FFCP PHASE1:Mm9::chr11:42233231..42233287,+: Difference between revisions
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{{FFCP|EntrezGene=14401|HGNC=|MCL_coexpression_id=39|UniProt=P63137|association_with_transcript=0bp_to_ENSMUST00000007797,ENSMUST00000140463,ENSMUST00000169077,NM_008070,uc007imi.1_5end|description=CAGE_peak_3_at_Gabrb2_5end|id=chr11:42233231..42233287,+|ontology_enrichment_celltype=CL:0000117!1.86e-11!23;CL:0000337!1.86e-11!23;CL:0000540!9.83e-10!33;CL:0000047!9.83e-10!33;CL:0000031!9.83e-10!33;CL:0000404!9.83e-10!33;CL:0000393!9.54e-07!39;CL:0000211!9.54e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.59e-14,23;CL:0000337,3.59e-14,23;CL:0000540,6.12e-09,33;CL:0000047,6.12e-09,33;CL:0000031,6.12e-09,33;CL:0000404,6.12e-09,33;CL:0002610,9.78e-08,3;CL:0000393,4.14e-07,39;CL:0000211,4.14e-07,39;CL:0002614,7.71e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.74e-21!63;UBERON:0001049!5.43e-21!52;UBERON:0005068!5.43e-21!52;UBERON:0006241!5.43e-21!52;UBERON:0007135!5.43e-21!52;UBERON:0000955!8.15e-21!50;UBERON:0006238!8.15e-21!50;UBERON:0001017!1.20e-20!73;UBERON:0005743!1.20e-20!73;UBERON:0002616!4.12e-20!49;UBERON:0000073!4.81e-20!75;UBERON:0001016!4.81e-20!75;UBERON:0002346!6.81e-19!71;UBERON:0003075!6.81e-19!71;UBERON:0007284!6.81e-19!71;UBERON:0002020!2.85e-18!34;UBERON:0003056!1.06e-17!49;UBERON:0004121!2.63e-17!102;UBERON:0000924!2.63e-17!102;UBERON:0006601!2.63e-17!102;UBERON:0003080!3.11e-16!40;UBERON:0002791!8.31e-16!29;UBERON:0003528!8.31e-16!29;UBERON:0001893!8.31e-16!29;UBERON:0002780!1.83e-15!39;UBERON:0001890!1.83e-15!39;UBERON:0006240!1.83e-15!39;UBERON:0007811!4.40e-11!86;UBERON:0000956!1.33e-10!21;UBERON:0001869!1.33e-10!21;UBERON:0000203!1.33e-10!21;UBERON:0000153!1.81e-09!94;UBERON:0002021!4.81e-09!10;UBERON:0000411!4.81e-09!10;UBERON:0001950!4.81e-09!10;UBERON:0002619!2.18e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.39e-40,54;UBERON:0001049,1.87e-36,52;UBERON:0005068,1.87e-36,52;UBERON:0006241,1.87e-36,52;UBERON:0007135,1.87e-36,52;UBERON:0000955,5.31e-36,47;UBERON:0006238,5.31e-36,47;UBERON:0001017,6.64e-36,73;UBERON:0001016,1.00e-34,75;UBERON:0002616,2.54e-34,46;UBERON:0003528,2.68e-31,29;UBERON:0002791,2.68e-31,29;UBERON:0001893,2.68e-31,29;UBERON:0002020,5.42e-31,34;UBERON:0003080,1.02e-28,40;UBERON:0002346,3.43e-28,64;UBERON:0003075,3.43e-28,64;UBERON:0007284,3.43e-28,64;UBERON:0002780,6.74e-27,39;UBERON:0001890,6.74e-27,39;UBERON:0006240,6.74e-27,39;UBERON:0004121,1.16e-25,95;UBERON:0000924,1.16e-25,95;UBERON:0006601,1.16e-25,95;UBERON:0010371,8.90e-24,73;UBERON:0003056,2.76e-22,49;UBERON:0002021,3.06e-21,10;UBERON:0000411,3.06e-21,10;UBERON:0001950,3.06e-21,10;UBERON:0000956,1.05e-20,21;UBERON:0001869,1.05e-20,21;UBERON:0000203,1.05e-20,21;UBERON:0002619,9.93e-20,17;UBERON:0010314,2.70e-17,92;UBERON:0000025,1.70e-12,114;UBERON:0002420,1.17e-11,8;UBERON:0007245,1.17e-11,8;UBERON:0010009,1.17e-11,8;UBERON:0010011,1.17e-11,8;UBERON:0000454,1.17e-11,8;UBERON:0004111,3.48e-11,122;UBERON:0002950,6.80e-09,4;UBERON:0001891,6.80e-09,4;UBERON:0009616,6.80e-09,4;UBERON:0010286,6.80e-09,4;UBERON:0011216,3.06e-08,194;UBERON:0003076,6.31e-08,12;UBERON:0003057,6.31e-08,12;UBERON:0004684,9.78e-08,3;UBERON:0002275,9.78e-08,3;UBERON:0002038,7.71e-07,3;UBERON:0009663,7.71e-07,3;UBERON:0009661,7.71e-07,3;UBERON:0000125,7.71e-07,3;UBERON:0002308,7.71e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0,0,0,0,0,0,0,0,1.24427534770173,0.540023753326763,0.841299845405528,0.285650984403804,1.32521124570968,1.5923803897944,0.766763768145891,0,5.50579404996943,13.6625451751151,18.7399970572617,0.923204014111357,1.18933936683133,1.56274011167028,4.18774498502071,6.19038871034848,6.26472815884921,0.883885756421003,2.56269025438385,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,0,0,0.173485326766136,0,0,0.452167921657868,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,27.814175716097,42.7271281899448,0,0,0,0,11.833460512981,9.60751265919116,5.40313714085317,17.0347833788431,17.3886510984625,12.0517065844545,11.8436122039463,0.305518091550949,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0.452114453507145,0.95251098811859,0.640568601424249,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0.268412837520744,17.2437757822584,4.21908910755066,0,0,0.426576501070468,0,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,0,0,5.45872005958493,6.79827782234778,0,0,0,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0,4.81981974632711,0.141940085208269,0,0.977321756121456,0,0,0.971122544619926,0,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,2.41052892613663,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0,0.216010681643603,0.418176592028937,0.655087691238533,0.539457385539283,0.330613822901344,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.675824501963113,0.352071715937262,0.2604087696879,0,0,0,0.316011120628178,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,8.471277639256,11.0478056761722,8.59343270159095,9.45192502890282,11.6464028361009,10.5755145634558,13.5004500046361,10.8077088773813,9.9691329976525,9.31968561153276,0,0,0.853668028770671,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,1.01078884705519,0.50695859978048,0.188626341386076,0.468207537349412,0.960377286073039,0.574354689556133,0.952587382566147,1.15884325944855,0.578727661391115,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0.726732083161643,0.752875043322645,0.507687647350059,0.365855945745545,0.789209134313529,0.679020569229309,0,0.474540072496697,0.591026894253381,0.818462086339379,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.191288332068843,0,0|short_description=p3@Gabrb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14401 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63137 | |||
|association_with_transcript=0bp_to_ENSMUST00000007797,ENSMUST00000140463,ENSMUST00000169077,NM_008070,uc007imi.1_5end | |||
|cluster_id=chr11:42233231..42233287,+ | |||
|description=CAGE_peak_3_at_Gabrb2_5end | |||
|id=chr11:42233231..42233287,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.86e-11!23;CL:0000337!1.86e-11!23;CL:0000540!9.83e-10!33;CL:0000047!9.83e-10!33;CL:0000031!9.83e-10!33;CL:0000404!9.83e-10!33;CL:0000393!9.54e-07!39;CL:0000211!9.54e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.59e-14,23;CL:0000337,3.59e-14,23;CL:0000540,6.12e-09,33;CL:0000047,6.12e-09,33;CL:0000031,6.12e-09,33;CL:0000404,6.12e-09,33;CL:0002610,9.78e-08,3;CL:0000393,4.14e-07,39;CL:0000211,4.14e-07,39;CL:0002614,7.71e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.74e-21!63;UBERON:0001049!5.43e-21!52;UBERON:0005068!5.43e-21!52;UBERON:0006241!5.43e-21!52;UBERON:0007135!5.43e-21!52;UBERON:0000955!8.15e-21!50;UBERON:0006238!8.15e-21!50;UBERON:0001017!1.20e-20!73;UBERON:0005743!1.20e-20!73;UBERON:0002616!4.12e-20!49;UBERON:0000073!4.81e-20!75;UBERON:0001016!4.81e-20!75;UBERON:0002346!6.81e-19!71;UBERON:0003075!6.81e-19!71;UBERON:0007284!6.81e-19!71;UBERON:0002020!2.85e-18!34;UBERON:0003056!1.06e-17!49;UBERON:0004121!2.63e-17!102;UBERON:0000924!2.63e-17!102;UBERON:0006601!2.63e-17!102;UBERON:0003080!3.11e-16!40;UBERON:0002791!8.31e-16!29;UBERON:0003528!8.31e-16!29;UBERON:0001893!8.31e-16!29;UBERON:0002780!1.83e-15!39;UBERON:0001890!1.83e-15!39;UBERON:0006240!1.83e-15!39;UBERON:0007811!4.40e-11!86;UBERON:0000956!1.33e-10!21;UBERON:0001869!1.33e-10!21;UBERON:0000203!1.33e-10!21;UBERON:0000153!1.81e-09!94;UBERON:0002021!4.81e-09!10;UBERON:0000411!4.81e-09!10;UBERON:0001950!4.81e-09!10;UBERON:0002619!2.18e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.39e-40,54;UBERON:0001049,1.87e-36,52;UBERON:0005068,1.87e-36,52;UBERON:0006241,1.87e-36,52;UBERON:0007135,1.87e-36,52;UBERON:0000955,5.31e-36,47;UBERON:0006238,5.31e-36,47;UBERON:0001017,6.64e-36,73;UBERON:0001016,1.00e-34,75;UBERON:0002616,2.54e-34,46;UBERON:0003528,2.68e-31,29;UBERON:0002791,2.68e-31,29;UBERON:0001893,2.68e-31,29;UBERON:0002020,5.42e-31,34;UBERON:0003080,1.02e-28,40;UBERON:0002346,3.43e-28,64;UBERON:0003075,3.43e-28,64;UBERON:0007284,3.43e-28,64;UBERON:0002780,6.74e-27,39;UBERON:0001890,6.74e-27,39;UBERON:0006240,6.74e-27,39;UBERON:0004121,1.16e-25,95;UBERON:0000924,1.16e-25,95;UBERON:0006601,1.16e-25,95;UBERON:0010371,8.90e-24,73;UBERON:0003056,2.76e-22,49;UBERON:0002021,3.06e-21,10;UBERON:0000411,3.06e-21,10;UBERON:0001950,3.06e-21,10;UBERON:0000956,1.05e-20,21;UBERON:0001869,1.05e-20,21;UBERON:0000203,1.05e-20,21;UBERON:0002619,9.93e-20,17;UBERON:0010314,2.70e-17,92;UBERON:0000025,1.70e-12,114;UBERON:0002420,1.17e-11,8;UBERON:0007245,1.17e-11,8;UBERON:0010009,1.17e-11,8;UBERON:0010011,1.17e-11,8;UBERON:0000454,1.17e-11,8;UBERON:0004111,3.48e-11,122;UBERON:0002950,6.80e-09,4;UBERON:0001891,6.80e-09,4;UBERON:0009616,6.80e-09,4;UBERON:0010286,6.80e-09,4;UBERON:0011216,3.06e-08,194;UBERON:0003076,6.31e-08,12;UBERON:0003057,6.31e-08,12;UBERON:0004684,9.78e-08,3;UBERON:0002275,9.78e-08,3;UBERON:0002038,7.71e-07,3;UBERON:0009663,7.71e-07,3;UBERON:0009661,7.71e-07,3;UBERON:0000125,7.71e-07,3;UBERON:0002308,7.71e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0,0,0,0,0,0,0,0,1.24427534770173,0.540023753326763,0.841299845405528,0.285650984403804,1.32521124570968,1.5923803897944,0.766763768145891,0,5.50579404996943,13.6625451751151,18.7399970572617,0.923204014111357,1.18933936683133,1.56274011167028,4.18774498502071,6.19038871034848,6.26472815884921,0.883885756421003,2.56269025438385,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,0,0,0.173485326766136,0,0,0.452167921657868,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,27.814175716097,42.7271281899448,0,0,0,0,11.833460512981,9.60751265919116,5.40313714085317,17.0347833788431,17.3886510984625,12.0517065844545,11.8436122039463,0.305518091550949,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0.452114453507145,0.95251098811859,0.640568601424249,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0.268412837520744,17.2437757822584,4.21908910755066,0,0,0.426576501070468,0,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,0,0,5.45872005958493,6.79827782234778,0,0,0,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0,4.81981974632711,0.141940085208269,0,0.977321756121456,0,0,0.971122544619926,0,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,2.41052892613663,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0,0.216010681643603,0.418176592028937,0.655087691238533,0.539457385539283,0.330613822901344,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.675824501963113,0.352071715937262,0.2604087696879,0,0,0,0.316011120628178,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,8.471277639256,11.0478056761722,8.59343270159095,9.45192502890282,11.6464028361009,10.5755145634558,13.5004500046361,10.8077088773813,9.9691329976525,9.31968561153276,0,0,0.853668028770671,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,1.01078884705519,0.50695859978048,0.188626341386076,0.468207537349412,0.960377286073039,0.574354689556133,0.952587382566147,1.15884325944855,0.578727661391115,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0.726732083161643,0.752875043322645,0.507687647350059,0.365855945745545,0.789209134313529,0.679020569229309,0,0.474540072496697,0.591026894253381,0.818462086339379,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p3@Gabrb2 | |||
}} |
Revision as of 21:59, 5 August 2015
Short description: | p3@Gabrb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gabrb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000007797, ENSMUST00000140463, ENSMUST00000169077, NM_008070, uc007imi.1_5end |
EntrezGene: | 14401 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.59e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.59e-14 | 23 |
neuron | 6.12e-09 | 33 |
neuronal stem cell | 6.12e-09 | 33 |
neuroblast | 6.12e-09 | 33 |
electrically signaling cell | 6.12e-09 | 33 |
raphe nuclei neuron | 9.78e-08 | 3 |
electrically responsive cell | 4.14e-07 | 39 |
electrically active cell | 4.14e-07 | 39 |
neuron of the substantia nigra | 7.71e-07 | 3 |