FFCP PHASE1:Mm9::chr8:124254291..124254304,+: Difference between revisions
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{{FFCP|EntrezGene=57340|HGNC=|MCL_coexpression_id=1|UniProt=Q9ET77|association_with_transcript=-154bp_to_NM_020605_5end|description=CAGE_peak_5_at_Jph3_5end|id=chr8:124254291..124254304,+|ontology_enrichment_celltype=CL:0000117!6.69e-17!23;CL:0000337!6.69e-17!23;CL:0000540!2.60e-15!33;CL:0000047!2.60e-15!33;CL:0000031!2.60e-15!33;CL:0000404!2.60e-15!33;CL:0002319!2.39e-13!43;CL:0000221!7.36e-13!44;CL:0000133!7.36e-13!44;CL:0000393!7.98e-12!39;CL:0000211!7.98e-12!39;CL:0000055!2.29e-10!50|ontology_enrichment_celltype_v019_2=CL:0002610,6.22e-10,3;CL:0002614,1.30e-09,3;CL:0000117,1.29e-08,23;CL:0000337,1.29e-08,23;CL:0000540,8.89e-07,33;CL:0000047,8.89e-07,33;CL:0000031,8.89e-07,33;CL:0000404,8.89e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.81e-35!75;UBERON:0001016!6.81e-35!75;UBERON:0001017!8.03e-35!73;UBERON:0005743!8.03e-35!73;UBERON:0001049!3.44e-27!52;UBERON:0005068!3.44e-27!52;UBERON:0006241!3.44e-27!52;UBERON:0007135!3.44e-27!52;UBERON:0000955!8.77e-26!50;UBERON:0006238!8.77e-26!50;UBERON:0004121!1.29e-25!102;UBERON:0000924!1.29e-25!102;UBERON:0006601!1.29e-25!102;UBERON:0002020!3.73e-25!34;UBERON:0002616!9.98e-25!49;UBERON:0002346!1.94e-23!71;UBERON:0003075!1.94e-23!71;UBERON:0007284!1.94e-23!71;UBERON:0000033!1.66e-21!63;UBERON:0002791!3.80e-20!29;UBERON:0003528!3.80e-20!29;UBERON:0001893!3.80e-20!29;UBERON:0003080!2.93e-18!40;UBERON:0002780!2.97e-17!39;UBERON:0001890!2.97e-17!39;UBERON:0006240!2.97e-17!39;UBERON:0003056!1.32e-16!49;UBERON:0002021!1.96e-13!10;UBERON:0000411!1.96e-13!10;UBERON:0001950!1.96e-13!10;UBERON:0007811!2.70e-13!86;UBERON:0002619!1.44e-12!17;UBERON:0000956!1.90e-12!21;UBERON:0001869!1.90e-12!21;UBERON:0000203!1.90e-12!21;UBERON:0000153!3.77e-11!94;UBERON:0003076!1.26e-09!12;UBERON:0003057!1.26e-09!12;UBERON:0002420!2.99e-09!8;UBERON:0007245!2.99e-09!8;UBERON:0010009!2.99e-09!8;UBERON:0010011!2.99e-09!8;UBERON:0000454!2.99e-09!8;UBERON:0002298!1.91e-08!6;UBERON:0002240!2.02e-07!6;UBERON:0005174!2.02e-07!6;UBERON:0001137!2.02e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.69e-34,54;UBERON:0001017,1.78e-32,73;UBERON:0001016,1.85e-31,75;UBERON:0001049,1.08e-29,52;UBERON:0005068,1.08e-29,52;UBERON:0006241,1.08e-29,52;UBERON:0007135,1.08e-29,52;UBERON:0000955,5.14e-28,47;UBERON:0006238,5.14e-28,47;UBERON:0002021,8.72e-28,10;UBERON:0000411,8.72e-28,10;UBERON:0001950,8.72e-28,10;UBERON:0002616,3.72e-26,46;UBERON:0004121,1.19e-23,95;UBERON:0000924,1.19e-23,95;UBERON:0006601,1.19e-23,95;UBERON:0002346,3.74e-23,64;UBERON:0003075,3.74e-23,64;UBERON:0007284,3.74e-23,64;UBERON:0002020,4.36e-21,34;UBERON:0003528,7.98e-20,29;UBERON:0002791,7.98e-20,29;UBERON:0001893,7.98e-20,29;UBERON:0003080,9.27e-20,40;UBERON:0010371,1.17e-19,73;UBERON:0002619,7.89e-19,17;UBERON:0002780,4.94e-18,39;UBERON:0001890,4.94e-18,39;UBERON:0006240,4.94e-18,39;UBERON:0000956,7.17e-18,21;UBERON:0001869,7.17e-18,21;UBERON:0000203,7.17e-18,21;UBERON:0003056,2.12e-15,49;UBERON:0010314,1.62e-14,92;UBERON:0002950,5.36e-12,4;UBERON:0001891,5.36e-12,4;UBERON:0009616,5.36e-12,4;UBERON:0010286,5.36e-12,4;UBERON:0000025,1.06e-10,114;UBERON:0003076,1.47e-10,12;UBERON:0003057,1.47e-10,12;UBERON:0004684,6.22e-10,3;UBERON:0002275,6.22e-10,3;UBERON:0004111,1.18e-09,122;UBERON:0002038,1.30e-09,3;UBERON:0009663,1.30e-09,3;UBERON:0009661,1.30e-09,3;UBERON:0000125,1.30e-09,3;UBERON:0002308,1.30e-09,3;UBERON:0011216,1.38e-08,194;UBERON:0004733,5.47e-08,6;UBERON:0004732,5.47e-08,6;UBERON:0002028,5.47e-08,6;UBERON:0007277,5.47e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0.856952953211411,1.32521124570968,0.122490799214954,0.0958454710182364,0,3.30347642998166,3.44755812830007,4.91540906419979,0.263772575460388,0.365950574409639,0.52091337055676,4.74611098302348,2.25105044012672,3.36156145108982,1.17851434189467,0.711858403995515,0.931997229126503,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22058876712702,5.44561437714983,0,0,0,0,2.24685959107234,0.915001205637253,0.251308704225729,3.82413504423008,1.53429274398198,1.24672826735736,2.43361894601636,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.81308047821288,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,1.16902343164525,0.790575555893047,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,1.71868654031819,3.95262319390481,2.74033007908257,5.2877572817279,2.02506750069542,3.60256962579376,3.17199686288943,4.14208249401456,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.505394423527595,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421|short_description=p5@Jph3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:57340 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ET77 | |||
|association_with_transcript=-154bp_to_NM_020605_5end | |||
|cluster_id=chr8:124254291..124254304,+ | |||
|description=CAGE_peak_5_at_Jph3_5end | |||
|id=chr8:124254291..124254304,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.69e-17!23;CL:0000337!6.69e-17!23;CL:0000540!2.60e-15!33;CL:0000047!2.60e-15!33;CL:0000031!2.60e-15!33;CL:0000404!2.60e-15!33;CL:0002319!2.39e-13!43;CL:0000221!7.36e-13!44;CL:0000133!7.36e-13!44;CL:0000393!7.98e-12!39;CL:0000211!7.98e-12!39;CL:0000055!2.29e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.22e-10,3;CL:0002614,1.30e-09,3;CL:0000117,1.29e-08,23;CL:0000337,1.29e-08,23;CL:0000540,8.89e-07,33;CL:0000047,8.89e-07,33;CL:0000031,8.89e-07,33;CL:0000404,8.89e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.81e-35!75;UBERON:0001016!6.81e-35!75;UBERON:0001017!8.03e-35!73;UBERON:0005743!8.03e-35!73;UBERON:0001049!3.44e-27!52;UBERON:0005068!3.44e-27!52;UBERON:0006241!3.44e-27!52;UBERON:0007135!3.44e-27!52;UBERON:0000955!8.77e-26!50;UBERON:0006238!8.77e-26!50;UBERON:0004121!1.29e-25!102;UBERON:0000924!1.29e-25!102;UBERON:0006601!1.29e-25!102;UBERON:0002020!3.73e-25!34;UBERON:0002616!9.98e-25!49;UBERON:0002346!1.94e-23!71;UBERON:0003075!1.94e-23!71;UBERON:0007284!1.94e-23!71;UBERON:0000033!1.66e-21!63;UBERON:0002791!3.80e-20!29;UBERON:0003528!3.80e-20!29;UBERON:0001893!3.80e-20!29;UBERON:0003080!2.93e-18!40;UBERON:0002780!2.97e-17!39;UBERON:0001890!2.97e-17!39;UBERON:0006240!2.97e-17!39;UBERON:0003056!1.32e-16!49;UBERON:0002021!1.96e-13!10;UBERON:0000411!1.96e-13!10;UBERON:0001950!1.96e-13!10;UBERON:0007811!2.70e-13!86;UBERON:0002619!1.44e-12!17;UBERON:0000956!1.90e-12!21;UBERON:0001869!1.90e-12!21;UBERON:0000203!1.90e-12!21;UBERON:0000153!3.77e-11!94;UBERON:0003076!1.26e-09!12;UBERON:0003057!1.26e-09!12;UBERON:0002420!2.99e-09!8;UBERON:0007245!2.99e-09!8;UBERON:0010009!2.99e-09!8;UBERON:0010011!2.99e-09!8;UBERON:0000454!2.99e-09!8;UBERON:0002298!1.91e-08!6;UBERON:0002240!2.02e-07!6;UBERON:0005174!2.02e-07!6;UBERON:0001137!2.02e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.69e-34,54;UBERON:0001017,1.78e-32,73;UBERON:0001016,1.85e-31,75;UBERON:0001049,1.08e-29,52;UBERON:0005068,1.08e-29,52;UBERON:0006241,1.08e-29,52;UBERON:0007135,1.08e-29,52;UBERON:0000955,5.14e-28,47;UBERON:0006238,5.14e-28,47;UBERON:0002021,8.72e-28,10;UBERON:0000411,8.72e-28,10;UBERON:0001950,8.72e-28,10;UBERON:0002616,3.72e-26,46;UBERON:0004121,1.19e-23,95;UBERON:0000924,1.19e-23,95;UBERON:0006601,1.19e-23,95;UBERON:0002346,3.74e-23,64;UBERON:0003075,3.74e-23,64;UBERON:0007284,3.74e-23,64;UBERON:0002020,4.36e-21,34;UBERON:0003528,7.98e-20,29;UBERON:0002791,7.98e-20,29;UBERON:0001893,7.98e-20,29;UBERON:0003080,9.27e-20,40;UBERON:0010371,1.17e-19,73;UBERON:0002619,7.89e-19,17;UBERON:0002780,4.94e-18,39;UBERON:0001890,4.94e-18,39;UBERON:0006240,4.94e-18,39;UBERON:0000956,7.17e-18,21;UBERON:0001869,7.17e-18,21;UBERON:0000203,7.17e-18,21;UBERON:0003056,2.12e-15,49;UBERON:0010314,1.62e-14,92;UBERON:0002950,5.36e-12,4;UBERON:0001891,5.36e-12,4;UBERON:0009616,5.36e-12,4;UBERON:0010286,5.36e-12,4;UBERON:0000025,1.06e-10,114;UBERON:0003076,1.47e-10,12;UBERON:0003057,1.47e-10,12;UBERON:0004684,6.22e-10,3;UBERON:0002275,6.22e-10,3;UBERON:0004111,1.18e-09,122;UBERON:0002038,1.30e-09,3;UBERON:0009663,1.30e-09,3;UBERON:0009661,1.30e-09,3;UBERON:0000125,1.30e-09,3;UBERON:0002308,1.30e-09,3;UBERON:0011216,1.38e-08,194;UBERON:0004733,5.47e-08,6;UBERON:0004732,5.47e-08,6;UBERON:0002028,5.47e-08,6;UBERON:0007277,5.47e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0.856952953211411,1.32521124570968,0.122490799214954,0.0958454710182364,0,3.30347642998166,3.44755812830007,4.91540906419979,0.263772575460388,0.365950574409639,0.52091337055676,4.74611098302348,2.25105044012672,3.36156145108982,1.17851434189467,0.711858403995515,0.931997229126503,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22058876712702,5.44561437714983,0,0,0,0,2.24685959107234,0.915001205637253,0.251308704225729,3.82413504423008,1.53429274398198,1.24672826735736,2.43361894601636,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.81308047821288,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,1.16902343164525,0.790575555893047,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,1.71868654031819,3.95262319390481,2.74033007908257,5.2877572817279,2.02506750069542,3.60256962579376,3.17199686288943,4.14208249401456,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.505394423527595,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Jph3 | |||
}} |
Revision as of 01:40, 6 August 2015
Short description: | p5@Jph3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Jph3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -154bp_to_NM_020605_5end |
EntrezGene: | 57340 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.22e-10 | 3 |
neuron of the substantia nigra | 1.30e-09 | 3 |
CNS neuron (sensu Vertebrata) | 1.29e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-08 | 23 |
neuron | 8.89e-07 | 33 |
neuronal stem cell | 8.89e-07 | 33 |
neuroblast | 8.89e-07 | 33 |
electrically signaling cell | 8.89e-07 | 33 |