FFCP PHASE1:Mm9::chr1:74081898..74081926,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3277 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:74081898..74081926,- | |||
|description=CAGE_peak_at_chr1:74081898..74081926,- | |description=CAGE_peak_at_chr1:74081898..74081926,- | ||
|id=chr1:74081898..74081926,- | |id=chr1:74081898..74081926,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,3.93e-19,3;CL:0000737,3.93e-19,3;CL:0000746,3.93e-19,3;CL:0000513,3.93e-19,3;CL:0000680,7.51e-10,6;CL:0000187,7.51e-10,6;CL:0000056,7.51e-10,6;CL:0000222,1.63e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!7.52e-10!14;UBERON:0000117!7.52e-10!14;UBERON:0000171!7.52e-10!14;UBERON:0000170!7.52e-10!14;UBERON:0005597!7.52e-10!14;UBERON:0000118!7.52e-10!14;UBERON:0005153!2.77e-09!17;UBERON:0005178!1.55e-07!17;UBERON:0005181!1.55e-07!17;UBERON:0002224!1.55e-07!17;UBERON:0000915!1.55e-07!17;UBERON:0008947!1.55e-07!17;UBERON:0003258!1.55e-07!17;UBERON:0005157!4.29e-07!27 | |ontology_enrichment_uberon=UBERON:0002048!7.52e-10!14;UBERON:0000117!7.52e-10!14;UBERON:0000171!7.52e-10!14;UBERON:0000170!7.52e-10!14;UBERON:0005597!7.52e-10!14;UBERON:0000118!7.52e-10!14;UBERON:0005153!2.77e-09!17;UBERON:0005178!1.55e-07!17;UBERON:0005181!1.55e-07!17;UBERON:0002224!1.55e-07!17;UBERON:0000915!1.55e-07!17;UBERON:0008947!1.55e-07!17;UBERON:0003258!1.55e-07!17;UBERON:0005157!4.29e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010147,1.25e-12,2;UBERON:0003937,1.25e-12,2;UBERON:0005399,1.25e-12,2;UBERON:0000162,2.85e-09,3;UBERON:0001353,2.85e-09,3;UBERON:0000163,2.85e-09,3;UBERON:0006866,2.85e-09,3;UBERON:0001046,2.85e-09,3;UBERON:0000164,2.85e-09,3;UBERON:0000931,2.85e-09,3;UBERON:0005153,1.37e-08,17;UBERON:0007023,2.71e-08,51;UBERON:0001255,1.20e-07,1;UBERON:0001556,1.20e-07,1;UBERON:0002367,1.83e-07,1;UBERON:0009846,1.83e-07,1;UBERON:0003353,1.83e-07,1;UBERON:0004902,1.83e-07,1;UBERON:0003820,1.83e-07,1;UBERON:0009847,1.83e-07,1;UBERON:0005157,2.76e-07,20;UBERON:0000993,4.21e-07,1;UBERON:0006834,5.53e-07,1;UBERON:0002048,7.09e-07,14;UBERON:0000117,7.09e-07,14;UBERON:0000171,7.09e-07,14;UBERON:0000170,7.09e-07,14;UBERON:0005597,7.09e-07,14;UBERON:0000118,7.09e-07,14;UBERON:0000998,8.26e-07,1;UBERON:0007194,8.26e-07,1;UBERON:0006868,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,0,0,0,0.194429899074283,0,0,0,0,0,1.54355661621568,3.72493471920384,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,1.87979163995885,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,1.37250180845588,0,0,0,0,0.486723789203273,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.885660887877613,0.784993639206874,0.863780147452604,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0.505157755894224,0,0.482443521363367,1.10851914099963,0,0,0,0.469380496577004,0.670025029767263,0.952174563544055,1.17080188714679,0.945810864637146,0.44292937929755,0.637819074629948,1.14704320301017,0.690739927463582,1.44649058581512,0,0,0,0,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,1.15479086080775,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,1.98475558249466,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.247960367176008,0.523511883968059,0.518459893167171,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,5.60249822693352,1.12609485270709,0.73260649706906,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,0,0,0,0.194429899074283,0,0,0,0,0,1.54355661621568,3.72493471920384,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,1.87979163995885,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,1.37250180845588,0,0,0,0,0.486723789203273,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.885660887877613,0.784993639206874,0.863780147452604,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0.505157755894224,0,0.482443521363367,1.10851914099963,0,0,0,0.469380496577004,0.670025029767263,0.952174563544055,1.17080188714679,0.945810864637146,0.44292937929755,0.637819074629948,1.14704320301017,0.690739927463582,1.44649058581512,0,0,0,0,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,1.15479086080775,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,1.98475558249466,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.247960367176008,0.523511883968059,0.518459893167171,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,5.60249822693352,1.12609485270709,0.73260649706906,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr1:74081898..74081926,- | |short_description=p@chr1:74081898..74081926,- | ||
}} | }} |
Latest revision as of 23:40, 5 August 2015
Short description: | p@chr1:74081898..74081926, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:74081898..74081926, - |
Coexpression cluster: | MCL_coexpression_mm9:3277 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 3.93e-19 | 3 |
striated muscle cell | 3.93e-19 | 3 |
cardiac muscle cell | 3.93e-19 | 3 |
cardiac muscle myoblast | 3.93e-19 | 3 |
muscle precursor cell | 7.51e-10 | 6 |
muscle cell | 7.51e-10 | 6 |
myoblast | 7.51e-10 | 6 |
mesodermal cell | 1.63e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
male accessory sex gland | 1.25e-12 | 2 |
sex gland | 1.25e-12 | 2 |
male reproductive gland | 1.25e-12 | 2 |
cloaca | 2.85e-09 | 3 |
anal region | 2.85e-09 | 3 |
embryonic cloaca | 2.85e-09 | 3 |
terminal part of digestive tract | 2.85e-09 | 3 |
hindgut | 2.85e-09 | 3 |
primitive urogenital sinus | 2.85e-09 | 3 |
proctodeum | 2.85e-09 | 3 |
epithelial bud | 1.37e-08 | 17 |
adult organism | 2.71e-08 | 51 |
urinary bladder | 1.20e-07 | 1 |
lower urinary tract | 1.20e-07 | 1 |
prostate gland | 1.83e-07 | 1 |
embryonic cloacal epithelium | 1.83e-07 | 1 |
epithelium of hindgut | 1.83e-07 | 1 |
urogenital sinus epithelium | 1.83e-07 | 1 |
prostate bud | 1.83e-07 | 1 |
prostate field | 1.83e-07 | 1 |
epithelial fold | 2.76e-07 | 20 |
oviduct | 4.21e-07 | 1 |
uterus or analog | 5.53e-07 | 1 |
lung | 7.09e-07 | 14 |
respiratory tube | 7.09e-07 | 14 |
respiration organ | 7.09e-07 | 14 |
pair of lungs | 7.09e-07 | 14 |
lung primordium | 7.09e-07 | 14 |
lung bud | 7.09e-07 | 14 |
seminal vesicle | 8.26e-07 | 1 |
vesicular gland | 8.26e-07 | 1 |
seminal fluid secreting gland | 8.26e-07 | 1 |