FFCP PHASE1:Mm9::chr15:93228694..93228774,-: Difference between revisions
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{{FFCP|EntrezGene=67197|HGNC=|UniProt=Q9CZ96,E0CZE5|association_with_transcript=0bp_to_ENSMUST00000076070,ENSMUST00000159719,ENSMUST00000161409,ENSMUST00000162160,NM_026025,uc007xiu.1,uc007xiv.1,uc007xiw.1_5end|description=CAGE_peak_1_at_Zcrb1_5end|id=chr15:93228694..93228774,-|ontology_enrichment_celltype=CL:0000117!4.94e-10!23;CL:0000337!4.94e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-10,23;CL:0000337,4.94e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.32e-13!52;UBERON:0005068!3.32e-13!52;UBERON:0006241!3.32e-13!52;UBERON:0007135!3.32e-13!52;UBERON:0000955!1.12e-12!50;UBERON:0006238!1.12e-12!50;UBERON:0000033!1.31e-12!63;UBERON:0002616!1.56e-12!49;UBERON:0002020!1.54e-11!34;UBERON:0000073!3.20e-11!75;UBERON:0001016!3.20e-11!75;UBERON:0002346!8.50e-11!71;UBERON:0003075!8.50e-11!71;UBERON:0007284!8.50e-11!71;UBERON:0001017!1.41e-10!73;UBERON:0005743!1.41e-10!73;UBERON:0002791!2.88e-10!29;UBERON:0003528!2.88e-10!29;UBERON:0001893!2.88e-10!29;UBERON:0004121!4.71e-10!102;UBERON:0000924!4.71e-10!102;UBERON:0006601!4.71e-10!102;UBERON:0003080!1.72e-09!40;UBERON:0002780!4.02e-09!39;UBERON:0001890!4.02e-09!39;UBERON:0006240!4.02e-09!39;UBERON:0000025!4.97e-09!114;UBERON:0003056!7.41e-09!49;UBERON:0004111!1.48e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.27e-14,92;UBERON:0000073,6.33e-14,54;UBERON:0001049,3.32e-13,52;UBERON:0005068,3.32e-13,52;UBERON:0006241,3.32e-13,52;UBERON:0007135,3.32e-13,52;UBERON:0002020,1.54e-11,34;UBERON:0000955,1.89e-11,47;UBERON:0006238,1.89e-11,47;UBERON:0002346,2.48e-11,64;UBERON:0003075,2.48e-11,64;UBERON:0007284,2.48e-11,64;UBERON:0002616,2.62e-11,46;UBERON:0001016,3.20e-11,75;UBERON:0010371,1.30e-10,73;UBERON:0001017,1.41e-10,73;UBERON:0003528,2.88e-10,29;UBERON:0002791,2.88e-10,29;UBERON:0001893,2.88e-10,29;UBERON:0004121,2.93e-10,95;UBERON:0000924,2.93e-10,95;UBERON:0006601,2.93e-10,95;UBERON:0003080,1.72e-09,40;UBERON:0002780,4.02e-09,39;UBERON:0001890,4.02e-09,39;UBERON:0006240,4.02e-09,39;UBERON:0000025,4.97e-09,114;UBERON:0003056,7.41e-09,49;UBERON:0004111,1.48e-08,122|phase1_expression=36.1936394456834,21.9854506812797,18.654968814971,15.4256747766483,17.0304548181758,24.342494427224,15.6520469199002,21.8218416616264,20.5551534341433,14.2779361056416,32.873849899297,29.5156988282745,20.5440875917447,22.4670434216823,23.3176833270964,28.1440621671858,25.1842276126133,19.2431920868525,18.921791837592,26.3121584114779,46.7738095830884,31.4752315306806,26.6423784921714,25.7587800697385,20.8762445771125,31.5827580263261,27.5687677541808,28.6576739472232,24.1329742709595,30.4956457009516,33.9247681302616,11.4305521222734,18.4519436275371,15.8481681015439,21.3750198615943,22.7741464141135,19.8044275574498,34.3195937204264,53.1308034276184,51.828850653406,40.58797267414,33.4692287629638,48.0655249500842,32.6072758556745,36.5970721702448,46.4373282969054,32.8604364626176,37.5003268974368,36.9072786993913,40.0525592093024,27.4373386385711,18.6878333674463,35.0665646660669,26.1130371124084,20.8378155468328,22.6388303711633,18.3381401560804,23.7209162447623,46.9374189194267,37.5583595283143,47.5373552629634,21.0083609882862,26.6788438833342,27.8968912357234,19.7773272513395,22.7353636782752,22.1704081783619,35.7323023949046,40.9573968618487,38.4766924245318,35.5449184683836,55.4162909743379,42.4067598627098,41.7693625322993,54.0568456542853,41.3648453974509,34.1359231098105,56.9485527859937,52.0726147738665,44.9732241159961,53.2458085766024,56.7795573906868,56.1157827992776,45.5837714125661,45.5338778374894,26.8112012781038,41.0030440701416,46.0406631188492,42.1794896865835,38.390352534247,22.6094301187309,17.2084775396277,23.7989966797713,25.9057531986152,20.1430689408777,19.2651561451854,47.3297695844004,43.9710232251389,37.4091846628131,40.2807114941788,32.3939865486365,26.9485602570067,43.3168907501298,49.7746692207332,45.6796096533662,49.1518139021691,52.0690178365227,38.2515997058851,34.1798006414267,22.4147629987885,29.6659908770092,25.5751001782199,29.7493991460315,31.1995865943929,36.6876766263399,40.4646424081555,20.7643772896874,35.1376437315385,25.6537060065464,42.8682152360634,52.3394398751133,39.7597707570882,11.1835056730873,34.8409148443741,41.4704479490641,24.5238773000248,41.4560330790484,47.3923157484792,35.0713826721659,42.3907509515648,35.6850470198529,48.2512712113399,40.848715245185,43.7273432034865,40.1030925999951,46.7254837635142,32.5885964321012,28.2403823284911,35.6339089391481,30.7245109594252,27.7156543510559,27.3583504275833,33.3114940139896,28.7846202066216,37.0798920374737,32.2846575117821,32.4207966976662,29.4921842642478,32.766334925792,34.4173065905431,30.791446728691,33.3177513289914,25.0242524303038,24.3776516565517,22.6360350048738,25.0783176191301,37.9195121149147,39.8889256027809,33.5312929286799,29.6189854725768,30.9574399175047,34.5719158005149,29.1196024769809,33.6466836288061,32.7046279321242,37.9030329943165,37.8265495973463,52.4276387228591,52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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67197 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CZ96,uniprot:E0CZE5 | |||
|association_with_transcript=0bp_to_ENSMUST00000076070,ENSMUST00000159719,ENSMUST00000161409,ENSMUST00000162160,NM_026025,uc007xiu.1,uc007xiv.1,uc007xiw.1_5end | |||
|cluster_id=chr15:93228694..93228774,- | |||
|description=CAGE_peak_1_at_Zcrb1_5end | |||
|id=chr15:93228694..93228774,- | |||
|ontology_enrichment_celltype=CL:0000117!4.94e-10!23;CL:0000337!4.94e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-10,23;CL:0000337,4.94e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.32e-13!52;UBERON:0005068!3.32e-13!52;UBERON:0006241!3.32e-13!52;UBERON:0007135!3.32e-13!52;UBERON:0000955!1.12e-12!50;UBERON:0006238!1.12e-12!50;UBERON:0000033!1.31e-12!63;UBERON:0002616!1.56e-12!49;UBERON:0002020!1.54e-11!34;UBERON:0000073!3.20e-11!75;UBERON:0001016!3.20e-11!75;UBERON:0002346!8.50e-11!71;UBERON:0003075!8.50e-11!71;UBERON:0007284!8.50e-11!71;UBERON:0001017!1.41e-10!73;UBERON:0005743!1.41e-10!73;UBERON:0002791!2.88e-10!29;UBERON:0003528!2.88e-10!29;UBERON:0001893!2.88e-10!29;UBERON:0004121!4.71e-10!102;UBERON:0000924!4.71e-10!102;UBERON:0006601!4.71e-10!102;UBERON:0003080!1.72e-09!40;UBERON:0002780!4.02e-09!39;UBERON:0001890!4.02e-09!39;UBERON:0006240!4.02e-09!39;UBERON:0000025!4.97e-09!114;UBERON:0003056!7.41e-09!49;UBERON:0004111!1.48e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.27e-14,92;UBERON:0000073,6.33e-14,54;UBERON:0001049,3.32e-13,52;UBERON:0005068,3.32e-13,52;UBERON:0006241,3.32e-13,52;UBERON:0007135,3.32e-13,52;UBERON:0002020,1.54e-11,34;UBERON:0000955,1.89e-11,47;UBERON:0006238,1.89e-11,47;UBERON:0002346,2.48e-11,64;UBERON:0003075,2.48e-11,64;UBERON:0007284,2.48e-11,64;UBERON:0002616,2.62e-11,46;UBERON:0001016,3.20e-11,75;UBERON:0010371,1.30e-10,73;UBERON:0001017,1.41e-10,73;UBERON:0003528,2.88e-10,29;UBERON:0002791,2.88e-10,29;UBERON:0001893,2.88e-10,29;UBERON:0004121,2.93e-10,95;UBERON:0000924,2.93e-10,95;UBERON:0006601,2.93e-10,95;UBERON:0003080,1.72e-09,40;UBERON:0002780,4.02e-09,39;UBERON:0001890,4.02e-09,39;UBERON:0006240,4.02e-09,39;UBERON:0000025,4.97e-09,114;UBERON:0003056,7.41e-09,49;UBERON:0004111,1.48e-08,122 | |||
|phase1_expression=36.1936394456834,21.9854506812797,18.654968814971,15.4256747766483,17.0304548181758,24.342494427224,15.6520469199002,21.8218416616264,20.5551534341433,14.2779361056416,32.873849899297,29.5156988282745,20.5440875917447,22.4670434216823,23.3176833270964,28.1440621671858,25.1842276126133,19.2431920868525,18.921791837592,26.3121584114779,46.7738095830884,31.4752315306806,26.6423784921714,25.7587800697385,20.8762445771125,31.5827580263261,27.5687677541808,28.6576739472232,24.1329742709595,30.4956457009516,33.9247681302616,11.4305521222734,18.4519436275371,15.8481681015439,21.3750198615943,22.7741464141135,19.8044275574498,34.3195937204264,53.1308034276184,51.828850653406,40.58797267414,33.4692287629638,48.0655249500842,32.6072758556745,36.5970721702448,46.4373282969054,32.8604364626176,37.5003268974368,36.9072786993913,40.0525592093024,27.4373386385711,18.6878333674463,35.0665646660669,26.1130371124084,20.8378155468328,22.6388303711633,18.3381401560804,23.7209162447623,46.9374189194267,37.5583595283143,47.5373552629634,21.0083609882862,26.6788438833342,27.8968912357234,19.7773272513395,22.7353636782752,22.1704081783619,35.7323023949046,40.9573968618487,38.4766924245318,35.5449184683836,55.4162909743379,42.4067598627098,41.7693625322993,54.0568456542853,41.3648453974509,34.1359231098105,56.9485527859937,52.0726147738665,44.9732241159961,53.2458085766024,56.7795573906868,56.1157827992776,45.5837714125661,45.5338778374894,26.8112012781038,41.0030440701416,46.0406631188492,42.1794896865835,38.390352534247,22.6094301187309,17.2084775396277,23.7989966797713,25.9057531986152,20.1430689408777,19.2651561451854,47.3297695844004,43.9710232251389,37.4091846628131,40.2807114941788,32.3939865486365,26.9485602570067,43.3168907501298,49.7746692207332,45.6796096533662,49.1518139021691,52.0690178365227,38.2515997058851,34.1798006414267,22.4147629987885,29.6659908770092,25.5751001782199,29.7493991460315,31.1995865943929,36.6876766263399,40.4646424081555,20.7643772896874,35.1376437315385,25.6537060065464,42.8682152360634,52.3394398751133,39.7597707570882,11.1835056730873,34.8409148443741,41.4704479490641,24.5238773000248,41.4560330790484,47.3923157484792,35.0713826721659,42.3907509515648,35.6850470198529,48.2512712113399,40.848715245185,43.7273432034865,40.1030925999951,46.7254837635142,32.5885964321012,28.2403823284911,35.6339089391481,30.7245109594252,27.7156543510559,27.3583504275833,33.3114940139896,28.7846202066216,37.0798920374737,32.2846575117821,32.4207966976662,29.4921842642478,32.766334925792,34.4173065905431,30.791446728691,33.3177513289914,25.0242524303038,24.3776516565517,22.6360350048738,25.0783176191301,37.9195121149147,39.8889256027809,33.5312929286799,29.6189854725768,30.9574399175047,34.5719158005149,29.1196024769809,33.6466836288061,32.7046279321242,37.9030329943165,37.8265495973463,52.4276387228591,52.4945921224003,49.0860717596495,60.8016071593918,53.9477953599476,62.5717828579494,69.2505120803518,35.1184214102093,39.3095619288867,27.4247589876552,20.0982430664294,31.3533728286794,29.0295839825548,24.871420035164,21.5801371346977,19.3468898145037,23.5879776379573,24.6755112003146,22.8931547066375,25.3848560888272,28.0528625578023,27.2949721966768,25.1669434423182,27.4495323340862,28.0789195288658,34.7092258744139,29.2476192280906,20.2873924211545,22.4016460629846,22.304536024277,33.454786087682,27.8873128717975,25.6841657484508,32.4987366631646,27.6409647184833,29.0523574545406,28.1968228660199,33.6115881643577,35.303351644422,28.4004169943904,27.0118418922707,23.4255783638906,21.8649064462616,23.3474726556051,26.3578956660558,21.5652309791032,27.1662891798007,31.5158049845706,22.4795201372929,29.0623809905498,32.806159452709,29.93001680699,31.4555743539005,30.3114856182168,26.140743209379,30.7444225257938,22.1108259823197,21.6619713206272,36.2948585015506,30.8964882448134,31.0050565508285,33.6449561867298,29.6592599635486,36.0911612099722,36.0176155867964,16.5870412333199,26.1074728232981,34.4234991113325,25.9380541526449,46.0780193264963,57.4337264301796,29.3443552224249,83.8203478318518,29.0267561862956,20.3028147034252,27.5741949097983,26.2865677747807,20.943075363745,27.1753469557279,22.6693992937941,27.4720506436633,24.5078422326845,34.7027021735552,20.2974321847824,23.1485284767432,31.111409236533,22.7658769702099,19.9117707509944,24.5208442516531,27.2091201268276,19.9921384541252,18.6040192514887,25.2096821314021,27.1349707826632,26.9014959813354,29.5892824059319,23.0706833293146,27.4088382294997,29.9093075419742,34.0439605753788,28.449652856947,29.7524972700335,24.2200849585699,31.5665615883247,30.322698992352,28.4669805641669,27.0973804711993,25.109872762817,32.8339709838921,29.5508053393649,36.4398619000671,28.2562746717835,34.3180542841207,22.9194900486022,24.2928531622691,22.1525435838687,51.9190845629427,23.7510524309015,22.7025554759545,24.6308721401717,30.7040584917646,29.5259531877414,24.4792645330979,46.2341329583286,51.0822800981352,46.296991224482,47.7335309007557,33.53161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| |||
|short_description=p1@Zcrb1 | |||
}} |
Revision as of 21:09, 5 August 2015
Short description: | p1@Zcrb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zcrb1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000076070, ENSMUST00000159719, ENSMUST00000161409, ENSMUST00000162160, NM_026025, uc007xiu.1, uc007xiv.1, uc007xiw.1_5end |
EntrezGene: | 67197 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.94e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.94e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.27e-14 | 92 |
regional part of nervous system | 6.33e-14 | 54 |
neural tube | 3.32e-13 | 52 |
neural rod | 3.32e-13 | 52 |
future spinal cord | 3.32e-13 | 52 |
neural keel | 3.32e-13 | 52 |
gray matter | 1.54e-11 | 34 |
brain | 1.89e-11 | 47 |
future brain | 1.89e-11 | 47 |
neurectoderm | 2.48e-11 | 64 |
neural plate | 2.48e-11 | 64 |
presumptive neural plate | 2.48e-11 | 64 |
regional part of brain | 2.62e-11 | 46 |
nervous system | 3.20e-11 | 75 |
ecto-epithelium | 1.30e-10 | 73 |
central nervous system | 1.41e-10 | 73 |
brain grey matter | 2.88e-10 | 29 |
regional part of telencephalon | 2.88e-10 | 29 |
telencephalon | 2.88e-10 | 29 |
ectoderm-derived structure | 2.93e-10 | 95 |
ectoderm | 2.93e-10 | 95 |
presumptive ectoderm | 2.93e-10 | 95 |
anterior neural tube | 1.72e-09 | 40 |
regional part of forebrain | 4.02e-09 | 39 |
forebrain | 4.02e-09 | 39 |
future forebrain | 4.02e-09 | 39 |
tube | 4.97e-09 | 114 |
pre-chordal neural plate | 7.41e-09 | 49 |
anatomical conduit | 1.48e-08 | 122 |