FFCP PHASE1:Mm9::chr11:51814250..51814277,-: Difference between revisions
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{{FFCP|EntrezGene=22210|HGNC=|MCL_coexpression_id=528|UniProt=P63147|association_with_transcript=0bp_to_ENSMUST00000109086,ENSMUST00000147833_5end|description=CAGE_peak_3_at_Ube2b_5end|id=chr11:51814250..51814277,-|ontology_enrichment_celltype=CL:0000393!5.06e-08!39;CL:0000211!5.06e-08!39;CL:0000540!3.39e-07!33;CL:0000047!3.39e-07!33;CL:0000031!3.39e-07!33;CL:0000404!3.39e-07!33|ontology_enrichment_celltype_v019_2=CL:0000393,5.06e-08,39;CL:0000211,5.06e-08,39;CL:0000540,3.39e-07,33;CL:0000047,3.39e-07,33;CL:0000031,3.39e-07,33;CL:0000404,3.39e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.89e-18!73;UBERON:0005743!9.89e-18!73;UBERON:0000073!1.12e-16!75;UBERON:0001016!1.12e-16!75;UBERON:0000033!1.28e-16!63;UBERON:0000955!3.68e-16!50;UBERON:0006238!3.68e-16!50;UBERON:0002616!1.04e-15!49;UBERON:0004121!4.97e-15!102;UBERON:0000924!4.97e-15!102;UBERON:0006601!4.97e-15!102;UBERON:0002346!6.01e-15!71;UBERON:0003075!6.01e-15!71;UBERON:0007284!6.01e-15!71;UBERON:0001049!6.91e-15!52;UBERON:0005068!6.91e-15!52;UBERON:0006241!6.91e-15!52;UBERON:0007135!6.91e-15!52;UBERON:0003080!1.36e-12!40;UBERON:0003056!2.72e-12!49;UBERON:0002780!4.36e-12!39;UBERON:0001890!4.36e-12!39;UBERON:0006240!4.36e-12!39;UBERON:0004111!1.26e-11!122;UBERON:0000025!6.42e-11!114;UBERON:0002020!6.57e-11!34;UBERON:0002791!1.43e-10!29;UBERON:0003528!1.43e-10!29;UBERON:0001893!1.43e-10!29;UBERON:0000956!1.20e-08!21;UBERON:0001869!1.20e-08!21;UBERON:0000203!1.20e-08!21;UBERON:0002619!3.74e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.56e-21,92;UBERON:0001017,9.89e-18,73;UBERON:0001016,1.12e-16,75;UBERON:0000073,3.41e-16,54;UBERON:0002346,1.38e-15,64;UBERON:0003075,1.38e-15,64;UBERON:0007284,1.38e-15,64;UBERON:0004121,2.97e-15,95;UBERON:0000924,2.97e-15,95;UBERON:0006601,2.97e-15,95;UBERON:0001049,6.91e-15,52;UBERON:0005068,6.91e-15,52;UBERON:0006241,6.91e-15,52;UBERON:0007135,6.91e-15,52;UBERON:0000955,1.69e-14,47;UBERON:0006238,1.69e-14,47;UBERON:0002616,4.69e-14,46;UBERON:0010371,4.98e-13,73;UBERON:0003080,1.36e-12,40;UBERON:0003056,2.72e-12,49;UBERON:0002780,4.36e-12,39;UBERON:0001890,4.36e-12,39;UBERON:0006240,4.36e-12,39;UBERON:0004111,1.26e-11,122;UBERON:0000025,6.42e-11,114;UBERON:0002020,6.57e-11,34;UBERON:0003528,1.43e-10,29;UBERON:0002791,1.43e-10,29;UBERON:0001893,1.43e-10,29;UBERON:0000956,1.20e-08,21;UBERON:0001869,1.20e-08,21;UBERON:0000203,1.20e-08,21;UBERON:0002619,3.74e-07,17|phase1_expression=16.1750335575842,11.8651638597383,8.18998630901165,9.0739263392049,8.01433167914156,14.6054966563344,10.2789561862031,7.23090611272827,8.869689495555,6.08567768437183,4.10923123741212,4.14815226775749,4.28001824828014,6.20684857174882,8.32774404539157,8.30148596298286,2.09868563438444,11.1989068702174,6.7186072466812,19.5219239827094,28.6595887809105,19.5603173865744,14.3659884026414,11.6794468639187,11.0116454912242,14.3557991028755,12.4920978886132,12.4973314957816,12.7315691035771,9.32511480111744,9.09095093686749,5.08024538767705,3.69038872550742,0,30.6182716936351,26.5975432573588,33.2796050707662,19.2524550138978,23.440060335714,16.7527598071615,27.6468799374577,32.7861832780054,26.7030694167134,32.6072758556745,28.2841638102446,21.6585167550784,15.6478268869608,15.9158364157726,23.286735369854,17.1098311185369,12.8787507895334,15.8127820801469,14.4293041209653,7.97898356212479,7.39406358113421,13.1202312378333,15.7593391966316,21.1425557833751,18.8154308599426,20.6306481916093,13.3104594736298,14.2314703469035,13.3394219416671,13.9484456178617,21.7550599764734,9.9467216092454,18.5752068521411,8.4528027170742,21.2563705232379,25.9211401596846,24.1873705554089,19.4242669394586,17.4486147351775,21.9258530594768,17.2521847832825,18.3843757322004,36.3382407297983,29.3680877595932,32.4109785170674,17.8046488435762,14.6380229763855,18.2319679694866,36.0146068711781,29.2636557216474,29.1844653253707,19.4454866412621,17.0846016958924,21.9951346073855,10.9802980333117,12.9227367782603,12.1743085254705,11.185510400758,21.759082678648,26.445456390253,20.1430689408777,29.1217476613268,34.8302161926745,10.2258193546835,9.61208217030615,9.89350808628953,20.703982707172,14.115912515575,20.3844191765317,14.2213340630666,21.216122019099,19.7620695070577,23.25412447068,25.3488212976313,10.0985774622397,14.8442139064825,12.1439728736295,14.9188084372949,15.2206228188999,16.4287678202359,23.4001527200053,19.4783216560997,15.8204779349999,24.2926919625452,15.9229899350977,23.9414937922166,35.334642953663,26.6681389224372,5.59175283654366,26.0574909340277,28.065858713003,14.8165092020983,20.2487560415005,11.3981518888747,19.8229554233981,31.1564529962031,38.8875512395833,21.6125485634127,40.3272422846081,38.3573185995496,31.7915708176127,33.2594589288903,16.09061948835,20.9003710624956,16.4269792981889,17.2562321826909,13.7927669540466,20.0014830857121,14.0448461248172,17.4817588689429,16.0566137997134,18.1921482804487,17.8970293909082,24.5768202202065,8.62271971731369,12.8592134514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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22210 | |||
|HGNC= | |||
|MCL_coexpression_id=528 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63147 | |||
|association_with_transcript=0bp_to_ENSMUST00000109086,ENSMUST00000147833_5end | |||
|cluster_id=chr11:51814250..51814277,- | |||
|description=CAGE_peak_3_at_Ube2b_5end | |||
|id=chr11:51814250..51814277,- | |||
|ontology_enrichment_celltype=CL:0000393!5.06e-08!39;CL:0000211!5.06e-08!39;CL:0000540!3.39e-07!33;CL:0000047!3.39e-07!33;CL:0000031!3.39e-07!33;CL:0000404!3.39e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.06e-08,39;CL:0000211,5.06e-08,39;CL:0000540,3.39e-07,33;CL:0000047,3.39e-07,33;CL:0000031,3.39e-07,33;CL:0000404,3.39e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.89e-18!73;UBERON:0005743!9.89e-18!73;UBERON:0000073!1.12e-16!75;UBERON:0001016!1.12e-16!75;UBERON:0000033!1.28e-16!63;UBERON:0000955!3.68e-16!50;UBERON:0006238!3.68e-16!50;UBERON:0002616!1.04e-15!49;UBERON:0004121!4.97e-15!102;UBERON:0000924!4.97e-15!102;UBERON:0006601!4.97e-15!102;UBERON:0002346!6.01e-15!71;UBERON:0003075!6.01e-15!71;UBERON:0007284!6.01e-15!71;UBERON:0001049!6.91e-15!52;UBERON:0005068!6.91e-15!52;UBERON:0006241!6.91e-15!52;UBERON:0007135!6.91e-15!52;UBERON:0003080!1.36e-12!40;UBERON:0003056!2.72e-12!49;UBERON:0002780!4.36e-12!39;UBERON:0001890!4.36e-12!39;UBERON:0006240!4.36e-12!39;UBERON:0004111!1.26e-11!122;UBERON:0000025!6.42e-11!114;UBERON:0002020!6.57e-11!34;UBERON:0002791!1.43e-10!29;UBERON:0003528!1.43e-10!29;UBERON:0001893!1.43e-10!29;UBERON:0000956!1.20e-08!21;UBERON:0001869!1.20e-08!21;UBERON:0000203!1.20e-08!21;UBERON:0002619!3.74e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.56e-21,92;UBERON:0001017,9.89e-18,73;UBERON:0001016,1.12e-16,75;UBERON:0000073,3.41e-16,54;UBERON:0002346,1.38e-15,64;UBERON:0003075,1.38e-15,64;UBERON:0007284,1.38e-15,64;UBERON:0004121,2.97e-15,95;UBERON:0000924,2.97e-15,95;UBERON:0006601,2.97e-15,95;UBERON:0001049,6.91e-15,52;UBERON:0005068,6.91e-15,52;UBERON:0006241,6.91e-15,52;UBERON:0007135,6.91e-15,52;UBERON:0000955,1.69e-14,47;UBERON:0006238,1.69e-14,47;UBERON:0002616,4.69e-14,46;UBERON:0010371,4.98e-13,73;UBERON:0003080,1.36e-12,40;UBERON:0003056,2.72e-12,49;UBERON:0002780,4.36e-12,39;UBERON:0001890,4.36e-12,39;UBERON:0006240,4.36e-12,39;UBERON:0004111,1.26e-11,122;UBERON:0000025,6.42e-11,114;UBERON:0002020,6.57e-11,34;UBERON:0003528,1.43e-10,29;UBERON:0002791,1.43e-10,29;UBERON:0001893,1.43e-10,29;UBERON:0000956,1.20e-08,21;UBERON:0001869,1.20e-08,21;UBERON:0000203,1.20e-08,21;UBERON:0002619,3.74e-07,17 | |||
|phase1_expression=16.1750335575842,11.8651638597383,8.18998630901165,9.0739263392049,8.01433167914156,14.6054966563344,10.2789561862031,7.23090611272827,8.869689495555,6.08567768437183,4.10923123741212,4.14815226775749,4.28001824828014,6.20684857174882,8.32774404539157,8.30148596298286,2.09868563438444,11.1989068702174,6.7186072466812,19.5219239827094,28.6595887809105,19.5603173865744,14.3659884026414,11.6794468639187,11.0116454912242,14.3557991028755,12.4920978886132,12.4973314957816,12.7315691035771,9.32511480111744,9.09095093686749,5.08024538767705,3.69038872550742,0,30.6182716936351,26.5975432573588,33.2796050707662,19.2524550138978,23.440060335714,16.7527598071615,27.6468799374577,32.7861832780054,26.7030694167134,32.6072758556745,28.2841638102446,21.6585167550784,15.6478268869608,15.9158364157726,23.286735369854,17.1098311185369,12.8787507895334,15.8127820801469,14.4293041209653,7.97898356212479,7.39406358113421,13.1202312378333,15.7593391966316,21.1425557833751,18.8154308599426,20.6306481916093,13.3104594736298,14.2314703469035,13.3394219416671,13.9484456178617,21.7550599764734,9.9467216092454,18.5752068521411,8.4528027170742,21.2563705232379,25.9211401596846,24.1873705554089,19.4242669394586,17.4486147351775,21.9258530594768,17.2521847832825,18.3843757322004,36.3382407297983,29.3680877595932,32.4109785170674,17.8046488435762,14.6380229763855,18.2319679694866,36.0146068711781,29.2636557216474,29.1844653253707,19.4454866412621,17.0846016958924,21.9951346073855,10.9802980333117,12.9227367782603,12.1743085254705,11.185510400758,21.759082678648,26.445456390253,20.1430689408777,29.1217476613268,34.8302161926745,10.2258193546835,9.61208217030615,9.89350808628953,20.703982707172,14.115912515575,20.3844191765317,14.2213340630666,21.216122019099,19.7620695070577,23.25412447068,25.3488212976313,10.0985774622397,14.8442139064825,12.1439728736295,14.9188084372949,15.2206228188999,16.4287678202359,23.4001527200053,19.4783216560997,15.8204779349999,24.2926919625452,15.9229899350977,23.9414937922166,35.334642953663,26.6681389224372,5.59175283654366,26.0574909340277,28.065858713003,14.8165092020983,20.2487560415005,11.3981518888747,19.8229554233981,31.1564529962031,38.8875512395833,21.6125485634127,40.3272422846081,38.3573185995496,31.7915708176127,33.2594589288903,16.09061948835,20.9003710624956,16.4269792981889,17.2562321826909,13.7927669540466,20.0014830857121,14.0448461248172,17.4817588689429,16.0566137997134,18.1921482804487,17.8970293909082,24.5768202202065,8.62271971731369,12.8592134514117,11.9646764431485,13.1517439456545,20.5754964426942,13.5818344943645,16.8741351854514,19.5053581482123,6.31991868581911,9.52187256324446,14.4923384691752,13.8774267598786,18.7620847984877,23.0479438670099,18.4660893756464,23.0214151144462,26.5339434166291,24.6485981435432,24.681152928765,35.846960106721,22.2155797383199,33.9826650643727,45.3985333456792,51.1699955988663,39.2994706370981,65.7611451925822,39.3242203814918,19.4489717396848,14.2080076683033,10.5780226665418,15.3567540385368,15.7920936865098,10.9537342123779,11.6976444281539,12.6755484991576,11.6037631928661,15.1849299694244,13.8347121968169,17.3421294072186,19.8956472041151,15.4021628824105,13.4822911298133,17.5071820398502,19.9141273254367,14.9837641752935,11.9960938240215,14.6520056375005,12.2190796707189,12.2190066915604,11.5022744620122,10.560501699751,14.7610147979602,16.9558626068685,19.2499575718009,16.008441862706,5.6727335943472,6.2898878436225,5.17182858485164,8.72298521970563,6.75296047306767,8.14802725700543,8.34318798607351,17.6727397184789,14.2771934857802,5.75072826109418,15.6299198020771,15.601883655728,13.3866805311969,13.6342034276653,20.7450714186248,15.5192679739948,10.8010104709176,11.8964432802679,12.3913912615887,13.6120344007331,10.7204004762762,10.7119638398706,13.6593553500459,10.2462843669024,10.85176979279,12.437471955284,14.2561083802692,14.6782234586011,15.0435020924772,25.6345182696763,17.4049818821987,5.90117127622843,12.1412168374082,27.775252067888,32.5848488726325,14.0984053023941,96.9488360464792,23.0321000173867,19.5219372148319,24.3428439438063,18.6395662402991,20.2746793414979,26.0430408325726,24.2886421004937,23.9649803487276,16.9973744517005,26.9909905794318,16.1811697137426,10.8620018237026,12.5422958702254,16.0021019283359,10.619611067197,12.867373716214,12.9999129494843,9.9960692270626,7.08724542913855,10.1453598821496,11.3708448994017,9.81541069589265,8.91243445961803,10.7452497698177,10.5418608574999,10.3135543248187,21.1072555567349,18.1861704971623,13.3239444296237,22.7197257133488,22.5222096725687,20.155676389034,26.4923923169415,14.6143175575008,11.7335854031855,9.95610733059955,20.5091410191115,20.940554123568,15.8235138161987,12.0625849856312,12.7728408083356,10.1767357841938,16.9058885245313,24.1052892613663,9.3978984438819,8.46186158649212,12.0376442790313,7.15800136617826,6.83471138605126,8.69357058184786,15.298058699447,15.6745626602497,14.7873971970733,17.184071124272,10.9135917785492,13.0124458961183,14.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| |||
|short_description=p3@Ube2b | |||
}} |
Revision as of 00:57, 6 August 2015
Short description: | p3@Ube2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ube2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:528 |
Association with transcript: | 0bp_to_ENSMUST00000109086, ENSMUST00000147833_5end |
EntrezGene: | 22210 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.06e-08 | 39 |
electrically active cell | 5.06e-08 | 39 |
neuron | 3.39e-07 | 33 |
neuronal stem cell | 3.39e-07 | 33 |
neuroblast | 3.39e-07 | 33 |
electrically signaling cell | 3.39e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.56e-21 | 92 |
central nervous system | 9.89e-18 | 73 |
nervous system | 1.12e-16 | 75 |
regional part of nervous system | 3.41e-16 | 54 |
neurectoderm | 1.38e-15 | 64 |
neural plate | 1.38e-15 | 64 |
presumptive neural plate | 1.38e-15 | 64 |
ectoderm-derived structure | 2.97e-15 | 95 |
ectoderm | 2.97e-15 | 95 |
presumptive ectoderm | 2.97e-15 | 95 |
neural tube | 6.91e-15 | 52 |
neural rod | 6.91e-15 | 52 |
future spinal cord | 6.91e-15 | 52 |
neural keel | 6.91e-15 | 52 |
brain | 1.69e-14 | 47 |
future brain | 1.69e-14 | 47 |
regional part of brain | 4.69e-14 | 46 |
ecto-epithelium | 4.98e-13 | 73 |
anterior neural tube | 1.36e-12 | 40 |
pre-chordal neural plate | 2.72e-12 | 49 |
regional part of forebrain | 4.36e-12 | 39 |
forebrain | 4.36e-12 | 39 |
future forebrain | 4.36e-12 | 39 |
anatomical conduit | 1.26e-11 | 122 |
tube | 6.42e-11 | 114 |
gray matter | 6.57e-11 | 34 |
brain grey matter | 1.43e-10 | 29 |
regional part of telencephalon | 1.43e-10 | 29 |
telencephalon | 1.43e-10 | 29 |
cerebral cortex | 1.20e-08 | 21 |
cerebral hemisphere | 1.20e-08 | 21 |
pallium | 1.20e-08 | 21 |
regional part of cerebral cortex | 3.74e-07 | 17 |