178!5.13e-17!17;UBERON:0005181!5.13e-17!17;UBERON:0002224!5.13e-17!17;UBERON:0000915!5.13e-17!17;UBERON:0008947!5.13e-17!17;UBERON:0003258!5.13e-17!17;UBERON:0005157!9.06e-10!27
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.44e-68,14;UBERON:0000117,5.44e-68,14;UBERON:0000171,5.44e-68,14;UBERON:0000170,5.44e-68,14;UBERON:0005597,5.44e-68,14;UBERON:0000118,5.44e-68,14;UBERON:0005153,6.20e-56,17;UBERON:0005178,6.20e-56,17;UBERON:0005181,6.20e-56,17;UBERON:0002224,6.20e-56,17;UBERON:0000915,6.20e-56,17;UBERON:0008947,6.20e-56,17;UBERON:0003258,6.20e-56,17;UBERON:0005157,1.73e-47,20;UBERON:0000065,6.49e-23,41;UBERON:0001004,2.35e-22,42;UBERON:0009569,5.41e-14,66;UBERON:0005911,2.36e-13,69;UBERON:0000310,2.07e-12,6;UBERON:0001443,2.07e-12,6;UBERON:0005177,1.43e-11,79;UBERON:0001041,2.04e-11,80;UBERON:0002100,4.62e-10,90;UBERON:0000025,9.12e-08,114;UBERON:0004921,9.12e-08,114;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.79e-07,118;UBERON:0000925,1.79e-07,118;UBERON:0006595,1.79e-07,118;UBERON:0004111,3.37e-07,122
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,12.0089573608293,0,0,0,1.17345124144251,2.01007508930179,4.52282917683426,12.4885534628991,8.19702749352193,10.1873757238436,9.08892181347676,9.01248230936559,12.0879487306127,11.7165737451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0
|short_description=p3@Sftpb
}}

Revision as of 02:30, 6 August 2015

Short description:p3@Sftpb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sftpb_5end
Coexpression cluster:MCL_coexpression_mm9:32
Association with transcript: 410bp_to_uc009cie.1_5end
EntrezGene:20388
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
2.5
5.0
7.5
10.0
12.5
15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:72256828..72256859,%2B&oldid=3969587"