FFCP PHASE1:Mm9::chrX:143397044..143397063,+: Difference between revisions
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{{FFCP|EntrezGene=15560|HGNC=|MCL_coexpression_id=20|UniProt=P34968,E9PYA4,Q8BZI5,B1ATN4|association_with_transcript=0bp_to_ENSMUST00000036303,ENSMUST00000096299,ENSMUST00000131999,ENSMUST00000149260,ENSMUST00000156697,ENSMUST00000164060,NM_008312,uc009unc.1,uc009und.2,uc009une.2_5end|description=CAGE_peak_1_at_Htr2c_5end|id=chrX:143397044..143397063,+|ontology_enrichment_celltype=CL:0000117!4.93e-14!23;CL:0000337!4.93e-14!23;CL:0000540!1.61e-12!33;CL:0000047!1.61e-12!33;CL:0000031!1.61e-12!33;CL:0000404!1.61e-12!33;CL:0000221!2.71e-10!44;CL:0000133!2.71e-10!44;CL:0002319!3.65e-10!43;CL:0000393!4.61e-09!39;CL:0000211!4.61e-09!39;CL:0000055!2.62e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.25e-15,23;CL:0000337,5.25e-15,23;CL:0000540,1.25e-10,33;CL:0000047,1.25e-10,33;CL:0000031,1.25e-10,33;CL:0000404,1.25e-10,33;CL:0000393,5.16e-08,39;CL:0000211,5.16e-08,39;CL:0002319,2.19e-07,43;CL:0000221,4.45e-07,44;CL:0000133,4.45e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.25e-28!73;UBERON:0005743!1.25e-28!73;UBERON:0000073!3.22e-27!75;UBERON:0001016!3.22e-27!75;UBERON:0001049!9.96e-25!52;UBERON:0005068!9.96e-25!52;UBERON:0006241!9.96e-25!52;UBERON:0007135!9.96e-25!52;UBERON:0000955!2.92e-23!50;UBERON:0006238!2.92e-23!50;UBERON:0002616!1.86e-22!49;UBERON:0000033!1.76e-21!63;UBERON:0002346!3.52e-20!71;UBERON:0003075!3.52e-20!71;UBERON:0007284!3.52e-20!71;UBERON:0004121!6.70e-20!102;UBERON:0000924!6.70e-20!102;UBERON:0006601!6.70e-20!102;UBERON:0002020!1.05e-19!34;UBERON:0003080!5.95e-18!40;UBERON:0003056!3.35e-17!49;UBERON:0002780!4.85e-17!39;UBERON:0001890!4.85e-17!39;UBERON:0006240!4.85e-17!39;UBERON:0002791!9.21e-16!29;UBERON:0003528!9.21e-16!29;UBERON:0001893!9.21e-16!29;UBERON:0007811!8.31e-11!86;UBERON:0000956!6.54e-10!21;UBERON:0001869!6.54e-10!21;UBERON:0000203!6.54e-10!21;UBERON:0002619!7.57e-10!17;UBERON:0000153!5.93e-09!94;UBERON:0002420!2.16e-07!8;UBERON:0007245!2.16e-07!8;UBERON:0010009!2.16e-07!8;UBERON:0010011!2.16e-07!8;UBERON:0000454!2.16e-07!8;UBERON:0003076!2.25e-07!12;UBERON:0003057!2.25e-07!12;UBERON:0002298!6.17e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.84e-23,54;UBERON:0001017,3.43e-22,73;UBERON:0001049,2.54e-21,52;UBERON:0005068,2.54e-21,52;UBERON:0006241,2.54e-21,52;UBERON:0007135,2.54e-21,52;UBERON:0001016,3.37e-21,75;UBERON:0002020,6.03e-20,34;UBERON:0002346,7.72e-17,64;UBERON:0003075,7.72e-17,64;UBERON:0007284,7.72e-17,64;UBERON:0000955,1.41e-16,47;UBERON:0006238,1.41e-16,47;UBERON:0002616,1.06e-15,46;UBERON:0004121,3.93e-15,95;UBERON:0000924,3.93e-15,95;UBERON:0006601,3.93e-15,95;UBERON:0003528,4.50e-15,29;UBERON:0002791,4.50e-15,29;UBERON:0001893,4.50e-15,29;UBERON:0010371,2.93e-13,73;UBERON:0003080,4.79e-13,40;UBERON:0002780,4.47e-12,39;UBERON:0001890,4.47e-12,39;UBERON:0006240,4.47e-12,39;UBERON:0003056,1.05e-10,49;UBERON:0003076,1.13e-09,12;UBERON:0003057,1.13e-09,12;UBERON:0002420,2.86e-09,8;UBERON:0007245,2.86e-09,8;UBERON:0010009,2.86e-09,8;UBERON:0010011,2.86e-09,8;UBERON:0000454,2.86e-09,8;UBERON:0002619,3.71e-09,17;UBERON:0010314,3.50e-08,92;UBERON:0000956,4.36e-08,21;UBERON:0001869,4.36e-08,21;UBERON:0000203,4.36e-08,21;UBERON:0002240,1.06e-07,6;UBERON:0005174,1.06e-07,6;UBERON:0001137,1.06e-07,6;UBERON:0002021,6.19e-07,10;UBERON:0000411,6.19e-07,10;UBERON:0001950,6.19e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75945888556019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31811709640683,0.58328969722285,0,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,4.43681982454325,0,0,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.270011876663381,0,19.9955689082663,18.5529574399355,2.20483438586917,0.191690942036473,3.67687514644008,77.0811166995721,58.9915501953567,66.0508093001847,2.63772575460388,2.74462930807229,4.16730696445408,48.8570248252417,68.0942758138333,66.772834278466,19.4454866412621,15.3761415263031,4.65998614563251,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,2.05530983494308,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,22.5441213698891,21.7824575085993,0,0,0,0,109.94632932314,56.7300747495097,11.3088916901578,35.807809959609,30.6858548796397,82.6996417347049,75.2799460634396,0,0,0,1.26265113531884,0.130120442962704,0,0,0,0.0680364991513279,0.384341160854549,0.843315521037559,1.29351685369508,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.3911920488804,35.1933774337153,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40179147216586,0,0,0,0.234690248288502,0,0,0,0.472905432318573,0.44292937929755,0.797273843287435,2.13022309130459,1.55416483679306,4.91806799177139,0,0,0,0,85.7340150534809,75.4843261653788,0,0,0.315508219416257,0.780877488593277,0,0,0.222798674082394,0,0.809621403349789,1.46127928955656,2.76701444562566,14.7807805554031,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.643011105094777,0,0.178368817602071,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0,74.3555461062144,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,2.29158205375759,2.749650917499,2.74033007908257,0.755393897389701,4.72515750162264,3.15224842256954,3.17199686288943,2.07104124700728,0,1.19707462020309,1.70733605754134,1.70174701947806,0.209613162627982,0.919217542250071,3.11145418922261,2.67845574410562,3.53011130550997,1.51618327058278,2.5347929989024,3.39527414494937,2.80924522409647,2.43295579138503,3.10151532360312,2.85776214769844,3.24476112645595,1.92909220463705,3.29668720642645,2.35518272215036,2.05721551431249,2.12970967391205,0.476872379894642,2.61623549938191,2.35273451038327,2.5384382367503,2.0122077016005,1.31534855718921,1.62964936615034,1.68342681497322,2.37270036248348,1.28055827088233,2.04615521584845,3.71848418846318,1.73615949883027,3.2475375131933,1.16965804222704,2.57845264857958,0.956441660344217,1.10295709559758,2.78241402744506|short_description=p1@Htr2c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15560 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P34968,uniprot:E9PYA4,uniprot:Q8BZI5,uniprot:B1ATN4 | |||
|association_with_transcript=0bp_to_ENSMUST00000036303,ENSMUST00000096299,ENSMUST00000131999,ENSMUST00000149260,ENSMUST00000156697,ENSMUST00000164060,NM_008312,uc009unc.1,uc009und.2,uc009une.2_5end | |||
|cluster_id=chrX:143397044..143397063,+ | |||
|description=CAGE_peak_1_at_Htr2c_5end | |||
|id=chrX:143397044..143397063,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.93e-14!23;CL:0000337!4.93e-14!23;CL:0000540!1.61e-12!33;CL:0000047!1.61e-12!33;CL:0000031!1.61e-12!33;CL:0000404!1.61e-12!33;CL:0000221!2.71e-10!44;CL:0000133!2.71e-10!44;CL:0002319!3.65e-10!43;CL:0000393!4.61e-09!39;CL:0000211!4.61e-09!39;CL:0000055!2.62e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.25e-15,23;CL:0000337,5.25e-15,23;CL:0000540,1.25e-10,33;CL:0000047,1.25e-10,33;CL:0000031,1.25e-10,33;CL:0000404,1.25e-10,33;CL:0000393,5.16e-08,39;CL:0000211,5.16e-08,39;CL:0002319,2.19e-07,43;CL:0000221,4.45e-07,44;CL:0000133,4.45e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-28!73;UBERON:0005743!1.25e-28!73;UBERON:0000073!3.22e-27!75;UBERON:0001016!3.22e-27!75;UBERON:0001049!9.96e-25!52;UBERON:0005068!9.96e-25!52;UBERON:0006241!9.96e-25!52;UBERON:0007135!9.96e-25!52;UBERON:0000955!2.92e-23!50;UBERON:0006238!2.92e-23!50;UBERON:0002616!1.86e-22!49;UBERON:0000033!1.76e-21!63;UBERON:0002346!3.52e-20!71;UBERON:0003075!3.52e-20!71;UBERON:0007284!3.52e-20!71;UBERON:0004121!6.70e-20!102;UBERON:0000924!6.70e-20!102;UBERON:0006601!6.70e-20!102;UBERON:0002020!1.05e-19!34;UBERON:0003080!5.95e-18!40;UBERON:0003056!3.35e-17!49;UBERON:0002780!4.85e-17!39;UBERON:0001890!4.85e-17!39;UBERON:0006240!4.85e-17!39;UBERON:0002791!9.21e-16!29;UBERON:0003528!9.21e-16!29;UBERON:0001893!9.21e-16!29;UBERON:0007811!8.31e-11!86;UBERON:0000956!6.54e-10!21;UBERON:0001869!6.54e-10!21;UBERON:0000203!6.54e-10!21;UBERON:0002619!7.57e-10!17;UBERON:0000153!5.93e-09!94;UBERON:0002420!2.16e-07!8;UBERON:0007245!2.16e-07!8;UBERON:0010009!2.16e-07!8;UBERON:0010011!2.16e-07!8;UBERON:0000454!2.16e-07!8;UBERON:0003076!2.25e-07!12;UBERON:0003057!2.25e-07!12;UBERON:0002298!6.17e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.84e-23,54;UBERON:0001017,3.43e-22,73;UBERON:0001049,2.54e-21,52;UBERON:0005068,2.54e-21,52;UBERON:0006241,2.54e-21,52;UBERON:0007135,2.54e-21,52;UBERON:0001016,3.37e-21,75;UBERON:0002020,6.03e-20,34;UBERON:0002346,7.72e-17,64;UBERON:0003075,7.72e-17,64;UBERON:0007284,7.72e-17,64;UBERON:0000955,1.41e-16,47;UBERON:0006238,1.41e-16,47;UBERON:0002616,1.06e-15,46;UBERON:0004121,3.93e-15,95;UBERON:0000924,3.93e-15,95;UBERON:0006601,3.93e-15,95;UBERON:0003528,4.50e-15,29;UBERON:0002791,4.50e-15,29;UBERON:0001893,4.50e-15,29;UBERON:0010371,2.93e-13,73;UBERON:0003080,4.79e-13,40;UBERON:0002780,4.47e-12,39;UBERON:0001890,4.47e-12,39;UBERON:0006240,4.47e-12,39;UBERON:0003056,1.05e-10,49;UBERON:0003076,1.13e-09,12;UBERON:0003057,1.13e-09,12;UBERON:0002420,2.86e-09,8;UBERON:0007245,2.86e-09,8;UBERON:0010009,2.86e-09,8;UBERON:0010011,2.86e-09,8;UBERON:0000454,2.86e-09,8;UBERON:0002619,3.71e-09,17;UBERON:0010314,3.50e-08,92;UBERON:0000956,4.36e-08,21;UBERON:0001869,4.36e-08,21;UBERON:0000203,4.36e-08,21;UBERON:0002240,1.06e-07,6;UBERON:0005174,1.06e-07,6;UBERON:0001137,1.06e-07,6;UBERON:0002021,6.19e-07,10;UBERON:0000411,6.19e-07,10;UBERON:0001950,6.19e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75945888556019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31811709640683,0.58328969722285,0,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,4.43681982454325,0,0,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.270011876663381,0,19.9955689082663,18.5529574399355,2.20483438586917,0.191690942036473,3.67687514644008,77.0811166995721,58.9915501953567,66.0508093001847,2.63772575460388,2.74462930807229,4.16730696445408,48.8570248252417,68.0942758138333,66.772834278466,19.4454866412621,15.3761415263031,4.65998614563251,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,2.05530983494308,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,22.5441213698891,21.7824575085993,0,0,0,0,109.94632932314,56.7300747495097,11.3088916901578,35.807809959609,30.6858548796397,82.6996417347049,75.2799460634396,0,0,0,1.26265113531884,0.130120442962704,0,0,0,0.0680364991513279,0.384341160854549,0.843315521037559,1.29351685369508,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.3911920488804,35.1933774337153,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40179147216586,0,0,0,0.234690248288502,0,0,0,0.472905432318573,0.44292937929755,0.797273843287435,2.13022309130459,1.55416483679306,4.91806799177139,0,0,0,0,85.7340150534809,75.4843261653788,0,0,0.315508219416257,0.780877488593277,0,0,0.222798674082394,0,0.809621403349789,1.46127928955656,2.76701444562566,14.7807805554031,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.643011105094777,0,0.178368817602071,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0,74.3555461062144,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,2.29158205375759,2.749650917499,2.74033007908257,0.755393897389701,4.72515750162264,3.15224842256954,3.17199686288943,2.07104124700728,0,1.19707462020309,1.70733605754134,1.70174701947806,0.209613162627982,0.919217542250071,3.11145418922261,2.67845574410562,3.53011130550997,1.51618327058278,2.5347929989024,3.39527414494937,2.80924522409647,2.43295579138503,3.10151532360312,2.85776214769844,3.24476112645595,1.92909220463705,3.29668720642645,2.35518272215036,2.05721551431249,2.12970967391205,0.476872379894642,2.61623549938191,2.35273451038327,2.5384382367503,2.0122077016005,1.31534855718921,1.62964936615034,1.68342681497322,2.37270036248348,1.28055827088233,2.04615521584845,3.71848418846318,1.73615949883027,3.2475375131933,1.16965804222704,2.57845264857958,0.956441660344217,1.10295709559758,2.78241402744506 | |||
|short_description=p1@Htr2c | |||
}} |
Revision as of 01:56, 6 August 2015
Short description: | p1@Htr2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Htr2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000036303, ENSMUST00000096299, ENSMUST00000131999, ENSMUST00000149260, ENSMUST00000156697, ENSMUST00000164060, NM_008312, uc009unc.1, uc009und.2, uc009une.2_5end |
EntrezGene: | 15560 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.25e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.25e-15 | 23 |
neuron | 1.25e-10 | 33 |
neuronal stem cell | 1.25e-10 | 33 |
neuroblast | 1.25e-10 | 33 |
electrically signaling cell | 1.25e-10 | 33 |
electrically responsive cell | 5.16e-08 | 39 |
electrically active cell | 5.16e-08 | 39 |
neural cell | 2.19e-07 | 43 |
ectodermal cell | 4.45e-07 | 44 |
neurectodermal cell | 4.45e-07 | 44 |