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FFCP PHASE1:Mm9::chr18:63851963..63851992,-: Difference between revisions

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{{FFCP|EntrezGene=53382|HGNC=|MCL_coexpression_id=3154|UniProt=Q8CDN6,Q3UNH3|association_with_transcript=20bp_to_ENSMUST00000025476,NM_016792,uc008fdx.1,uc008fdy.1_5end|description=CAGE_peak_1_at_Txnl1_5end|id=chr18:63851963..63851992,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.92e-10!47;UBERON:0002107!4.82e-10!22;UBERON:0007499!4.82e-10!22;UBERON:0006925!4.82e-10!22;UBERON:0009497!4.82e-10!22;UBERON:0000015!4.82e-10!22;UBERON:0002423!4.82e-10!22;UBERON:0006235!4.82e-10!22;UBERON:0008835!4.82e-10!22;UBERON:0003894!4.82e-10!22;UBERON:0004161!4.82e-10!22;UBERON:0008836!4.82e-10!22;UBERON:0002365!1.76e-09!25;UBERON:0002330!1.76e-09!25;UBERON:0009854!8.46e-09!23;UBERON:0009856!8.46e-09!23;UBERON:0005256!3.87e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.92e-10,47;UBERON:0002107,4.82e-10,22;UBERON:0007499,4.82e-10,22;UBERON:0006925,4.82e-10,22;UBERON:0009497,4.82e-10,22;UBERON:0000015,4.82e-10,22;UBERON:0002423,4.82e-10,22;UBERON:0006235,4.82e-10,22;UBERON:0008835,4.82e-10,22;UBERON:0003894,4.82e-10,22;UBERON:0004161,4.82e-10,22;UBERON:0008836,4.82e-10,22;UBERON:0002365,1.76e-09,25;UBERON:0002330,1.76e-09,25;UBERON:0005256,2.88e-09,45;UBERON:0009854,8.46e-09,23;UBERON:0009856,8.46e-09,23|phase1_expression=62.938496912184,82.7071716105286,91.9098463566863,62.307627529207,67.1200278128105,88.8081348413897,88.7728034262998,31.5060909197446,128.117737158017,110.010327371337,136.118284739276,133.139733363216,25.3377080298184,22.7293046289393,194.202991138531,145.579717253285,257.438771151158,28.5493259649205,30.7136331276855,38.6194583136207,46.6887662929373,91.3476751048145,112.054709540603,87.8358401135803,93.5989866754054,90.7286503301732,124.059454893814,99.116767035509,86.0806090137374,95.5194191790138,113.526021455516,150.502269609933,158.071650409235,79.2408405077194,93.0102215599104,120.353883239548,97.7971216496748,62.7797446105362,89.8535646202371,63.8698967648034,61.7643062432565,68.987593980803,59.7177734228319,93.6672325738295,100.768669632197,89.3872683027389,75.8919604017598,84.8117858319937,73.3751850333136,94.687360849176,94.4908345971197,110.689474561028,37.4155211508752,50.0499877987828,43.0200062902354,171.849303272013,117.765243814829,157.795660236897,53.2092292060742,57.1310257613796,62.7493089471117,87.7607338059052,87.1508900188917,71.0920776652305,66.2540462919873,61.8117700003107,65.912024314049,39.5744854481201,53.9185984004084,49.8171912443939,53.6328651446024,79.6966246486612,75.0953039235486,55.1208596467293,52.5233181179935,68.9414089957516,106.812404569407,89.5088239977166,107.831786345883,51.699424790236,48.5799387528795,44.7985498678814,112.231565598555,105.236608075924,100.694045284918,72.7732606119959,70.0468669531586,67.8493982804094,155.995958266359,105.573469469179,67.2485613787892,139.388668070985,367.864491535893,190.515226648149,174.789856293423,200.716045419606,127.523533479631,95.2705503211343,109.369907937808,122.255492780578,64.6471296774964,55.1803852881567,63.7013099266614,85.3280043783997,258.706794008401,252.599785878673,247.706978057244,118.180315509227,50.7518251948457,103.018844510988,93.161620473415,84.032472014151,95.7054313612643,107.615965354573,97.1282720940922,91.7366116706631,417.265105535623,86.759614151947,137.114635552231,103.530783966342,101.807940010241,97.9448011333149,39.1422698558057,60.8984057784018,46.9160623262139,89.1545122677984,116.939561517778,156.574612789279,114.87148527405,85.2308738213441,72.285095245343,28.3978835775074,73.8753360817175,69.2988889365196,86.439826536777,66.3566765947129,89.1094433690267,76.3858799545971,99.3200440644342,133.209694776138,87.831298999825,90.1216249379214,92.5519347199495,75.653818553529,68.7849006419925,58.6760838904612,64.0919795988545,72.6956471776634,89.2451490741967,83.3957813540083,75.834934514662,103.241189973388,76.4629935370394,87.759545963586,83.3417652452171,78.8175696601233,146.762556148466,148.232394498076,119.348669746149,99.0061192719699,99.908101551947,94.5325822670328,80.7299548345567,91.8888962260376,83.7670422978464,89.525568728907,72.9703651806964,94.4631619750401,87.0521606042312,87.829593282316,96.7961585977517,98.538791524674,103.408104302085,112.330772502431,73.3911920488804,43.5286510364373,109.368617167637,114.507095365315,91.9272359806858,86.3920419320831,86.8566689310909,81.8835109970771,75.386156863411,81.4165679761753,80.1954114010225,83.3376710903495,72.3845401344776,68.2420699101147,72.9165685825509,87.1854826394595,91.4263950969957,87.4230189586672,93.1269393679631,75.0612727845918,69.8787961173099,72.2962213850866,66.5257030984956,65.0159050383253,57.1658295603286,69.2291594024334,70.1784313450945,73.7915040252367,178.760934133551,175.020515896183,173.758151680071,168.196860063871,186.631311677423,172.200492063226,167.798436323956,157.369787185593,122.574231441927,130.691232677527,70.4464211984037,116.480116620242,112.957637667471,1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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:53382
|HGNC=
|MCL_coexpression_id=3154
|TSSclassifier=NA
|UniProt=uniprot:Q8CDN6,uniprot:Q3UNH3
|association_with_transcript=20bp_to_ENSMUST00000025476,NM_016792,uc008fdx.1,uc008fdy.1_5end
|cluster_id=chr18:63851963..63851992,-
|description=CAGE_peak_1_at_Txnl1_5end
|id=chr18:63851963..63851992,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.92e-10,47;UBERON:0002107,4.82e-10,22;UBERON:0007499,4.82e-10,22;UBERON:0006925,4.82e-10,22;UBERON:0009497,4.82e-10,22;UBERON:0000015,4.82e-10,22;UBERON:0002423,4.82e-10,22;UBERON:0006235,4.82e-10,22;UBERON:0008835,4.82e-10,22;UBERON:0003894,4.82e-10,22;UBERON:0004161,4.82e-10,22;UBERON:0008836,4.82e-10,22;UBERON:0002365,1.76e-09,25;UBERON:0002330,1.76e-09,25;UBERON:0005256,2.88e-09,45;UBERON:0009854,8.46e-09,23;UBERON:0009856,8.46e-09,23
|phase1_expression=62.938496912184,82.7071716105286,91.9098463566863,62.307627529207,67.1200278128105,88.8081348413897,88.7728034262998,31.5060909197446,128.117737158017,110.010327371337,136.118284739276,133.139733363216,25.3377080298184,22.7293046289393,194.202991138531,145.579717253285,257.438771151158,28.5493259649205,30.7136331276855,38.6194583136207,46.6887662929373,91.3476751048145,112.054709540603,87.8358401135803,93.5989866754054,90.7286503301732,124.059454893814,99.116767035509,86.0806090137374,95.5194191790138,113.526021455516,150.502269609933,158.071650409235,79.2408405077194,93.0102215599104,120.353883239548,97.7971216496748,62.7797446105362,89.8535646202371,63.8698967648034,61.7643062432565,68.987593980803,59.7177734228319,93.6672325738295,100.768669632197,89.3872683027389,75.8919604017598,84.8117858319937,73.3751850333136,94.687360849176,94.4908345971197,110.689474561028,37.4155211508752,50.0499877987828,43.0200062902354,171.849303272013,117.765243814829,157.795660236897,53.2092292060742,57.1310257613796,62.7493089471117,87.7607338059052,87.1508900188917,71.0920776652305,66.2540462919873,61.8117700003107,65.912024314049,39.5744854481201,53.9185984004084,49.8171912443939,53.6328651446024,79.6966246486612,75.0953039235486,55.1208596467293,52.5233181179935,68.9414089957516,106.812404569407,89.5088239977166,107.831786345883,51.699424790236,48.5799387528795,44.7985498678814,112.231565598555,105.236608075924,100.694045284918,72.7732606119959,70.0468669531586,67.8493982804094,155.995958266359,105.573469469179,67.2485613787892,139.388668070985,367.864491535893,190.515226648149,174.789856293423,200.716045419606,127.523533479631,95.2705503211343,109.369907937808,122.255492780578,64.6471296774964,55.1803852881567,63.7013099266614,85.3280043783997,258.706794008401,252.599785878673,247.706978057244,118.180315509227,50.7518251948457,103.018844510988,93.161620473415,84.032472014151,95.7054313612643,107.615965354573,97.1282720940922,91.7366116706631,417.265105535623,86.759614151947,137.114635552231,103.530783966342,101.807940010241,97.9448011333149,39.1422698558057,60.8984057784018,46.9160623262139,89.1545122677984,116.939561517778,156.574612789279,114.87148527405,85.2308738213441,72.285095245343,28.3978835775074,73.8753360817175,69.2988889365196,86.439826536777,66.3566765947129,89.1094433690267,76.3858799545971,99.3200440644342,133.209694776138,87.831298999825,90.1216249379214,92.5519347199495,75.653818553529,68.7849006419925,58.6760838904612,64.0919795988545,72.6956471776634,89.2451490741967,83.3957813540083,75.834934514662,103.241189973388,76.4629935370394,87.759545963586,83.3417652452171,78.8175696601233,146.762556148466,148.232394498076,119.348669746149,99.0061192719699,99.908101551947,94.5325822670328,80.7299548345567,91.8888962260376,83.7670422978464,89.525568728907,72.9703651806964,94.4631619750401,87.0521606042312,87.829593282316,96.7961585977517,98.538791524674,103.408104302085,112.330772502431,73.3911920488804,43.5286510364373,109.368617167637,114.507095365315,91.9272359806858,86.3920419320831,86.8566689310909,81.8835109970771,75.386156863411,81.4165679761753,80.1954114010225,83.3376710903495,72.3845401344776,68.2420699101147,72.9165685825509,87.1854826394595,91.4263950969957,87.4230189586672,93.1269393679631,75.0612727845918,69.8787961173099,72.2962213850866,66.5257030984956,65.0159050383253,57.1658295603286,69.2291594024334,70.1784313450945,73.7915040252367,178.760934133551,175.020515896183,173.758151680071,168.196860063871,186.631311677423,172.200492063226,167.798436323956,157.369787185593,122.574231441927,130.691232677527,70.4464211984037,116.480116620242,112.957637667471,145.738012575483,172.042119567514,170.302563041269,67.2501612206441,98.3460427088816,87.8381223022519,75.5365631699587,71.8152159762816,60.1347464216119,53.7978628402391,59.5157625966286,50.9161515462997,47.1719788951891,42.2555136942341,43.5876417143863,49.0425348499143,47.1555930975728,79.9193804878143,120.203156123935,96.8775617847501,84.9885178618576,83.1652056136762,91.5423272285107,105.082299986449,120.428632276486,124.625746669421,125.330836919221,94.5708716046987,98.9330823523565,87.5598789143809,80.1106582132396,110.108510855571,101.705038553137,103.565397821989,59.4444435380343,94.1062764930821,60.720370850534,77.6970796116558,58.5643936552501,108.85101343877,85.4587839265535,99.7667737983679,143.339860614483,108.080492794363,133.426854207665,104.405030439961,89.7928311809439,99.4627685693372,122.622262079097,158.127912862498,144.389760547462,100.429683697367,70.9440710483362,53.9425711374086,70.7312215604255,75.7242797652508,55.651071091846,74.5407063327608,57.2394104335447,106.306283752861,151.248098596768,201.78348422029,85.9057377825111,79.9248912144732,81.0002581785133,67.2066296737658,80.7573226745701,82.4890767662478,81.5871328846243,116.363069823338,74.2992724667601,104.264518909148,142.97165886656,142.435385285308,120.108540933424,143.631773344808,143.170335727102,137.094374013988,97.3764030375416,86.9923982348122,89.4605655358134,74.9557065303301,73.8081684931075,88.2184757534558,87.257232110979,79.7605847749492,86.9029727386978,59.3636577676411,87.6088431452565,24.8024893021044,74.0106902917695,74.4563207056939,85.752974059725,72.7169806179626,79.7472912316473,75.8127761651571,71.2217985096407,53.1636876238354,33.0970245531628,34.275570744686,42.6615012848041,87.9827434359313,77.1359288307853,78.4721770785882,75.3702388760097,64.1740775943486,47.8377889089476,53.9066774187207,42.8097747780146,48.7723562591999,44.7668262007572,48.0467352046979,41.3710919053417,31.439886686842,116.992877945449,161.383788102945,179.337999362342,196.257116529608,69.9346330396529,99.8470769400288,60.2568843839302,70.7415650960917,99.8128487030373,83.5832727073258,79.1759406792344,79.6324763680761,73.0376024960672,73.3038296154587,61.1869056885657,83.7027900287439,95.918416286759,104.675896475351,89.5725339330648,105.447945145523,95.7659696162474,94.0742167705279,103.320354754025,124.929444926277,97.2532159700575,80.4533154641847,73.966585548763,85.6854289610147,81.8738966114704,74.5229141677305,80.3548214304685,72.2912437667492,75.421629532936,75.1255933939422,82.8751022832548,74.5136215825421,81.7935094766109,70.0546031365621,94.5017067262831,83.6600975820414,83.7685805072073,74.3920912635641,87.0625035627648,86.3924112212735,78.6069707313675,81.220019955511,85.4976562172989,73.4700255906112,89.2216211935804,87.6712783937647,78.7050814180752,96.9877572312164,88.3139994760006,83.1427493328719,54.2088954125343,81.6421313474475,84.6591952950295,81.1062527971896,89.3395247434038,108.977882741598
|short_description=p1@Txnl1
}}

Revision as of 00:15, 6 August 2015

Short description:p1@Txnl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Txnl1_5end
Coexpression cluster:MCL_coexpression_mm9:3154
Association with transcript: 20bp_to_ENSMUST00000025476, NM_016792, uc008fdx.1, uc008fdy.1_5end
EntrezGene:53382
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Txnl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G762.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I582.71
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I691.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I362.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I467.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I788.81
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I888.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7128.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2110.01
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6136.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1133.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1194.20
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3145.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5257.44
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.55
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.71
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A638.62
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A346.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H291.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9112.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D187.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D293.60
GP2+ M cell, pool1.CNhs13228.11845-124H990.73
GP2+ M cell, pool2.CNhs13231.11846-124I1124.06
GP2+ M cell, pool3.CNhs13240.11847-124I299.12
Ileum epithelium, pool1.CNhs13199.10252-104B986.08
Ileum epithelium, pool2.CNhs13232.10253-104C195.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8113.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3150.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6158.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E979.24
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F593.01
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6120.35
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F797.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G862.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H189.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H363.87
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G961.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H268.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H459.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D893.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9100.77
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B389.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B775.89
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C284.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B873.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C394.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C494.49
Mouse Astrocytes, donor3.CNhs12107.11633-122C4110.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A237.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I950.05
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A143.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1171.85
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1117.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5157.80
Mouse Granule cells, donor1.CNhs12131.11713-123C353.21
Mouse Granule cells, donor2.CNhs12357.11731-123E357.13
Mouse Granule cells, donor3.CNhs12108.11636-122C762.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C687.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D187.15
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C771.09
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E766.25
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D261.81
Mouse Microglia, donor1.CNhs12629.11718-123C865.91
Mouse Microglia, donor2.CNhs12634.11736-123E839.57
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D553.92
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F549.82
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D953.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F179.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D575.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D255.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F252.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.94
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3106.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F389.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7107.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D451.70
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F448.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D844.80
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4112.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5105.24
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6100.69
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D672.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F670.05
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E167.85
Mouse Schwann, donor1.CNhs12507.11728-123D9156.00
Mouse Schwann, donor2.CNhs12573.11746-123F9105.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G367.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7139.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C4367.86
Mouse hepatocyte, donor3.CNhs12615.11637-122C8190.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F4174.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F6200.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7127.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I795.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3109.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8122.26
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G664.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H155.18
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I863.70
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1258.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2252.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3247.71
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6118.18
accessory axillary lymph node, adult.CNhs10475.1063-29H950.75
adrenal gland, adult.CNhs10508.49-24D7103.02
adrenal gland, embryo E14.CNhs11038.406-44C593.16
adrenal gland, embryo E16.CNhs11004.1254-43D684.03
adrenal gland, embryo E17.CNhs11043.1263-45I195.71
adrenal gland, embryo E18.CNhs11026.1262-18F5107.62
adrenal gland, neonate N00.CNhs11191.1311-23C197.13
adrenal gland, neonate N25.CNhs11223.1377-27I391.74
amnion, adult pregnant day17.5.CNhs10488.583-22A8417.27
aorta, adult.CNhs10498.46-23H186.76
bone (os femoris), adult.CNhs10483.56-12G2137.11
bone (os femoris), neonate N02.CNhs11227.1985-43F5103.53
bone (os femoris), neonate N16.CNhs11225.1525-43A6101.81
bone (os femoris), neonate N20.CNhs11195.1350-25C397.94
cecum, adult.CNhs10467.37-13H439.14
cerebellum, adult.CNhs10494.15-8B260.90
cerebellum, neonate N30.CNhs11135.1395-42I246.92
colon, adult.CNhs10468.36-18H789.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7116.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1156.57
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4114.87
corpora quadrigemina, adult.CNhs10501.16-22A485.23
corpus striatum, adult.CNhs10487.19-21D872.29
corpus striatum, neonate N00.CNhs11226.630-43F128.40
cortex, adult.CNhs10473.12-14D573.88
cortex, neonate N30.CNhs11107.1392-42F269.30
diencephalon, adult.CNhs10482.20-12F286.44
diencephalon, neonate N30.CNhs11201.1388-42B266.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B189.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A276.39
epididymis, adult.CNhs10490.58-23B299.32
eyeball, adult.CNhs10484.31-12G4133.21
eyeball, embryo E12.CNhs11016.345-16C687.83
eyeball, embryo E14.CNhs10521.399-16E290.12
eyeball, embryo E15.CNhs10593.426-16C992.55
eyeball, embryo E17.CNhs11023.1261-18D475.65
eyeball, neonate N00.CNhs11207.633-15C668.78
eyeball, neonate N01.CNhs11140.1532-43E758.68
eyeball, neonate N02.CNhs11205.1551-44G864.09
eyeball, neonate N16.CNhs11188.777-19A272.70
forelimb, embryo E11.CNhs10596.335-25E289.25
forelimb, embryo E12.CNhs10600.359-14H283.40
forelimb, embryo E13.CNhs10589.384-1E275.83
forelimb, embryo E14.CNhs10577.413-26A8103.24
forelimb, embryo E15.CNhs11007.437-20E776.46
forelimb, embryo E17.CNhs10598.1517-43C487.76
forelimb, embryo E18.CNhs11008.1520-43B583.34
gonad, embryo E13.CNhs11044.1564-45I678.82
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8146.76
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2148.23
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5119.35
heart, embryo E11.CNhs10586.331-24E999.01
heart, embryo E12.CNhs11015.353-12F599.91
heart, embryo E13.CNhs11013.376-3I994.53
heart, embryo E14.CNhs10597.403-26D480.73
heart, embryo E15.CNhs11017.431-16C891.89
heart, embryo E16.CNhs11021.457-17C683.77
heart, embryo E17.CNhs11025.479-18E589.53
heart, embryo E18.CNhs11030.1283-20G372.97
heart, neonate N00.CNhs11213.639-21E394.46
heart, neonate N03.CNhs11221.1349-25I287.05
heart, neonate N10.CNhs11118.749-24G187.83
heart, neonate N16.CNhs11209.782-15G196.80
heart, neonate N20.CNhs11127.821-26I698.54
heart, neonate N25.CNhs11196.1351-25D3103.41
heart, neonate N30.CNhs11202.1390-42D2112.33
hippocampus, adult.CNhs10478.13-16E873.39
hippocampus, neonate N00.CNhs11228.627-43G143.53
intestinal mucosa, adult.CNhs10506.860-29I3109.37
intestine, adult.CNhs10496.178-9A3114.51
intestine, embryo E12.CNhs11019.1251-16I591.93
intestine, embryo E13.CNhs11010.381-16D586.39
intestine, embryo E15.CNhs10602.976-16D886.86
intestine, embryo E16.CNhs10585.463-22H481.88
intestine, embryo E17.CNhs10582.482-18D375.39
intestine, embryo E18.CNhs10526.1289-20F781.42
intestine, neonate N00.CNhs11126.644-26D180.20
intestine, neonate N01.CNhs11192.1322-23E983.34
intestine, neonate N06.CNhs11102.688-20B872.38
intestine, neonate N07.CNhs11095.720-20F268.24
intestine, neonate N10.CNhs11098.755-23A572.92
intestine, neonate N20.CNhs11187.827-18D187.19
intestine, neonate N25.CNhs11121.1352-25E391.43
intestine, neonate N30.CNhs11131.1384-42G187.42
kidney, embryo E14.CNhs10606.411-4I993.13
kidney, embryo E15.CNhs10997.434-16F875.06
kidney, embryo E16.CNhs10584.464-22A569.88
kidney, embryo E17.CNhs11028.483-18I272.30
kidney, embryo E18.CNhs11001.1288-20C766.53
kidney, neonate N00.CNhs11214.646-21G765.02
kidney, neonate N10.CNhs11206.758-6D557.17
kidney, neonate N20.CNhs11113.832-19I169.23
kidney, neonate N25.CNhs11122.1353-25F370.18
kidney, neonate N30.CNhs11203.1385-42H173.79
liver, adult pregnant day01.CNhs10466.508-5B2178.76
liver, embryo E12.CNhs10601.355-15F8175.02
liver, embryo E13.CNhs10524.378-3H6173.76
liver, embryo E14.CNhs10594.409-16E1168.20
liver, embryo E15.CNhs10520.433-16D7186.63
liver, embryo E16.CNhs10523.462-17F5172.20
liver, embryo E17.CNhs10510.481-18A3167.80
liver, embryo E18.CNhs10579.499-43G4157.37
liver, neonate N00.CNhs11117.641-24F4122.57
liver, neonate N03.CNhs11123.1345-25G2130.69
liver, neonate N06.CNhs11101.684-20A870.45
liver, neonate N07.CNhs11103.716-20H2116.48
liver, neonate N10.CNhs11115.751-24B9112.96
liver, neonate N20.CNhs11220.823-25A3145.74
liver, neonate N25.CNhs11198.1368-26H1172.04
liver, neonate N30.CNhs11106.1382-42D1170.30
lung, adult.CNhs10474.28-22B167.25
lung, embryo E12.CNhs10522.354-16G298.35
lung, embryo E14.CNhs10604.404-26F887.84
lung, embryo E15.CNhs11020.432-17C575.54
lung, embryo E16.CNhs10998.458-17B671.82
lung, embryo E17.CNhs10605.480-44A660.13
lung, embryo E18.CNhs10583.1287-20I653.80
lung, neonate N00.CNhs11224.640-42C659.52
lung, neonate N06.CNhs11212.683-20E550.92
lung, neonate N07.CNhs11111.715-19A347.17
lung, neonate N10.CNhs11219.750-23E642.26
lung, neonate N20.CNhs11109.822-18A443.59
lung, neonate N25.CNhs11119.1359-25C749.04
lung, neonate N30.CNhs11133.1394-42H247.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A179.92
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1120.20
mammary gland, adult lactating day02.CNhs10480.595-22B696.88
mammary gland, adult pregnant day19.CNhs10476.588-5H284.99
medulla oblongata, adult.CNhs10477.17-12C283.17
medulla oblongata, neonate N30.CNhs11200.1396-42A391.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7105.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2120.43
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1124.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2125.33
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E394.57
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D798.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D887.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D980.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4110.11
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5101.71
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6103.57
olfactory brain, adult.CNhs10489.18-22I959.44
ovary, adult.CNhs10507.91-2I794.11
ovary, embryo E18.CNhs11040.505-44H760.72
ovary, neonate N00.CNhs11217.1299-22I477.70
oviduct, adult pregnant day01.CNhs10500.988-6G658.56
pancreas, adult.CNhs10486.34-16E4108.85
pancreas, embryo E14.CNhs11012.405-44F485.46
pancreas, embryo E15.CNhs11042.1556-45F299.77
pancreas, embryo E16.CNhs11003.460-26E5143.34
pancreas, embryo E17.CNhs10599.1558-45G3108.08
pancreas, embryo E18.CNhs10580.1535-43I7133.43
pancreas, neonate N00.CNhs11105.645-26G9104.41
pancreas, neonate N01.CNhs11138.1531-43D789.79
pancreas, neonate N02.CNhs11139.1539-43D899.46
pancreas, neonate N16.CNhs11136.787-43B6122.62
pancreas, neonate N25.CNhs11094.1555-45E2158.13
pancreas, neonate N30.CNhs11182.1548-44H5144.39
pituitary gland, adult.CNhs10493.21-1G8100.43
pituitary gland, embryo E12.CNhs11018.346-16E670.94
pituitary gland, embryo E13.CNhs11009.370-44C753.94
pituitary gland, embryo E14.CNhs11037.398-44A570.73
pituitary gland, embryo E15.CNhs10592.427-16B975.72
pituitary gland, embryo E16.CNhs11036.449-43F655.65
pituitary gland, embryo E17.CNhs11039.1265-44F574.54
pituitary gland, neonate N00.CNhs11190.1308-22E957.24
placenta, adult pregnant day10.CNhs10472.539-13I7106.31
placenta, adult pregnant day17.CNhs10464.577-18G3151.25
prostate, adult.CNhs10470.859-1F8201.78
skin, adult.CNhs10492.30-1C385.91
skin, neonate N00.CNhs11124.650-25G479.92
skin, neonate N03.CNhs11215.662-22H381.00
skin, neonate N06.CNhs11097.693-20I567.21
skin, neonate N10.CNhs11108.762-6C480.76
small intestine, neonate N16.CNhs11114.790-21I182.49
spinal cord, adult.CNhs10505.24-13C981.59
spleen, adult.CNhs10465.25-2G2116.36
spleen, embryo E16.CNhs11035.461-43C174.30
spleen, embryo E18.CNhs11011.1271-21F2104.26
spleen, neonate N10.CNhs11116.752-24D1142.97
spleen, neonate N20.CNhs11112.824-19H1142.44
spleen, neonate N25.CNhs11099.1354-25G3120.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6143.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9143.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3137.09
stomach, adult.CNhs10503.33-1H697.38
stomach, embryo E12.CNhs10588.356-43E386.99
stomach, embryo E15.CNhs10603.1252-16G889.46
stomach, embryo E16.CNhs11022.459-17D474.96
stomach, embryo E17.CNhs11006.1035-18D573.81
stomach, embryo E18.CNhs10999.1286-20C688.22
stomach, neonate N03.CNhs11193.1340-24B887.26
stomach, neonate N07.CNhs11210.718-18A979.76
stomach, neonate N25.CNhs11104.1355-25E486.90
stomach, neonate N30.CNhs11134.1386-42I159.36
submandibular gland, adult.CNhs10469.59-29C187.61
testis, adult.CNhs10504.57-7G524.80
testis, embryo E13.CNhs11031.389-23F574.01
testis, embryo E15.CNhs11034.443-27C574.46
testis, embryo E16.CNhs11033.470-26G585.75
testis, embryo E17.CNhs11029.486-18I572.72
testis, embryo E18.CNhs11027.503-18G579.75
testis, neonate N00.CNhs11189.1300-22B775.81
testis, neonate N07.CNhs11222.726-26I471.22
testis, neonate N10.CNhs11204.763-44D953.16
testis, neonate N20.CNhs11110.839-18H333.10
testis, neonate N30.CNhs11130.1391-42E234.28
thymus, adult.CNhs10471.38-12B542.66
thymus, embryo E14.CNhs11041.402-44I487.98
thymus, embryo E15.CNhs11005.430-45I277.14
thymus, embryo E16.CNhs11002.456-26C578.47
thymus, embryo E17.CNhs10581.478-18C175.37
thymus, embryo E18.CNhs10595.1273-19G464.17
thymus, neonate N02.CNhs11181.1541-43F847.84
thymus, neonate N03.CNhs11137.2104-43C753.91
thymus, neonate N06.CNhs11197.681-26C442.81
thymus, neonate N07.CNhs11211.713-19D348.77
thymus, neonate N10.CNhs11194.748-24E444.77
thymus, neonate N20.CNhs11186.820-7A248.05
thymus, neonate N25.CNhs11125.1362-25G741.37
thymus, neonate N30.CNhs11132.1393-42G231.44
tongue, adult.CNhs10499.32-1B4116.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3161.38
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7179.34
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5196.26
urinary bladder, adult.CNhs10481.879-12E469.93
uterus, adult pregnant day19.CNhs10497.590-15F599.85
uterus, adult.CNhs10509.92-27E560.26
vagina, adult.CNhs10502.89-27D570.74
vesicular gland, adult.CNhs10491.51-27F899.81
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A183.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A279.18
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A379.63
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D773.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A473.30
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A683.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A795.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8104.68
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A989.57
whole body, embryo E11.CNhs11014.324-5I8105.45
whole body, embryo E12.CNhs10587.857-27C995.77
whole body, embryo E13.CNhs10512.372-23H294.07
whole body, embryo E14.5.CNhs10578.420-27D2103.32
whole body, embryo E14.CNhs10519.395-14B1124.93
whole body, embryo E16.CNhs10514.453-14F297.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G580.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G573.97
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G585.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G581.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G574.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G580.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G572.29
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G575.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G575.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G582.88
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G574.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G581.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G570.05
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G594.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G583.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G583.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G574.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G587.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G586.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G578.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G581.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G585.50
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G573.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G589.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G587.67
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G578.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G596.99
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G588.31
whole body, embryo E17.5.CNhs10513.490-9F983.14
whole body, embryo E17.CNhs10517.475-3I554.21
whole body, embryo E18.CNhs10516.493-3B381.64
whole body, neonate N00.CNhs10525.657-19C284.66
whole body, neonate N01.CNhs10576.659-23C681.11
whole body, neonate N06.CNhs10515.692-21D189.34
whole body, neonate N10.CNhs10518.761-6B4108.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube2.92e-1047
liver4.82e-1022
epithelial sac4.82e-1022
digestive gland4.82e-1022
epithelium of foregut-midgut junction4.82e-1022
anatomical boundary4.82e-1022
hepatobiliary system4.82e-1022
foregut-midgut junction4.82e-1022
hepatic diverticulum4.82e-1022
liver primordium4.82e-1022
septum transversum4.82e-1022
liver bud4.82e-1022
exocrine gland1.76e-0925
exocrine system1.76e-0925
trunk mesenchyme2.88e-0945
digestive tract diverticulum8.46e-0923
sac8.46e-0923
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