FFCP PHASE1:Mm9::chr11:3863973..3863986,+: Difference between revisions
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{{FFCP|EntrezGene=64934|HGNC=|UniProt=Q9EQ61,Q5SQ20|association_with_transcript=0bp_to_ENSMUST00000020705,ENSMUST00000109985,NM_022889,uc007hua.1_5end|description=CAGE_peak_2_at_Pes1_5end|id=chr11:3863973..3863986,+|ontology_enrichment_celltype=CL:0000034!1.39e-09!97;CL:0000548!3.91e-09!115;CL:0000004!3.91e-09!115;CL:0000255!3.91e-09!115;CL:0000144!3.54e-08!121;CL:0000012!3.54e-08!121;CL:0000117!4.21e-08!23;CL:0000337!4.21e-08!23;CL:0000723!4.89e-08!91;CL:0000048!4.89e-08!91;CL:0002371!8.85e-08!118;CL:0000055!3.31e-07!50;CL:0000221!4.94e-07!44;CL:0000133!4.94e-07!44;CL:0002319!5.42e-07!43|ontology_enrichment_celltype_v019_2=CL:0000034,1.38e-09,97;CL:0000117,4.21e-08,23;CL:0000337,4.21e-08,23;CL:0000723,4.86e-08,91;CL:0000048,4.86e-08,91;CL:0000221,4.94e-07,44;CL:0000133,4.94e-07,44;CL:0002319,5.42e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=5.12476310735341,1.39590163055744,2.27499619694768,0.60492842261366,0.500895729946347,2.51818907867835,3.27057696833736,3.48632973292256,9.57363310631334,7.95819389494778,20.0325022823841,14.8376215731326,2.73921167889929,4.54586092578786,6.99530499812892,7.28910962603373,9.09430441566591,5.52058789376916,6.7186072466812,6.79023442876848,6.29320347117916,4.86525660884338,4.96279599363977,2.55987876469451,5.04700418347774,1.14846392823004,0.86152399231815,1.29282739611533,1.90023419456374,2.26827116783938,2.66076612786366,22.2260735710871,23.3724619282137,0,4.91047753577167,7.97926297720763,6.53341940039581,0.837063261473815,0.7813353445238,3.14114246384279,0.588231488031014,4.78131839470912,3.88408282424923,6.92432498865675,5.98123894195136,8.62669735159903,5.47673941043627,9.3750817243592,5.4921545683618,10.4992145500113,6.7193482380174,8.62515386189829,8.72469551500229,4.35217285206807,7.05796978199174,6.43148590089868,6.87680255853016,5.15672092277442,8.09265843438391,11.1088105647127,6.97214543856797,5.76035704517525,10.6715375533337,3.5995988691256,11.8663963508037,3.5524005747305,4.19440154725767,5.76327457982332,9.33206510776299,7.42532660824299,7.78202357000113,5.71301968807607,6.40518768759679,8.45186514583183,14.0892842396807,8.27296907949019,8.8092704799511,9.3211756802187,8.60196586234964,9.62769900430415,10.2466160834699,8.33461392890816,7.81712397203867,6.19038871034848,6.41752640662602,4.41942878210502,7.97281412474976,4.65998614563251,18.1742863999642,9.3708734532414,3.76823835312181,0,4.75979933595425,4.85732872474035,3.24888208723835,5.37632264516803,5.05599912474307,8.52151612890289,5.97507810586598,8.83348936275851,5.91542363062058,6.41632387071589,10.1922095882658,0,5.19578498426914,8.86759529162845,7.58286667522175,3.65388415100992,4.91981978929626,6.82833839698194,6.07198643681475,5.48037860961854,4.38169444786511,6.93324146542064,4.9387256996996,4.90099706185734,3.95511948374998,3.7595832799177,2.65383165584962,7.60304194752823,6.18356251689102,4.84875253135222,1.86391761218122,4.9772735491963,7.33063473847093,2.04365644166873,7.42853771936706,7.19883277192089,9.14905634926066,5.54225365797844,3.20250421973039,6.91098936620754,5.38855392596057,6.13717097592793,5.61027720310812,6.16516799657479,7.43427356107309,3.73220911830279,6.06534620240819,2.73574412652416,8.32770834961304,6.20735681970377,8.64298223065676,8.89158425230719,7.55205140579739,8.32739181851524,5.80950692270319,4.65666067330228,9.26942369611222,6.61871280587367,5.10258260075452,3.72632745126877,6.67313398141435,5.57203466435466,6.37924622864625,6.36909653819178,11.937624184325,7.72043721344146,6.81992398549422,4.97101854085205,6.0976775595085,6.84235833551856,7.10234206755631,6.09969118416952,6.17068451549513,6.0458825635106,3.21928081679543,6.42209383019432,7.5697530960201,4.59668899421467,5.18840381093477,5.11699955988663,3.51280184465681,2.81833479396781,5.67782861123144,8.54108282748061,2.31293148088659,3.70230793328962,5.97207101498655,6.96710015581316,5.02583099156164,3.42861991859682,5.11469500843202,6.27744566171445,2.84717436926707,4.11747386810027,4.27269854960458,4.57599885694647,3.50935356814416,2.69645822596266,3.24207074812041,3.58454291857861,7.77638393907635,8.3401414205102,6.76246414038483,6.10953983535943,4.65485969202302,5.96154469067708,4.23684798732524,3.69025369949005,2.66897837330337,2.71473760627961,4.44678940630723,7.17433954579204,7.66580080941492,8.7696223830093,3.44862206360455,4.10001171579109,4.32863948028414,1.72617682470486,6.97181475132652,5.21666685057355,1.43768206527355,7.07067800570156,3.74445207737473,4.04126204715379,3.76734568396016,2.8946611281802,4.61882975416512,7.20067364727842,5.21487924614483,6.45031325945715,5.39787571063555,3.68513766371995,2.14239276797412,4.29294025287157,5.51723004371669,6.42247599981447,4.30527875375215,2.94953966488328,6.38934432903814,4.91806799177139,6.03165135757089,8.15858525728064,3.44234991113325,4.96686143348518,7.06422595946285,4.33683240391152,5.90165803356032,7.82659874333556,2.83957397474631,5.8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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64934 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9EQ61,uniprot:Q5SQ20 | |||
|association_with_transcript=0bp_to_ENSMUST00000020705,ENSMUST00000109985,NM_022889,uc007hua.1_5end | |||
|cluster_id=chr11:3863973..3863986,+ | |||
|description=CAGE_peak_2_at_Pes1_5end | |||
|id=chr11:3863973..3863986,+ | |||
|ontology_enrichment_celltype=CL:0000034!1.39e-09!97;CL:0000548!3.91e-09!115;CL:0000004!3.91e-09!115;CL:0000255!3.91e-09!115;CL:0000144!3.54e-08!121;CL:0000012!3.54e-08!121;CL:0000117!4.21e-08!23;CL:0000337!4.21e-08!23;CL:0000723!4.89e-08!91;CL:0000048!4.89e-08!91;CL:0002371!8.85e-08!118;CL:0000055!3.31e-07!50;CL:0000221!4.94e-07!44;CL:0000133!4.94e-07!44;CL:0002319!5.42e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.38e-09,97;CL:0000117,4.21e-08,23;CL:0000337,4.21e-08,23;CL:0000723,4.86e-08,91;CL:0000048,4.86e-08,91;CL:0000221,4.94e-07,44;CL:0000133,4.94e-07,44;CL:0002319,5.42e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=5.12476310735341,1.39590163055744,2.27499619694768,0.60492842261366,0.500895729946347,2.51818907867835,3.27057696833736,3.48632973292256,9.57363310631334,7.95819389494778,20.0325022823841,14.8376215731326,2.73921167889929,4.54586092578786,6.99530499812892,7.28910962603373,9.09430441566591,5.52058789376916,6.7186072466812,6.79023442876848,6.29320347117916,4.86525660884338,4.96279599363977,2.55987876469451,5.04700418347774,1.14846392823004,0.86152399231815,1.29282739611533,1.90023419456374,2.26827116783938,2.66076612786366,22.2260735710871,23.3724619282137,0,4.91047753577167,7.97926297720763,6.53341940039581,0.837063261473815,0.7813353445238,3.14114246384279,0.588231488031014,4.78131839470912,3.88408282424923,6.92432498865675,5.98123894195136,8.62669735159903,5.47673941043627,9.3750817243592,5.4921545683618,10.4992145500113,6.7193482380174,8.62515386189829,8.72469551500229,4.35217285206807,7.05796978199174,6.43148590089868,6.87680255853016,5.15672092277442,8.09265843438391,11.1088105647127,6.97214543856797,5.76035704517525,10.6715375533337,3.5995988691256,11.8663963508037,3.5524005747305,4.19440154725767,5.76327457982332,9.33206510776299,7.42532660824299,7.78202357000113,5.71301968807607,6.40518768759679,8.45186514583183,14.0892842396807,8.27296907949019,8.8092704799511,9.3211756802187,8.60196586234964,9.62769900430415,10.2466160834699,8.33461392890816,7.81712397203867,6.19038871034848,6.41752640662602,4.41942878210502,7.97281412474976,4.65998614563251,18.1742863999642,9.3708734532414,3.76823835312181,0,4.75979933595425,4.85732872474035,3.24888208723835,5.37632264516803,5.05599912474307,8.52151612890289,5.97507810586598,8.83348936275851,5.91542363062058,6.41632387071589,10.1922095882658,0,5.19578498426914,8.86759529162845,7.58286667522175,3.65388415100992,4.91981978929626,6.82833839698194,6.07198643681475,5.48037860961854,4.38169444786511,6.93324146542064,4.9387256996996,4.90099706185734,3.95511948374998,3.7595832799177,2.65383165584962,7.60304194752823,6.18356251689102,4.84875253135222,1.86391761218122,4.9772735491963,7.33063473847093,2.04365644166873,7.42853771936706,7.19883277192089,9.14905634926066,5.54225365797844,3.20250421973039,6.91098936620754,5.38855392596057,6.13717097592793,5.61027720310812,6.16516799657479,7.43427356107309,3.73220911830279,6.06534620240819,2.73574412652416,8.32770834961304,6.20735681970377,8.64298223065676,8.89158425230719,7.55205140579739,8.32739181851524,5.80950692270319,4.65666067330228,9.26942369611222,6.61871280587367,5.10258260075452,3.72632745126877,6.67313398141435,5.57203466435466,6.37924622864625,6.36909653819178,11.937624184325,7.72043721344146,6.81992398549422,4.97101854085205,6.0976775595085,6.84235833551856,7.10234206755631,6.09969118416952,6.17068451549513,6.0458825635106,3.21928081679543,6.42209383019432,7.5697530960201,4.59668899421467,5.18840381093477,5.11699955988663,3.51280184465681,2.81833479396781,5.67782861123144,8.54108282748061,2.31293148088659,3.70230793328962,5.97207101498655,6.96710015581316,5.02583099156164,3.42861991859682,5.11469500843202,6.27744566171445,2.84717436926707,4.11747386810027,4.27269854960458,4.57599885694647,3.50935356814416,2.69645822596266,3.24207074812041,3.58454291857861,7.77638393907635,8.3401414205102,6.76246414038483,6.10953983535943,4.65485969202302,5.96154469067708,4.23684798732524,3.69025369949005,2.66897837330337,2.71473760627961,4.44678940630723,7.17433954579204,7.66580080941492,8.7696223830093,3.44862206360455,4.10001171579109,4.32863948028414,1.72617682470486,6.97181475132652,5.21666685057355,1.43768206527355,7.07067800570156,3.74445207737473,4.04126204715379,3.76734568396016,2.8946611281802,4.61882975416512,7.20067364727842,5.21487924614483,6.45031325945715,5.39787571063555,3.68513766371995,2.14239276797412,4.29294025287157,5.51723004371669,6.42247599981447,4.30527875375215,2.94953966488328,6.38934432903814,4.91806799177139,6.03165135757089,8.15858525728064,3.44234991113325,4.96686143348518,7.06422595946285,4.33683240391152,5.90165803356032,7.82659874333556,2.83957397474631,5.85658116444958,4.09304455692318,5.9742199488138,8.02075226696619,4.52922449262132,3.64329631507405,3.21481443702443,4.74345333535828,6.74774764485795,5.10984306749767,7.47875535402472,5.70104357737516,4.45419332025846,1.32745138339963,5.34117399540959,5.74414758233027,5.28094223316515,1.47650946440386,4.91896236710284,3.6179961043551,4.36240475373007,5.34746067577082,3.47640433729398,3.16255825724996,2.06271086496374,4.42571487479924,5.221771726908,5.82114077022395,6.00143698088458,3.01478397191865,2.49716344642899,6.58196082408484,7.61162372786498,5.86679270159276,5.50763384245932,4.85162475720916,2.96795255294664,5.8127193610526,5.36785031860587,8.11731939221328,5.58079059133208,3.78925087618806,4.82105785227325,5.63873906632914,7.01715351074956,5.92622487583077,6.40452753815949,5.87785179200408,3.88922894451088,4.9293744698218,7.27747552083022,7.18639863783004,4.77335309007557,7.59206384594725,5.28630614529807,5.50827238191186,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| |||
|short_description=p2@Pes1 | |||
}} |
Revision as of 21:22, 5 August 2015
Short description: | p2@Pes1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pes1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000020705, ENSMUST00000109985, NM_022889, uc007hua.1_5end |
EntrezGene: | 64934 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.38e-09 | 97 |
CNS neuron (sensu Vertebrata) | 4.21e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.21e-08 | 23 |
somatic stem cell | 4.86e-08 | 91 |
multi fate stem cell | 4.86e-08 | 91 |
ectodermal cell | 4.94e-07 | 44 |
neurectodermal cell | 4.94e-07 | 44 |
neural cell | 5.42e-07 | 43 |