FFCP PHASE1:Mm9::chr11:52174551..52174566,+: Difference between revisions
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{{FFCP|EntrezGene=22333|HGNC=|UniProt=Q60932|association_with_transcript=-50bp_to_NM_011694,uc007ivm.1_5end|description=CAGE_peak_2_at_Vdac1_5end|id=chr11:52174551..52174566,+|ontology_enrichment_celltype=CL:0000117!3.60e-11!23;CL:0000337!3.60e-11!23;CL:0002319!1.36e-09!43;CL:0000221!1.80e-09!44;CL:0000133!1.80e-09!44;CL:0000055!1.64e-08!50;CL:0000540!4.00e-07!33;CL:0000047!4.00e-07!33;CL:0000031!4.00e-07!33;CL:0000404!4.00e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-11,23;CL:0000337,3.60e-11,23;CL:0002319,1.36e-09,43;CL:0000221,1.80e-09,44;CL:0000133,1.80e-09,44;CL:0000540,4.00e-07,33;CL:0000047,4.00e-07,33;CL:0000031,4.00e-07,33;CL:0000404,4.00e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.10e-13!102;UBERON:0000924!1.10e-13!102;UBERON:0006601!1.10e-13!102;UBERON:0002346!1.54e-13!71;UBERON:0003075!1.54e-13!71;UBERON:0007284!1.54e-13!71;UBERON:0001017!4.66e-13!73;UBERON:0005743!4.66e-13!73;UBERON:0000073!7.30e-13!75;UBERON:0001016!7.30e-13!75;UBERON:0001049!1.20e-11!52;UBERON:0005068!1.20e-11!52;UBERON:0006241!1.20e-11!52;UBERON:0007135!1.20e-11!52;UBERON:0000033!6.17e-11!63;UBERON:0003103!2.98e-10!43;UBERON:0002616!4.79e-10!49;UBERON:0002020!5.05e-10!34;UBERON:0000955!5.67e-10!50;UBERON:0006238!5.67e-10!50;UBERON:0003056!1.16e-08!49;UBERON:0007100!2.19e-08!18;UBERON:0000948!2.19e-08!18;UBERON:0005498!2.19e-08!18;UBERON:0004140!2.19e-08!18;UBERON:0009881!2.19e-08!18;UBERON:0004141!2.19e-08!18;UBERON:0003084!2.19e-08!18;UBERON:0007005!2.19e-08!18;UBERON:0004139!2.19e-08!18;UBERON:0004291!2.19e-08!18;UBERON:0002791!1.48e-07!29;UBERON:0003528!1.48e-07!29;UBERON:0001893!1.48e-07!29;UBERON:0003080!2.24e-07!40;UBERON:0000025!3.20e-07!114;UBERON:0002780!5.02e-07!39;UBERON:0001890!5.02e-07!39;UBERON:0006240!5.02e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.63e-22,92;UBERON:0001017,4.66e-13,73;UBERON:0001016,7.30e-13,75;UBERON:0000073,1.64e-12,54;UBERON:0004121,2.40e-12,95;UBERON:0000924,2.40e-12,95;UBERON:0006601,2.40e-12,95;UBERON:0002346,2.57e-12,64;UBERON:0003075,2.57e-12,64;UBERON:0007284,2.57e-12,64;UBERON:0001049,1.20e-11,52;UBERON:0005068,1.20e-11,52;UBERON:0006241,1.20e-11,52;UBERON:0007135,1.20e-11,52;UBERON:0010371,2.45e-10,73;UBERON:0003103,2.98e-10,43;UBERON:0002020,5.05e-10,34;UBERON:0002616,8.38e-09,46;UBERON:0000955,9.74e-09,47;UBERON:0006238,9.74e-09,47;UBERON:0003056,1.16e-08,49;UBERON:0007100,2.19e-08,18;UBERON:0000948,2.19e-08,18;UBERON:0005498,2.19e-08,18;UBERON:0004140,2.19e-08,18;UBERON:0009881,2.19e-08,18;UBERON:0004141,2.19e-08,18;UBERON:0003084,2.19e-08,18;UBERON:0007005,2.19e-08,18;UBERON:0004139,2.19e-08,18;UBERON:0004291,2.19e-08,18;UBERON:0003528,1.48e-07,29;UBERON:0002791,1.48e-07,29;UBERON:0001893,1.48e-07,29;UBERON:0003080,2.24e-07,40;UBERON:0000025,3.20e-07,114;UBERON:0002780,5.02e-07,39;UBERON:0001890,5.02e-07,39;UBERON:0006240,5.02e-07,39|phase1_expression=11.5307169915452,8.02643437570531,8.18998630901165,5.74682001482977,7.01254021924886,10.0727563147134,7.94282978024787,4.00282302668886,1.40788722151667,1.87251621057595,4.45166717386313,3.82906363177615,2.73921167889929,2.44777126773193,8.32774404539157,6.07425802169478,4.19737126876888,3.15462165358238,2.74228867211478,4.66828616977833,8.67441559540912,9.63122226648587,7.83599367416806,11.0394771727451,8.71755268055246,9.18771142584032,11.1998119001359,11.8509177977239,14.4417798786844,13.6096270070363,11.5299865540758,5.71527606113668,4.92051830067656,0,10.9763615505484,11.802659820453,8.77928231928187,6.27797446105362,13.2827008569046,6.28228492768558,3.52938892818609,6.14740936462601,7.2826552954673,10.9530231638752,11.0500855029271,11.5634453861859,14.0830441982647,27.0351193911754,31.195437948295,19.8318497055769,25.6175151574413,15.8127820801469,2.85230430298152,1.45072428402269,4.36921938885203,15.9500850342287,8.02293631828519,11.3447860301037,24.2779753031517,25.9205579843296,29.7900759647904,26.4298735013923,22.2323699027785,7.64914759689189,9.88866362566974,7.8152812644071,13.7816050838466,21.9004434033286,18.0419925416751,21.3309382564071,15.7743721013537,35.1350710816678,22.7494597180162,16.9037302916637,18.8815577905926,15.6267193723704,19.82085857989,22.9837208553338,19.9688493233117,25.9815986828482,25.7995154958795,15.106487746146,33.7811428791671,13.5063026407603,17.8773949898868,23.5702868378934,21.3557521198654,23.2999307281626,12.8734528666413,11.3357340160178,5.2175607966302,12.9063581547208,16.9992833426938,7.01614149129162,9.74664626171504,12.9927797258227,18.5386634573912,8.52151612890289,9.35229616570328,13.0735642568826,12.1125341007945,3.84979432242953,2.54805239706646,0,11.0410430915719,11.9079136773296,10.6160133453104,10.3907330544345,3.36619248741323,9.50029690014878,16.654591369549,17.6589977421042,22.3697032338377,16.4287678202359,13.8754674420132,13.3206586809456,9.39340877390621,8.53136205827479,15.0383793831479,22.0002915928476,15.2380647737672,16.0008833534623,7.45567044872489,11.711231880461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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22333 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q60932 | |||
|association_with_transcript=-50bp_to_NM_011694,uc007ivm.1_5end | |||
|cluster_id=chr11:52174551..52174566,+ | |||
|description=CAGE_peak_2_at_Vdac1_5end | |||
|id=chr11:52174551..52174566,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.60e-11!23;CL:0000337!3.60e-11!23;CL:0002319!1.36e-09!43;CL:0000221!1.80e-09!44;CL:0000133!1.80e-09!44;CL:0000055!1.64e-08!50;CL:0000540!4.00e-07!33;CL:0000047!4.00e-07!33;CL:0000031!4.00e-07!33;CL:0000404!4.00e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-11,23;CL:0000337,3.60e-11,23;CL:0002319,1.36e-09,43;CL:0000221,1.80e-09,44;CL:0000133,1.80e-09,44;CL:0000540,4.00e-07,33;CL:0000047,4.00e-07,33;CL:0000031,4.00e-07,33;CL:0000404,4.00e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.10e-13!102;UBERON:0000924!1.10e-13!102;UBERON:0006601!1.10e-13!102;UBERON:0002346!1.54e-13!71;UBERON:0003075!1.54e-13!71;UBERON:0007284!1.54e-13!71;UBERON:0001017!4.66e-13!73;UBERON:0005743!4.66e-13!73;UBERON:0000073!7.30e-13!75;UBERON:0001016!7.30e-13!75;UBERON:0001049!1.20e-11!52;UBERON:0005068!1.20e-11!52;UBERON:0006241!1.20e-11!52;UBERON:0007135!1.20e-11!52;UBERON:0000033!6.17e-11!63;UBERON:0003103!2.98e-10!43;UBERON:0002616!4.79e-10!49;UBERON:0002020!5.05e-10!34;UBERON:0000955!5.67e-10!50;UBERON:0006238!5.67e-10!50;UBERON:0003056!1.16e-08!49;UBERON:0007100!2.19e-08!18;UBERON:0000948!2.19e-08!18;UBERON:0005498!2.19e-08!18;UBERON:0004140!2.19e-08!18;UBERON:0009881!2.19e-08!18;UBERON:0004141!2.19e-08!18;UBERON:0003084!2.19e-08!18;UBERON:0007005!2.19e-08!18;UBERON:0004139!2.19e-08!18;UBERON:0004291!2.19e-08!18;UBERON:0002791!1.48e-07!29;UBERON:0003528!1.48e-07!29;UBERON:0001893!1.48e-07!29;UBERON:0003080!2.24e-07!40;UBERON:0000025!3.20e-07!114;UBERON:0002780!5.02e-07!39;UBERON:0001890!5.02e-07!39;UBERON:0006240!5.02e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.63e-22,92;UBERON:0001017,4.66e-13,73;UBERON:0001016,7.30e-13,75;UBERON:0000073,1.64e-12,54;UBERON:0004121,2.40e-12,95;UBERON:0000924,2.40e-12,95;UBERON:0006601,2.40e-12,95;UBERON:0002346,2.57e-12,64;UBERON:0003075,2.57e-12,64;UBERON:0007284,2.57e-12,64;UBERON:0001049,1.20e-11,52;UBERON:0005068,1.20e-11,52;UBERON:0006241,1.20e-11,52;UBERON:0007135,1.20e-11,52;UBERON:0010371,2.45e-10,73;UBERON:0003103,2.98e-10,43;UBERON:0002020,5.05e-10,34;UBERON:0002616,8.38e-09,46;UBERON:0000955,9.74e-09,47;UBERON:0006238,9.74e-09,47;UBERON:0003056,1.16e-08,49;UBERON:0007100,2.19e-08,18;UBERON:0000948,2.19e-08,18;UBERON:0005498,2.19e-08,18;UBERON:0004140,2.19e-08,18;UBERON:0009881,2.19e-08,18;UBERON:0004141,2.19e-08,18;UBERON:0003084,2.19e-08,18;UBERON:0007005,2.19e-08,18;UBERON:0004139,2.19e-08,18;UBERON:0004291,2.19e-08,18;UBERON:0003528,1.48e-07,29;UBERON:0002791,1.48e-07,29;UBERON:0001893,1.48e-07,29;UBERON:0003080,2.24e-07,40;UBERON:0000025,3.20e-07,114;UBERON:0002780,5.02e-07,39;UBERON:0001890,5.02e-07,39;UBERON:0006240,5.02e-07,39 | |||
|phase1_expression=11.5307169915452,8.02643437570531,8.18998630901165,5.74682001482977,7.01254021924886,10.0727563147134,7.94282978024787,4.00282302668886,1.40788722151667,1.87251621057595,4.45166717386313,3.82906363177615,2.73921167889929,2.44777126773193,8.32774404539157,6.07425802169478,4.19737126876888,3.15462165358238,2.74228867211478,4.66828616977833,8.67441559540912,9.63122226648587,7.83599367416806,11.0394771727451,8.71755268055246,9.18771142584032,11.1998119001359,11.8509177977239,14.4417798786844,13.6096270070363,11.5299865540758,5.71527606113668,4.92051830067656,0,10.9763615505484,11.802659820453,8.77928231928187,6.27797446105362,13.2827008569046,6.28228492768558,3.52938892818609,6.14740936462601,7.2826552954673,10.9530231638752,11.0500855029271,11.5634453861859,14.0830441982647,27.0351193911754,31.195437948295,19.8318497055769,25.6175151574413,15.8127820801469,2.85230430298152,1.45072428402269,4.36921938885203,15.9500850342287,8.02293631828519,11.3447860301037,24.2779753031517,25.9205579843296,29.7900759647904,26.4298735013923,22.2323699027785,7.64914759689189,9.88866362566974,7.8152812644071,13.7816050838466,21.9004434033286,18.0419925416751,21.3309382564071,15.7743721013537,35.1350710816678,22.7494597180162,16.9037302916637,18.8815577905926,15.6267193723704,19.82085857989,22.9837208553338,19.9688493233117,25.9815986828482,25.7995154958795,15.106487746146,33.7811428791671,13.5063026407603,17.8773949898868,23.5702868378934,21.3557521198654,23.2999307281626,12.8734528666413,11.3357340160178,5.2175607966302,12.9063581547208,16.9992833426938,7.01614149129162,9.74664626171504,12.9927797258227,18.5386634573912,8.52151612890289,9.35229616570328,13.0735642568826,12.1125341007945,3.84979432242953,2.54805239706646,0,11.0410430915719,11.9079136773296,10.6160133453104,10.3907330544345,3.36619248741323,9.50029690014878,16.654591369549,17.6589977421042,22.3697032338377,16.4287678202359,13.8754674420132,13.3206586809456,9.39340877390621,8.53136205827479,15.0383793831479,22.0002915928476,15.2380647737672,16.0008833534623,7.45567044872489,11.7112318804619,14.2423760633149,9.70736809792647,9.58520996047362,10.1983464268879,8.51370521389534,18.8736205650077,14.640019290196,17.2146462394624,17.2086076990354,18.6672283851141,17.0386196538839,16.2241263067758,14.3593503028946,10.2013715900276,10.6143558542143,11.5743020737561,15.8746940414499,17.2426578325105,13.6847218652065,14.9197769657358,12.858898339601,15.2455327138971,17.1474155944304,14.2286853906459,14.0119195406347,7.75334928688059,10.381116325673,12.9325482132269,9.45360647367033,9.4028084960985,13.5816210029243,13.1362616100206,8.42655824775882,10.808612098818,8.52490498186778,18.2270679831242,21.5763975182609,25.5688127274641,16.3353867553795,21.6440654922144,26.6882105295164,23.950996309292,25.4859731329638,26.0386713478788,30.1144525341669,30.6993157827908,32.022179770613,38.1581967180117,35.7866687924413,33.9542239463741,11.565947171027,16.8763564302026,10.2429822724977,13.7514294665043,13.650448034255,16.953277045812,11.5980715189884,9.68080918192044,7.78323153457046,7.79925067061493,8.54152310780121,8.07024878147653,9.29940272560997,9.54991065797524,10.1381325301942,8.08937467788799,9.51007419448655,11.1519113022446,14.6044283733873,16.5660343284107,13.5249282807697,14.8665469327079,15.7101514605777,14.0271639780637,12.1414151278574,13.8753539100826,19.3108435244891,16.7820142933649,7.70776830426587,7.50802975722423,8.05891879964132,5.8464149220062,8.31726497692862,8.44120059133459,7.63877555344259,7.76779571117189,7.62035565842666,8.78596522201861,51.7565543498476,5.58211421502755,7.48890415474945,8.33510297225469,11.1226396383586,5.78932225636041,6.83586803616437,15.1593129416388,11.5705133273838,14.7678224624414,15.2548661387526,8.37531287209079,9.75978927632656,8.97614780145875,8.19702749352193,11.5161638617363,9.8861956567642,6.22680595919804,7.59813920209941,4.77341893318988,3.01582567878545,6.52686820582452,8.35999264132362,9.3818493743609,22.7981837782665,21.332526959781,12.2951209032507,48.726888950444,13.566853434899,8.58965237452605,9.90947629570875,8.36390792833932,8.68914828921337,8.49229592366497,11.334699646897,9.9366991689846,13.4397844501818,12.5315313404505,8.23252494207958,14.7794451043822,14.8227133011754,6.43383479592888,1.32745138339963,13.595715624679,11.7906187216253,10.1846743068185,7.97315110778086,7.07100840271033,5.68542244970086,7.27067458955011,7.48644494607915,2.52829406348653,3.16255825724996,5.15677716240934,3.74483566329167,14.7650097105674,14.229455216103,12.2172109968008,7.80297028026004,15.161349496176,13.657568709976,11.5696680663548,13.1416156515678,16.7347335982418,5.95426674748397,8.90385765883992,9.84933002845024,11.4594557363496,13.966564248367,9.19189038572343,9.32738677215522,22.2510362412612,3.58828849675491,11.7640514739037,9.07453184111587,6.96963290917357,5.74115756428306,4.57556346413045,9.34881364966204,11.47601909054,11.1941978781583,14.3200592702267,13.4442797271983,8.13277868507395,14.4727156701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| |||
|short_description=p2@Vdac1 | |||
}} |
Revision as of 01:22, 6 August 2015
Short description: | p2@Vdac1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vdac1_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_NM_011694, uc007ivm.1_5end |
EntrezGene: | 22333 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.60e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.60e-11 | 23 |
neural cell | 1.36e-09 | 43 |
ectodermal cell | 1.80e-09 | 44 |
neurectodermal cell | 1.80e-09 | 44 |
neuron | 4.00e-07 | 33 |
neuronal stem cell | 4.00e-07 | 33 |
neuroblast | 4.00e-07 | 33 |
electrically signaling cell | 4.00e-07 | 33 |