Personal tools

FFCP PHASE1:Mm9::chrX:133372165..133372186,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=212
|MCL_coexpression_id=212
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chrX:133372165..133372186,+
|description=CAGE_peak_at_chrX:133372165..133372186,+
|description=CAGE_peak_at_chrX:133372165..133372186,+
|id=chrX:133372165..133372186,+
|id=chrX:133372165..133372186,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000540,5.45e-11,33;CL:0000047,5.45e-11,33;CL:0000031,5.45e-11,33;CL:0000404,5.45e-11,33;CL:0002319,1.72e-09,43;CL:0000221,3.69e-09,44;CL:0000133,3.69e-09,44;CL:0000107,8.11e-09,9;CL:0000393,1.37e-08,39;CL:0000211,1.37e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.14e-15!75;UBERON:0001016!4.14e-15!75;UBERON:0004121!4.49e-15!102;UBERON:0000924!4.49e-15!102;UBERON:0006601!4.49e-15!102;UBERON:0001017!4.51e-14!73;UBERON:0005743!4.51e-14!73;UBERON:0002346!1.35e-13!71;UBERON:0003075!1.35e-13!71;UBERON:0007284!1.35e-13!71;UBERON:0001049!3.33e-10!52;UBERON:0005068!3.33e-10!52;UBERON:0006241!3.33e-10!52;UBERON:0007135!3.33e-10!52;UBERON:0000033!9.06e-10!63;UBERON:0000955!9.44e-10!50;UBERON:0006238!9.44e-10!50;UBERON:0002616!2.97e-09!49;UBERON:0002021!2.04e-08!10;UBERON:0000411!2.04e-08!10;UBERON:0001950!2.04e-08!10;UBERON:0002020!3.78e-08!34;UBERON:0003056!2.18e-07!49
|ontology_enrichment_uberon=UBERON:0000073!4.14e-15!75;UBERON:0001016!4.14e-15!75;UBERON:0004121!4.49e-15!102;UBERON:0000924!4.49e-15!102;UBERON:0006601!4.49e-15!102;UBERON:0001017!4.51e-14!73;UBERON:0005743!4.51e-14!73;UBERON:0002346!1.35e-13!71;UBERON:0003075!1.35e-13!71;UBERON:0007284!1.35e-13!71;UBERON:0001049!3.33e-10!52;UBERON:0005068!3.33e-10!52;UBERON:0006241!3.33e-10!52;UBERON:0007135!3.33e-10!52;UBERON:0000033!9.06e-10!63;UBERON:0000955!9.44e-10!50;UBERON:0006238!9.44e-10!50;UBERON:0002616!2.97e-09!49;UBERON:0002021!2.04e-08!10;UBERON:0000411!2.04e-08!10;UBERON:0001950!2.04e-08!10;UBERON:0002020!3.78e-08!34;UBERON:0003056!2.18e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.41e-30,75;UBERON:0001017,1.13e-27,73;UBERON:0004121,5.49e-24,95;UBERON:0000924,5.49e-24,95;UBERON:0006601,5.49e-24,95;UBERON:0000073,6.46e-22,54;UBERON:0002346,7.74e-21,64;UBERON:0003075,7.74e-21,64;UBERON:0007284,7.74e-21,64;UBERON:0001049,2.22e-19,52;UBERON:0005068,2.22e-19,52;UBERON:0006241,2.22e-19,52;UBERON:0007135,2.22e-19,52;UBERON:0010371,4.21e-17,73;UBERON:0002021,1.41e-16,10;UBERON:0000411,1.41e-16,10;UBERON:0001950,1.41e-16,10;UBERON:0000955,1.17e-15,47;UBERON:0006238,1.17e-15,47;UBERON:0002020,2.58e-15,34;UBERON:0002616,1.21e-14,46;UBERON:0010314,1.66e-14,92;UBERON:0003528,8.38e-12,29;UBERON:0002791,8.38e-12,29;UBERON:0001893,8.38e-12,29;UBERON:0003080,3.09e-11,40;UBERON:0000010,4.29e-11,11;UBERON:0002619,1.61e-10,17;UBERON:0003056,2.02e-10,49;UBERON:0002780,2.74e-10,39;UBERON:0001890,2.74e-10,39;UBERON:0006240,2.74e-10,39;UBERON:0003076,6.13e-10,12;UBERON:0003057,6.13e-10,12;UBERON:0000956,1.55e-09,21;UBERON:0001869,1.55e-09,21;UBERON:0000203,1.55e-09,21;UBERON:0002410,8.11e-09,9;UBERON:0002950,1.94e-07,4;UBERON:0001891,1.94e-07,4;UBERON:0009616,1.94e-07,4;UBERON:0010286,1.94e-07,4
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,7.14127461009509,4.8591079009355,0.122490799214954,0.0958454710182364,0,78.182275509566,82.3583330649461,112.900801943339,0,0.182975287204819,0.52091337055676,38.5272538621906,54.0252105630413,140.268791459112,10.0173719061047,7.26095572075425,0.372798891650601,3.10477392666055,7.48158445057177,0,0,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.693941307064543,0.608930956624282,0.230615497256059,2.11011696773672,2.70454026412121,0,0,0,0,0.323533699894818,0.441683036920787,0,0,31.6203260772471,72.6780072642689,0,0,0,0,34.7514283419189,44.8350590762254,0.753926112677186,14.0797699355744,76.9703526564295,71.2712992839291,184.630557371108,0.81471491080253,0,0.252722758433675,6.31325567659422,0.130120442962704,0,0,0.90422890701429,0.544291993210623,0.2562274405697,0.562210347358373,36.9945820156792,0,0.189106080167819,0.351902248327898,0,0,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0.36012412292203,0,0.393528463494808,0.925602677324269,0.465067889500816,0,0.467061369468678,0,1.80584210487005,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,19.1363853193356,0.102904612379284,0,0,0,0.928946687441754,0,0,0,0,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0,0.387904974335251,1.1221731182451,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.678980343100753,0,0,0,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0.81931657357869,1.03610989119537,0.289298117163023,0,0.54390568381871,0,0,63.5780336351656,337.100810639176,0,0.252470927204373,1.57754109708128,1.56175497718655,4.30846795465598,2.15071918157297,4.90157082981267,2.83076530788832,4.04810701674894,3.50707029493574,0.395287777946524,14.7807805554031,0,0.178065603667255,0.651547837414304,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,0,0,0,0.680879211507576,0.36012218806262,0,0.214337035031592,0,0,0.493647061806363,0,0,0,0,0,0.645857706783622,0.301564624640779,0.119372344003136,0.164140899745061,0.582961673259701,102.354766709801,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.436725127492355,0.404593039154462,0.578574190077352,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0.129159823477731,1.520605129417,2.11243029562357,3.9061315453185,0.314578033277133,1.44950472495604,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0.201932899896295,0.304827226619999,0.201652370273681,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,127.06916458884,103.112852977608,124.318326416349,127.343208116672,49.3259414234862,90.6472676867641,60.7520250208625,36.0256962579376,20.3914084042892,21.2281727818246,0.207574695168353,0,0.341467211508268,0,0,0,0,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0.412085900803307,0.441596760403192,1.02860775715625,0.70990322463735,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.548783918618318,0.526139422875686,0,0.561142271657738,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,0.192906610981141,0,0.467863216890817,0.214871054048298,0.191288332068843,1.54413993383661,1.85494268496337
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,7.14127461009509,4.8591079009355,0.122490799214954,0.0958454710182364,0,78.182275509566,82.3583330649461,112.900801943339,0,0.182975287204819,0.52091337055676,38.5272538621906,54.0252105630413,140.268791459112,10.0173719061047,7.26095572075425,0.372798891650601,3.10477392666055,7.48158445057177,0,0,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.693941307064543,0.608930956624282,0.230615497256059,2.11011696773672,2.70454026412121,0,0,0,0,0.323533699894818,0.441683036920787,0,0,31.6203260772471,72.6780072642689,0,0,0,0,34.7514283419189,44.8350590762254,0.753926112677186,14.0797699355744,76.9703526564295,71.2712992839291,184.630557371108,0.81471491080253,0,0.252722758433675,6.31325567659422,0.130120442962704,0,0,0.90422890701429,0.544291993210623,0.2562274405697,0.562210347358373,36.9945820156792,0,0.189106080167819,0.351902248327898,0,0,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0.36012412292203,0,0.393528463494808,0.925602677324269,0.465067889500816,0,0.467061369468678,0,1.80584210487005,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,19.1363853193356,0.102904612379284,0,0,0,0.928946687441754,0,0,0,0,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0,0.387904974335251,1.1221731182451,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.678980343100753,0,0,0,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0.81931657357869,1.03610989119537,0.289298117163023,0,0.54390568381871,0,0,63.5780336351656,337.100810639176,0,0.252470927204373,1.57754109708128,1.56175497718655,4.30846795465598,2.15071918157297,4.90157082981267,2.83076530788832,4.04810701674894,3.50707029493574,0.395287777946524,14.7807805554031,0,0.178065603667255,0.651547837414304,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,0,0,0,0.680879211507576,0.36012218806262,0,0.214337035031592,0,0,0.493647061806363,0,0,0,0,0,0.645857706783622,0.301564624640779,0.119372344003136,0.164140899745061,0.582961673259701,102.354766709801,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.436725127492355,0.404593039154462,0.578574190077352,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0.129159823477731,1.520605129417,2.11243029562357,3.9061315453185,0.314578033277133,1.44950472495604,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0.201932899896295,0.304827226619999,0.201652370273681,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,127.06916458884,103.112852977608,124.318326416349,127.343208116672,49.3259414234862,90.6472676867641,60.7520250208625,36.0256962579376,20.3914084042892,21.2281727818246,0.207574695168353,0,0.341467211508268,0,0,0,0,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0.412085900803307,0.441596760403192,1.02860775715625,0.70990322463735,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.548783918618318,0.526139422875686,0,0.561142271657738,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,0.192906610981141,0,0.467863216890817,0.214871054048298,0.191288332068843,1.54413993383661,1.85494268496337
|short_description=p@chrX:133372165..133372186,+
|short_description=p@chrX:133372165..133372186,+
}}
}}

Latest revision as of 00:34, 6 August 2015

Short description:p@chrX:133372165..133372186, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:133372165..133372186, +
Coexpression cluster:MCL_coexpression_mm9:212
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chrX:133372165..133372186+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D378.18
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F382.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7112.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E438.53
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E554.03
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6140.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D93.10
Mouse Schwann, donor2.CNhs12573.11746-123F97.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B231.62
cerebellum, neonate N30.CNhs11135.1395-42I272.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A434.75
corpus striatum, adult.CNhs10487.19-21D844.84
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F276.97
diencephalon, adult.CNhs10482.20-12F271.27
diencephalon, neonate N30.CNhs11201.1388-42B2184.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A236.99
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E819.14
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C263.58
medulla oblongata, neonate N30.CNhs11200.1396-42A3337.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C9102.35
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1127.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2103.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3124.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7127.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A449.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A590.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A660.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.03
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.45e-1133
neuronal stem cell5.45e-1133
neuroblast5.45e-1133
electrically signaling cell5.45e-1133
neural cell1.72e-0943
ectodermal cell3.69e-0944
neurectodermal cell3.69e-0944
autonomic neuron8.11e-099
electrically responsive cell1.37e-0839
electrically active cell1.37e-0839

Uber anatomy
Ontology termp-valuen
nervous system6.41e-3075
central nervous system1.13e-2773
ectoderm-derived structure5.49e-2495
ectoderm5.49e-2495
presumptive ectoderm5.49e-2495
regional part of nervous system6.46e-2254
neurectoderm7.74e-2164
neural plate7.74e-2164
presumptive neural plate7.74e-2164
neural tube2.22e-1952
neural rod2.22e-1952
future spinal cord2.22e-1952
neural keel2.22e-1952
ecto-epithelium4.21e-1773
occipital lobe1.41e-1610
visual cortex1.41e-1610
neocortex1.41e-1610
brain1.17e-1547
future brain1.17e-1547
gray matter2.58e-1534
regional part of brain1.21e-1446
structure with developmental contribution from neural crest1.66e-1492
brain grey matter8.38e-1229
regional part of telencephalon8.38e-1229
telencephalon8.38e-1229
anterior neural tube3.09e-1140
peripheral nervous system4.29e-1111
regional part of cerebral cortex1.61e-1017
pre-chordal neural plate2.02e-1049
regional part of forebrain2.74e-1039
forebrain2.74e-1039
future forebrain2.74e-1039
posterior neural tube6.13e-1012
chordal neural plate6.13e-1012
cerebral cortex1.55e-0921
cerebral hemisphere1.55e-0921
pallium1.55e-0921
autonomic nervous system8.11e-099
regional part of midbrain1.94e-074
midbrain1.94e-074
presumptive midbrain1.94e-074
midbrain neural tube1.94e-074
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:133372165..133372186,%2B&oldid=3959235"