FFCP PHASE1:Mm9::chr1:72898643..72898650,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=336|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72898643..72898650,+|id=chr1:72898643..72898650,+|ontology_enrichment_celltype=CL:0002453!3.66e-20!8;CL:0000333!8.26e-16!10;CL:0000095!8.26e-16!10;CL:0000243!8.26e-16!10;CL:0000123!8.26e-16!10;CL:0000125!8.26e-16!10;CL:0000030!8.26e-16!10;CL:0000339!8.26e-16!10;CL:0000128!1.21e-15!6;CL:0000126!1.21e-15!6;CL:0000127!1.21e-15!6;CL:0002319!9.02e-11!43;CL:0000221!1.93e-10!44;CL:0000133!1.93e-10!44;CL:0000055!9.72e-09!50;CL:0002612!1.12e-07!3;CL:0002321!4.68e-07!70;CL:0000220!4.68e-07!70|ontology_enrichment_celltype_v019_2=CL:0002453,1.81e-45,8;CL:0000128,3.01e-39,6;CL:0000126,3.01e-39,6;CL:0000127,3.01e-39,6;CL:0000333,1.59e-36,10;CL:0000095,1.59e-36,10;CL:0000243,1.59e-36,10;CL:0000123,1.59e-36,10;CL:0000125,1.59e-36,10;CL:0000030,1.59e-36,10;CL:0000339,1.59e-36,10;CL:0002605,3.41e-30,2;CL:0002604,3.41e-30,2;CL:0002319,6.89e-09,43;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0002603,1.81e-08,2;CL:0000878,2.13e-08,2;CL:0000129,2.13e-08,2;CL:0000219,3.79e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001948!1.08e-11!5;UBERON:0002315!1.08e-11!5;UBERON:0002240!1.11e-09!6;UBERON:0005174!1.11e-09!6;UBERON:0001137!1.11e-09!6;UBERON:0003076!4.97e-09!12;UBERON:0003057!4.97e-09!12;UBERON:0002257!1.12e-07!3;UBERON:0001017!2.22e-07!73;UBERON:0005743!2.22e-07!73;UBERON:0000073!4.54e-07!75;UBERON:0001016!4.54e-07!75;UBERON:0004121!9.12e-07!102;UBERON:0000924!9.12e-07!102;UBERON:0006601!9.12e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.15e-09,7;UBERON:0003022,2.15e-09,7;UBERON:0002421,2.15e-09,7;UBERON:0000349,2.15e-09,7;UBERON:0002600,2.15e-09,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.2703773457067,3.73466510648602,10.8880743481599,0.699932108126813,5.75010257459886,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0.599200221036809,1.15265491596466,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,4.31304619582064,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:72898643..72898650,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=336 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:72898643..72898650,+ | |||
|description=CAGE_peak_at_chr1:72898643..72898650,+ | |||
|id=chr1:72898643..72898650,+ | |||
|ontology_enrichment_celltype=CL:0002453!3.66e-20!8;CL:0000333!8.26e-16!10;CL:0000095!8.26e-16!10;CL:0000243!8.26e-16!10;CL:0000123!8.26e-16!10;CL:0000125!8.26e-16!10;CL:0000030!8.26e-16!10;CL:0000339!8.26e-16!10;CL:0000128!1.21e-15!6;CL:0000126!1.21e-15!6;CL:0000127!1.21e-15!6;CL:0002319!9.02e-11!43;CL:0000221!1.93e-10!44;CL:0000133!1.93e-10!44;CL:0000055!9.72e-09!50;CL:0002612!1.12e-07!3;CL:0002321!4.68e-07!70;CL:0000220!4.68e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.81e-45,8;CL:0000128,3.01e-39,6;CL:0000126,3.01e-39,6;CL:0000127,3.01e-39,6;CL:0000333,1.59e-36,10;CL:0000095,1.59e-36,10;CL:0000243,1.59e-36,10;CL:0000123,1.59e-36,10;CL:0000125,1.59e-36,10;CL:0000030,1.59e-36,10;CL:0000339,1.59e-36,10;CL:0002605,3.41e-30,2;CL:0002604,3.41e-30,2;CL:0002319,6.89e-09,43;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0002603,1.81e-08,2;CL:0000878,2.13e-08,2;CL:0000129,2.13e-08,2;CL:0000219,3.79e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!1.08e-11!5;UBERON:0002315!1.08e-11!5;UBERON:0002240!1.11e-09!6;UBERON:0005174!1.11e-09!6;UBERON:0001137!1.11e-09!6;UBERON:0003076!4.97e-09!12;UBERON:0003057!4.97e-09!12;UBERON:0002257!1.12e-07!3;UBERON:0001017!2.22e-07!73;UBERON:0005743!2.22e-07!73;UBERON:0000073!4.54e-07!75;UBERON:0001016!4.54e-07!75;UBERON:0004121!9.12e-07!102;UBERON:0000924!9.12e-07!102;UBERON:0006601!9.12e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.15e-09,7;UBERON:0003022,2.15e-09,7;UBERON:0002421,2.15e-09,7;UBERON:0000349,2.15e-09,7;UBERON:0002600,2.15e-09,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.2703773457067,3.73466510648602,10.8880743481599,0.699932108126813,5.75010257459886,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0.599200221036809,1.15265491596466,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,4.31304619582064,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:72898643..72898650,+ | |||
}} |
Latest revision as of 23:19, 5 August 2015
Short description: | p@chr1:72898643..72898650, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72898643..72898650, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.81e-45 | 8 |
oligodendrocyte | 3.01e-39 | 6 |
macroglial cell | 3.01e-39 | 6 |
astrocyte | 3.01e-39 | 6 |
migratory neural crest cell | 1.59e-36 | 10 |
neuron associated cell | 1.59e-36 | 10 |
glial cell (sensu Vertebrata) | 1.59e-36 | 10 |
neuron associated cell (sensu Vertebrata) | 1.59e-36 | 10 |
glial cell | 1.59e-36 | 10 |
glioblast | 1.59e-36 | 10 |
glioblast (sensu Vertebrata) | 1.59e-36 | 10 |
astrocyte of the cerebral cortex | 3.41e-30 | 2 |
astrocyte of the hippocampus | 3.41e-30 | 2 |
neural cell | 6.89e-09 | 43 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
astrocyte of the cerebellum | 1.81e-08 | 2 |
central nervous system macrophage | 2.13e-08 | 2 |
microglial cell | 2.13e-08 | 2 |
motile cell | 3.79e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.15e-09 | 7 |
lobe parts of cerebral cortex | 2.15e-09 | 7 |
hippocampal formation | 2.15e-09 | 7 |
limbic system | 2.15e-09 | 7 |
limbic lobe | 2.15e-09 | 7 |