FFCP PHASE1:Mm9::chr1:67247541..67247544,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=73|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:67247541..67247544,+|id=chr1:67247541..67247544,+|ontology_enrichment_celltype=CL:0000181!2.84e-14!5;CL:0000417!2.84e-14!5;CL:0000668!2.84e-14!5;CL:0000412!2.84e-14!5;CL:0000182!2.84e-14!5|ontology_enrichment_celltype_v019_2=CL:0000182,7.61e-32,5;CL:0000223,1.29e-08,20;CL:0000066,4.89e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.32e-25!22;UBERON:0007499!1.32e-25!22;UBERON:0006925!1.32e-25!22;UBERON:0009497!1.32e-25!22;UBERON:0000015!1.32e-25!22;UBERON:0002423!1.32e-25!22;UBERON:0006235!1.32e-25!22;UBERON:0008835!1.32e-25!22;UBERON:0003894!1.32e-25!22;UBERON:0004161!1.32e-25!22;UBERON:0008836!1.32e-25!22;UBERON:0009854!2.09e-24!23;UBERON:0009856!2.09e-24!23;UBERON:0002365!2.73e-22!25;UBERON:0002330!2.73e-22!25;UBERON:0003914!7.39e-13!47;UBERON:0005256!7.39e-13!47;UBERON:0003929!1.14e-10!55;UBERON:0005172!2.36e-10!49;UBERON:0005173!2.36e-10!49;UBERON:0002417!2.36e-10!49;UBERON:0000916!2.36e-10!49;UBERON:0000490!5.41e-10!66;UBERON:0005057!7.28e-10!51;UBERON:0002368!4.55e-08!60;UBERON:0005911!4.91e-08!69;UBERON:0004921!1.32e-07!126;UBERON:0004185!1.32e-07!126;UBERON:0001007!1.95e-07!128;UBERON:0001555!1.95e-07!128;UBERON:0007026!1.95e-07!128;UBERON:0002530!2.75e-07!65;UBERON:0004119!2.84e-07!130;UBERON:0000925!2.84e-07!130;UBERON:0006595!2.84e-07!130;UBERON:0009569!3.82e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.62e-13,22;UBERON:0007499,2.62e-13,22;UBERON:0006925,2.62e-13,22;UBERON:0009497,2.62e-13,22;UBERON:0000015,2.62e-13,22;UBERON:0002423,2.62e-13,22;UBERON:0006235,2.62e-13,22;UBERON:0008835,2.62e-13,22;UBERON:0003894,2.62e-13,22;UBERON:0004161,2.62e-13,22;UBERON:0008836,2.62e-13,22;UBERON:0009854,9.24e-13,23;UBERON:0009856,9.24e-13,23;UBERON:0002365,8.53e-12,25;UBERON:0002330,8.53e-12,25;UBERON:0005256,8.01e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,32.382191498269,1.94932925234301,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81791246659797,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0.287696137450811,2.43202840162553,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:67247541..67247544,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:67247541..67247544,+ | |||
|description=CAGE_peak_at_chr1:67247541..67247544,+ | |||
|id=chr1:67247541..67247544,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.84e-14!5;CL:0000417!2.84e-14!5;CL:0000668!2.84e-14!5;CL:0000412!2.84e-14!5;CL:0000182!2.84e-14!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.61e-32,5;CL:0000223,1.29e-08,20;CL:0000066,4.89e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.32e-25!22;UBERON:0007499!1.32e-25!22;UBERON:0006925!1.32e-25!22;UBERON:0009497!1.32e-25!22;UBERON:0000015!1.32e-25!22;UBERON:0002423!1.32e-25!22;UBERON:0006235!1.32e-25!22;UBERON:0008835!1.32e-25!22;UBERON:0003894!1.32e-25!22;UBERON:0004161!1.32e-25!22;UBERON:0008836!1.32e-25!22;UBERON:0009854!2.09e-24!23;UBERON:0009856!2.09e-24!23;UBERON:0002365!2.73e-22!25;UBERON:0002330!2.73e-22!25;UBERON:0003914!7.39e-13!47;UBERON:0005256!7.39e-13!47;UBERON:0003929!1.14e-10!55;UBERON:0005172!2.36e-10!49;UBERON:0005173!2.36e-10!49;UBERON:0002417!2.36e-10!49;UBERON:0000916!2.36e-10!49;UBERON:0000490!5.41e-10!66;UBERON:0005057!7.28e-10!51;UBERON:0002368!4.55e-08!60;UBERON:0005911!4.91e-08!69;UBERON:0004921!1.32e-07!126;UBERON:0004185!1.32e-07!126;UBERON:0001007!1.95e-07!128;UBERON:0001555!1.95e-07!128;UBERON:0007026!1.95e-07!128;UBERON:0002530!2.75e-07!65;UBERON:0004119!2.84e-07!130;UBERON:0000925!2.84e-07!130;UBERON:0006595!2.84e-07!130;UBERON:0009569!3.82e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.62e-13,22;UBERON:0007499,2.62e-13,22;UBERON:0006925,2.62e-13,22;UBERON:0009497,2.62e-13,22;UBERON:0000015,2.62e-13,22;UBERON:0002423,2.62e-13,22;UBERON:0006235,2.62e-13,22;UBERON:0008835,2.62e-13,22;UBERON:0003894,2.62e-13,22;UBERON:0004161,2.62e-13,22;UBERON:0008836,2.62e-13,22;UBERON:0009854,9.24e-13,23;UBERON:0009856,9.24e-13,23;UBERON:0002365,8.53e-12,25;UBERON:0002330,8.53e-12,25;UBERON:0005256,8.01e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,32.382191498269,1.94932925234301,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81791246659797,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0.287696137450811,2.43202840162553,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:67247541..67247544,+ | |||
}} |
Latest revision as of 22:08, 5 August 2015
Short description: | p@chr1:67247541..67247544, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:67247541..67247544, + |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.61e-32 | 5 |
endodermal cell | 1.29e-08 | 20 |
epithelial cell | 4.89e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 2.62e-13 | 22 |
epithelial sac | 2.62e-13 | 22 |
digestive gland | 2.62e-13 | 22 |
epithelium of foregut-midgut junction | 2.62e-13 | 22 |
anatomical boundary | 2.62e-13 | 22 |
hepatobiliary system | 2.62e-13 | 22 |
foregut-midgut junction | 2.62e-13 | 22 |
hepatic diverticulum | 2.62e-13 | 22 |
liver primordium | 2.62e-13 | 22 |
septum transversum | 2.62e-13 | 22 |
liver bud | 2.62e-13 | 22 |
digestive tract diverticulum | 9.24e-13 | 23 |
sac | 9.24e-13 | 23 |
exocrine gland | 8.53e-12 | 25 |
exocrine system | 8.53e-12 | 25 |
trunk mesenchyme | 8.01e-07 | 45 |