FFCP PHASE1:Mm9::chr1:72895774..72895788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=336 | |MCL_coexpression_id=336 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72895774..72895788,+ | |||
|description=CAGE_peak_at_chr1:72895774..72895788,+ | |description=CAGE_peak_at_chr1:72895774..72895788,+ | ||
|id=chr1:72895774..72895788,+ | |id=chr1:72895774..72895788,+ | ||
|ontology_enrichment_celltype=CL:0002453!3.79e-16!8;CL:0000128!1.33e-12!6;CL:0000126!1.33e-12!6;CL:0000127!1.33e-12!6;CL:0000333!1.50e-12!10;CL:0000095!1.50e-12!10;CL:0000243!1.50e-12!10;CL:0000123!1.50e-12!10;CL:0000125!1.50e-12!10;CL:0000030!1.50e-12!10;CL:0000339!1.50e-12!10;CL:0002319!3.10e-12!43;CL:0000221!7.72e-12!44;CL:0000133!7.72e-12!44;CL:0000055!3.95e-11!50;CL:0002321!2.12e-07!70;CL:0000220!2.12e-07!70 | |ontology_enrichment_celltype=CL:0002453!3.79e-16!8;CL:0000128!1.33e-12!6;CL:0000126!1.33e-12!6;CL:0000127!1.33e-12!6;CL:0000333!1.50e-12!10;CL:0000095!1.50e-12!10;CL:0000243!1.50e-12!10;CL:0000123!1.50e-12!10;CL:0000125!1.50e-12!10;CL:0000030!1.50e-12!10;CL:0000339!1.50e-12!10;CL:0002319!3.10e-12!43;CL:0000221!7.72e-12!44;CL:0000133!7.72e-12!44;CL:0000055!3.95e-11!50;CL:0002321!2.12e-07!70;CL:0000220!2.12e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,8.46e-44,8;CL:0000128,8.77e-41,6;CL:0000126,8.77e-41,6;CL:0000127,8.77e-41,6;CL:0000333,4.33e-35,10;CL:0000095,4.33e-35,10;CL:0000243,4.33e-35,10;CL:0000123,4.33e-35,10;CL:0000125,4.33e-35,10;CL:0000030,4.33e-35,10;CL:0000339,4.33e-35,10;CL:0002605,5.12e-21,2;CL:0002604,5.12e-21,2;CL:0002603,2.00e-20,2;CL:0000219,1.11e-08,54;CL:0002319,3.53e-08,43;CL:0000221,5.44e-08,44;CL:0000133,5.44e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.41e-11!73;UBERON:0005743!4.41e-11!73;UBERON:0000073!1.32e-10!75;UBERON:0001016!1.32e-10!75;UBERON:0004121!6.35e-10!102;UBERON:0000924!6.35e-10!102;UBERON:0006601!6.35e-10!102;UBERON:0004111!6.24e-09!122;UBERON:0001049!1.50e-08!52;UBERON:0005068!1.50e-08!52;UBERON:0006241!1.50e-08!52;UBERON:0007135!1.50e-08!52;UBERON:0000033!9.66e-08!63;UBERON:0000025!9.78e-08!114;UBERON:0002346!2.74e-07!71;UBERON:0003075!2.74e-07!71;UBERON:0007284!2.74e-07!71 | |ontology_enrichment_uberon=UBERON:0001017!4.41e-11!73;UBERON:0005743!4.41e-11!73;UBERON:0000073!1.32e-10!75;UBERON:0001016!1.32e-10!75;UBERON:0004121!6.35e-10!102;UBERON:0000924!6.35e-10!102;UBERON:0006601!6.35e-10!102;UBERON:0004111!6.24e-09!122;UBERON:0001049!1.50e-08!52;UBERON:0005068!1.50e-08!52;UBERON:0006241!1.50e-08!52;UBERON:0007135!1.50e-08!52;UBERON:0000033!9.66e-08!63;UBERON:0000025!9.78e-08!114;UBERON:0002346!2.74e-07!71;UBERON:0003075!2.74e-07!71;UBERON:0007284!2.74e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.01e-10,4;UBERON:0002680,1.01e-10,4;UBERON:0001895,1.01e-10,4;UBERON:0010092,1.01e-10,4;UBERON:0006215,1.01e-10,4;UBERON:0004733,1.89e-07,6;UBERON:0004732,1.89e-07,6;UBERON:0002028,1.89e-07,6;UBERON:0007277,1.89e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,5.23260375313072,5.4921545683618,15.3599620268684,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,1.92109152660777,0.207379224616955,0.270011876663381,0,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0,0,0.860423876981386,1.3599426674155,0,0,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,1.45921704097532,0.549122826376163,7.18841032636773,0.744281895337007,0.624075346229121,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,5.23260375313072,5.4921545683618,15.3599620268684,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,1.92109152660777,0.207379224616955,0.270011876663381,0,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0,0,0.860423876981386,1.3599426674155,0,0,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,1.45921704097532,0.549122826376163,7.18841032636773,0.744281895337007,0.624075346229121,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:72895774..72895788,+ | |short_description=p@chr1:72895774..72895788,+ | ||
}} | }} |
Latest revision as of 23:17, 5 August 2015
Short description: | p@chr1:72895774..72895788, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72895774..72895788, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 8.46e-44 | 8 |
oligodendrocyte | 8.77e-41 | 6 |
macroglial cell | 8.77e-41 | 6 |
astrocyte | 8.77e-41 | 6 |
migratory neural crest cell | 4.33e-35 | 10 |
neuron associated cell | 4.33e-35 | 10 |
glial cell (sensu Vertebrata) | 4.33e-35 | 10 |
neuron associated cell (sensu Vertebrata) | 4.33e-35 | 10 |
glial cell | 4.33e-35 | 10 |
glioblast | 4.33e-35 | 10 |
glioblast (sensu Vertebrata) | 4.33e-35 | 10 |
astrocyte of the cerebral cortex | 5.12e-21 | 2 |
astrocyte of the hippocampus | 5.12e-21 | 2 |
astrocyte of the cerebellum | 2.00e-20 | 2 |
motile cell | 1.11e-08 | 54 |
neural cell | 3.53e-08 | 43 |
ectodermal cell | 5.44e-08 | 44 |
neurectodermal cell | 5.44e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.01e-10 | 4 |
regional part of metencephalon | 1.01e-10 | 4 |
metencephalon | 1.01e-10 | 4 |
future metencephalon | 1.01e-10 | 4 |
rhombic lip | 1.01e-10 | 4 |
segmental subdivision of hindbrain | 1.89e-07 | 6 |
segmental subdivision of nervous system | 1.89e-07 | 6 |
hindbrain | 1.89e-07 | 6 |
presumptive hindbrain | 1.89e-07 | 6 |