Personal tools

FFCP PHASE1:Mm9::chr5:104523689..104523706,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:104523689..104523706,- |short_description=p@chr5:104523689..104523706,- |description=CAGE_peak_at_chr5:104523689..104523706,- |association_with_transcript=...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:104523689..104523706,-
|DHSsupport=NA
|short_description=p@chr5:104523689..104523706,-
|DPIdataset=NA
|description=CAGE_peak_at_chr5:104523689..104523706,-
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=138
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr5:104523689..104523706,-
|description=CAGE_peak_at_chr5:104523689..104523706,-
|id=chr5:104523689..104523706,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.12e-11!52;UBERON:0005068!3.12e-11!52;UBERON:0006241!3.12e-11!52;UBERON:0007135!3.12e-11!52;UBERON:0000955!1.65e-10!50;UBERON:0006238!1.65e-10!50;UBERON:0002616!4.51e-10!49;UBERON:0001017!1.45e-09!73;UBERON:0005743!1.45e-09!73;UBERON:0000025!4.59e-09!114;UBERON:0000073!8.78e-09!75;UBERON:0001016!8.78e-09!75;UBERON:0002346!1.03e-08!71;UBERON:0003075!1.03e-08!71;UBERON:0007284!1.03e-08!71;UBERON:0004111!1.37e-08!122;UBERON:0000468!1.68e-08!333;UBERON:0002020!1.92e-08!34;UBERON:0000033!3.36e-08!63;UBERON:0002021!8.20e-08!10;UBERON:0000411!8.20e-08!10;UBERON:0001950!8.20e-08!10;UBERON:0003080!1.40e-07!40;UBERON:0002780!3.79e-07!39;UBERON:0001890!3.79e-07!39;UBERON:0006240!3.79e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.18e-12,54;UBERON:0001049,2.31e-10,52;UBERON:0005068,2.31e-10,52;UBERON:0006241,2.31e-10,52;UBERON:0007135,2.31e-10,52;UBERON:0000025,7.21e-10,114;UBERON:0010314,1.78e-09,92;UBERON:0001017,2.88e-09,73;UBERON:0002021,3.28e-09,10;UBERON:0000411,3.28e-09,10;UBERON:0001950,3.28e-09,10;UBERON:0004111,6.99e-09,122;UBERON:0002020,1.32e-08,34;UBERON:0001016,1.34e-08,75;UBERON:0002346,5.93e-08,64;UBERON:0003075,5.93e-08,64;UBERON:0007284,5.93e-08,64;UBERON:0000955,9.74e-08,47;UBERON:0006238,9.74e-08,47;UBERON:0002616,2.71e-07,46;UBERON:0002048,9.78e-07,14;UBERON:0000117,9.78e-07,14;UBERON:0000171,9.78e-07,14;UBERON:0000170,9.78e-07,14;UBERON:0005597,9.78e-07,14;UBERON:0000118,9.78e-07,14
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.699932108126813,1.43752564364972,0,0,0,2.31533492432352,2.57880095944881,0.515672092277442,0,1.5869729378161,1.26766280701236,0,0,0,0,0,0,1.92109152660777,1.14058573539325,0.810035629990144,0.420649922702764,9.71213346972932,9.05561017901615,0.367472397644862,0.0958454710182364,0,18.7196997698961,37.6677647351304,44.0850750445419,0,0.548925861614458,0.52091337055676,23.1721889171146,15.1945904708554,39.7275444219706,35.9446874277875,24.7726724590439,2.23679334990361,0.075726193333184,0,0,0,0,0,0,0,0.983110940922263,0.511290967734173,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.346970653532272,1.82679286987285,0.922461989024234,2.11011696773672,1.64624189989987,0.376999773989026,0.247194967734374,0.578397427679647,0.884610551949874,1.29413479957927,1.10420759230197,0.484875253135222,1.86391761218122,6.44117753425404,6.49284791121711,1.53274233125155,0,0,0,8.68785708547972,7.32000964509802,1.7591609295801,6.08385120672968,15.3429274398198,12.8828587626927,12.4925772562173,6.82323737797119,0.746441823660558,0.252722758433675,0.210441855886474,0.390361328888111,0,0,1.9591626318643,0.340182495756639,1.2811372028485,0.468508622798644,2.32833033665114,0,0.378212160335639,0,0.43839146485515,1.11218899690239,0.696504333044333,1.4404749548556,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0.23674473558521,1.37734962223183,2.62254091908543,5.34828072925938,3.21928081679543,3.03589890154641,3.12663714835613,9.68588038066662,2.67527071501324,2.04679982395465,3.51280184465681,3.48936688776967,5.25724871410318,2.16099685996497,0,0.528901133327089,1.91959425481711,3.0190767341857,0.644337306610467,1.00841762311671,1.11189021922435,0.760902504450237,3.32170343081158,2.30578536613615,3.2673577144035,1.79060824837036,2.53453313254856,0.898819408654221,6.26800344636613,1.59313018603494,0.189667900953082,1.02823661348756,0,1.62921062276251,2.52138233317913,1.05203729835478,1.07502113111237,0.738050739898011,1.09899109488962,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,7.18841032636773,0,0.312037673114561,0,0.358794827043824,0,1.66277871149944,0.189491411770485,1.79261474086228,4.92260748748046,4.92849521405854,3.01511263395268,3.80869825417622,8.78101415360095,3.31033802623001,8.858587585951,4.9430978283821,11.3065687153859,14.5055384767352,5.64131328467895,0,0,0,0,9.9541365792431,12.0728037189969,0,2.52470927204373,0.315508219416257,0,1.29254038639679,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,6.10510501201433,0.99358059645788,1.42452482933804,4.72372182125371,3.13443233647817,0,3.8844901784797,0.906970670894253,3.58349651536206,1.18120757152309,1.84461088766356,1.29214146584111,1.81766864738753,0.712994756769443,1.58018378967908,0,2.06271086496374,0.340439605753788,1.26042765821917,0.776152102696527,0.857348140126369,0.532020700926821,2.14042581122485,0.987294123612726,3.95804433848979,0.23467170806371,0.63549621259146,0.441056796109924,0.16488625294148,0.645857706783622,0.482503399425247,0.716234064018819,0.656563598980245,1.45740418314925,12.0526446306831,0.683483523191411,1.23832120777933,0.555583582109135,0.753473828018764,0.956859594047176,0.228778173206523,0,0,0,0,0.158167996790568,1.82987520414164,3.13215488383224,7.3180903605064,7.42432716737004,5.25970950900801,2.72756403893609,4.18809507174447,4.01806417204558,0,0,0.448549638131936,0.165458490457098,0.777804753376191,1.16243841129958,4.89972763923257,4.3422178298929,2.3436789271911,0.524296722128554,0.241584120826006,0.576060012515731,0,0.202725215290164,1.23253148597793,0.649604114888975,0.179026695667481,1.19208812868759,0.360586348559907,0.590758108698309,0.504832249740738,0.609654453239999,0.302478555410522,0.487289403698762,0.577271049841977,0.350630706544707,0.906921534460845,0,0,0,4.056981474676,2.62755465631655,2.19781949120718,0.857473516316263,0,20.3310663342144,15.1907328047368,24.0616115644547,10.1393377582776,13.0165678756422,18.1294535373528,14.8504950050997,18.0128481289688,13.5942722695261,22.7814537170801,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0,0,1.11123363900808,1.44224540067226,0.962757628775446,0.758091635291392,0.25347929989024,1.50901073108861,1.03005658216871,0.704276676453562,1.09127391015665,0,1.0429589335037,1.73618298417335,1.23625770240992,2.06078488188156,3.08582327146874,1.59728225543404,1.43061713968393,0.872078499793971,1.97629698872194,1.35383372626682,2.56099162021882,2.36762740294059,1.62964936615034,2.24456908663095,1.54225523561426,2.36410757701352,3.6830793885272,0.929621047115796,0,0.499621155875892,0.701794825336225,0.644613162144895,2.67803664896381,0.441182838239031,0.695603506861264
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.699932108126813,1.43752564364972,0,0,0,2.31533492432352,2.57880095944881,0.515672092277442,0,1.5869729378161,1.26766280701236,0,0,0,0,0,0,1.92109152660777,1.14058573539325,0.810035629990144,0.420649922702764,9.71213346972932,9.05561017901615,0.367472397644862,0.0958454710182364,0,18.7196997698961,37.6677647351304,44.0850750445419,0,0.548925861614458,0.52091337055676,23.1721889171146,15.1945904708554,39.7275444219706,35.9446874277875,24.7726724590439,2.23679334990361,0.075726193333184,0,0,0,0,0,0,0,0.983110940922263,0.511290967734173,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.346970653532272,1.82679286987285,0.922461989024234,2.11011696773672,1.64624189989987,0.376999773989026,0.247194967734374,0.578397427679647,0.884610551949874,1.29413479957927,1.10420759230197,0.484875253135222,1.86391761218122,6.44117753425404,6.49284791121711,1.53274233125155,0,0,0,8.68785708547972,7.32000964509802,1.7591609295801,6.08385120672968,15.3429274398198,12.8828587626927,12.4925772562173,6.82323737797119,0.746441823660558,0.252722758433675,0.210441855886474,0.390361328888111,0,0,1.9591626318643,0.340182495756639,1.2811372028485,0.468508622798644,2.32833033665114,0,0.378212160335639,0,0.43839146485515,1.11218899690239,0.696504333044333,1.4404749548556,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0.23674473558521,1.37734962223183,2.62254091908543,5.34828072925938,3.21928081679543,3.03589890154641,3.12663714835613,9.68588038066662,2.67527071501324,2.04679982395465,3.51280184465681,3.48936688776967,5.25724871410318,2.16099685996497,0,0.528901133327089,1.91959425481711,3.0190767341857,0.644337306610467,1.00841762311671,1.11189021922435,0.760902504450237,3.32170343081158,2.30578536613615,3.2673577144035,1.79060824837036,2.53453313254856,0.898819408654221,6.26800344636613,1.59313018603494,0.189667900953082,1.02823661348756,0,1.62921062276251,2.52138233317913,1.05203729835478,1.07502113111237,0.738050739898011,1.09899109488962,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,7.18841032636773,0,0.312037673114561,0,0.358794827043824,0,1.66277871149944,0.189491411770485,1.79261474086228,4.92260748748046,4.92849521405854,3.01511263395268,3.80869825417622,8.78101415360095,3.31033802623001,8.858587585951,4.9430978283821,11.3065687153859,14.5055384767352,5.64131328467895,0,0,0,0,9.9541365792431,12.0728037189969,0,2.52470927204373,0.315508219416257,0,1.29254038639679,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,6.10510501201433,0.99358059645788,1.42452482933804,4.72372182125371,3.13443233647817,0,3.8844901784797,0.906970670894253,3.58349651536206,1.18120757152309,1.84461088766356,1.29214146584111,1.81766864738753,0.712994756769443,1.58018378967908,0,2.06271086496374,0.340439605753788,1.26042765821917,0.776152102696527,0.857348140126369,0.532020700926821,2.14042581122485,0.987294123612726,3.95804433848979,0.23467170806371,0.63549621259146,0.441056796109924,0.16488625294148,0.645857706783622,0.482503399425247,0.716234064018819,0.656563598980245,1.45740418314925,12.0526446306831,0.683483523191411,1.23832120777933,0.555583582109135,0.753473828018764,0.956859594047176,0.228778173206523,0,0,0,0,0.158167996790568,1.82987520414164,3.13215488383224,7.3180903605064,7.42432716737004,5.25970950900801,2.72756403893609,4.18809507174447,4.01806417204558,0,0,0.448549638131936,0.165458490457098,0.777804753376191,1.16243841129958,4.89972763923257,4.3422178298929,2.3436789271911,0.524296722128554,0.241584120826006,0.576060012515731,0,0.202725215290164,1.23253148597793,0.649604114888975,0.179026695667481,1.19208812868759,0.360586348559907,0.590758108698309,0.504832249740738,0.609654453239999,0.302478555410522,0.487289403698762,0.577271049841977,0.350630706544707,0.906921534460845,0,0,0,4.056981474676,2.62755465631655,2.19781949120718,0.857473516316263,0,20.3310663342144,15.1907328047368,24.0616115644547,10.1393377582776,13.0165678756422,18.1294535373528,14.8504950050997,18.0128481289688,13.5942722695261,22.7814537170801,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0,0,1.11123363900808,1.44224540067226,0.962757628775446,0.758091635291392,0.25347929989024,1.50901073108861,1.03005658216871,0.704276676453562,1.09127391015665,0,1.0429589335037,1.73618298417335,1.23625770240992,2.06078488188156,3.08582327146874,1.59728225543404,1.43061713968393,0.872078499793971,1.97629698872194,1.35383372626682,2.56099162021882,2.36762740294059,1.62964936615034,2.24456908663095,1.54225523561426,2.36410757701352,3.6830793885272,0.929621047115796,0,0.499621155875892,0.701794825336225,0.644613162144895,2.67803664896381,0.441182838239031,0.695603506861264
|short_description=p@chr5:104523689..104523706,-
}}
}}

Latest revision as of 22:17, 5 August 2015

Short description:p@chr5:104523689..104523706, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:104523689..104523706, -
Coexpression cluster:MCL_coexpression_mm9:138
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr5:104523689..104523706-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D744.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.94
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.69
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B212.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A411.31
lung, neonate N25.CNhs11119.1359-25C714.51
lung, neonate N30.CNhs11133.1394-42H25.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.95
medulla oblongata, neonate N30.CNhs11200.1396-42A312.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D57.32
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.78
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.18e-1254
neural tube2.31e-1052
neural rod2.31e-1052
future spinal cord2.31e-1052
neural keel2.31e-1052
tube7.21e-10114
structure with developmental contribution from neural crest1.78e-0992
central nervous system2.88e-0973
occipital lobe3.28e-0910
visual cortex3.28e-0910
neocortex3.28e-0910
anatomical conduit6.99e-09122
gray matter1.32e-0834
nervous system1.34e-0875
neurectoderm5.93e-0864
neural plate5.93e-0864
presumptive neural plate5.93e-0864
brain9.74e-0847
future brain9.74e-0847
regional part of brain2.71e-0746
lung9.78e-0714
respiratory tube9.78e-0714
respiration organ9.78e-0714
pair of lungs9.78e-0714
lung primordium9.78e-0714
lung bud9.78e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:104523689..104523706,-&oldid=3947931"