FFCP PHASE1:Mm9::chr1:63319777..63319804,+: Difference between revisions
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{{FFCP|EntrezGene=73884|HGNC=|MCL_coexpression_id=463|UniProt=Q5SS00|association_with_transcript=-34bp_to_ENSMUST00000114132_5end|description=CAGE_peak_2_at_Zdbf2_5end|id=chr1:63319777..63319804,+|ontology_enrichment_celltype=CL:0000117!7.85e-07!23;CL:0000337!7.85e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.13e-07,23;CL:0000337,2.13e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.71e-11!71;UBERON:0003075!2.71e-11!71;UBERON:0007284!2.71e-11!71;UBERON:0001049!1.61e-10!52;UBERON:0005068!1.61e-10!52;UBERON:0006241!1.61e-10!52;UBERON:0007135!1.61e-10!52;UBERON:0003056!2.28e-10!49;UBERON:0000033!9.91e-10!63;UBERON:0002616!2.44e-09!49;UBERON:0000955!3.52e-09!50;UBERON:0006238!3.52e-09!50;UBERON:0003080!4.69e-09!40;UBERON:0002780!1.01e-08!39;UBERON:0001890!1.01e-08!39;UBERON:0006240!1.01e-08!39;UBERON:0000468!6.38e-08!333;UBERON:0002020!2.03e-07!34;UBERON:0004121!8.00e-07!102;UBERON:0000924!8.00e-07!102;UBERON:0006601!8.00e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.94e-12,54;UBERON:0001049,6.77e-11,52;UBERON:0005068,6.77e-11,52;UBERON:0006241,6.77e-11,52;UBERON:0007135,6.77e-11,52;UBERON:0002346,8.67e-11,64;UBERON:0003075,8.67e-11,64;UBERON:0007284,8.67e-11,64;UBERON:0003056,1.20e-10,49;UBERON:0010314,1.58e-09,92;UBERON:0003080,2.25e-09,40;UBERON:0002780,5.19e-09,39;UBERON:0001890,5.19e-09,39;UBERON:0006240,5.19e-09,39;UBERON:0010371,9.11e-09,73;UBERON:0002616,1.72e-08,46;UBERON:0000955,5.07e-08,47;UBERON:0006238,5.07e-08,47;UBERON:0002020,1.37e-07,34|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0.85960031981627,1.03134418455488,4.85559506063035,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,2.07379224616955,1.35005938331691,1.05162480675691,5.14171771926846,3.97563373712904,3.06226998037385,2.68367318851062,2.75765635983006,7.70811166995721,3.57524546638526,5.9906547969935,6.4624280987795,5.58074625974699,5.73004707612436,3.62937898701795,6.75315132038016,8.55670187550137,10.606629077052,12.6710795911202,7.08317894136142,0.302904773332736,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0,0,0,0.5709193985953,0,2.22663208597237,5.55153045651635,2.74018930480927,2.07553947530453,3.16517545160507,4.11560474974967,0.879666139307728,2.47194967734374,0,0,5.82360659810673,0.220841518460394,0.484875253135222,0,0.878342391034642,1.8850203613211,0,0,0,0,5.54225365797844,5.49000723382352,8.79580464790051,3.12883776346098,3.58001640262463,6.44142938134636,5.19172041816825,4.68461073711455,0,0.252722758433675,0.210441855886474,5.33493816147085,2.98872735763515,5.58192602396583,2.86339153887859,5.44291993210623,4.22775276940004,5.34099829990454,1.55222022443409,4.095791865724,7.37513712654495,6.862093842394,4.3839146485515,4.72680323683516,4.52727816478817,3.49829631893504,4.17971960318836,0,0,0,4.55676699578104,6.3322036194896,4.14142741360334,3.31442629819294,2.75469924446365,2.93107514486019,2.09280550275367,1.3413670069981,2.10177616260905,1.31647879930784,0,0.405344047729279,0.146199987425332,0,0.134206418760372,2.94405927989778,3.70456604565424,0,0.528901133327089,6.82522401712749,5.57368012465052,3.8660238396628,2.21851877085677,1.33426826306922,1.71203063501303,0.474529061544512,0.823494773620054,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0.199141273254367,1.70701110857774,3.65595240351132,2.25415471346161,2.24016460629846,1.93952487167626,2.10407459670956,0.252946148497029,0,0,0.246794327843601,0,1.66845105716094,1.76903095601883,0.224862112384854,0.811440485554012,0.241177159752417,0.763877555344259,0.287696137450811,0.486405680325106,0,0,0,0.936113019343682,0,0,0,0.184753190166605,4.73728529426212,3.09633455239849,2.8856664581782,1.17345124144251,1.17254380209271,0.952174563544055,0.390267295715598,1.41871629695572,1.32878813789265,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,5.29816946959713,5.62616095642575,0,2.7771801992481,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.425820255624806,1.95872164033981,2.11753047159649,0.494910368917606,0,2.6705869977048,3.02323556964751,1.32023555829129,0.295301892880773,2.76691633149535,2.32585463851399,1.09060118843252,2.13898427030833,0.316036757935816,0,0,7.14923172082955,5.76195500900193,2.45781499187234,6.00143698088458,8.86701168211368,6.59964625127661,5.92376474167636,2.43571959291679,0.23467170806371,5.50763384245932,0.220528398054962,0,2.26050197374268,1.44751019827574,0.716234064018819,0.164140899745061,0.291480836629851,3.15223013417866,0,3.50857675537478,0.925972636848558,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,4.4287039101359,5.69294507955176,2.59212817972323,1.04544148007234,1.31017538247707,1.48350781023303,1.57041565878138,0,0,0,19.7292528539467,4.33597983527538,3.64008679005615,7.77804753376191,5.8121920564979,7.43406952159424,6.92407708009948,3.77592716047455,3.35549902162275,4.34851417486811,12.3852902690882,0.316011120628178,3.44632865993279,1.64337531463724,0.389762468933385,0.358053391334963,0.596044064343795,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,1.77588762699252,0.807424709485281,1.34307693091263,0.386379188064381,0.187682475451182,0,0,0,4.51801474093653,3.22227665555024,4.01026859407578,4.81188910562325,2.05524755931193,1.5107877947794,3.37511250115903,1.80128481289688,4.53142408984205,5.69536342927002,6.53860289780313,7.18244772121856,3.75613932659095,5.10524105843418,6.91723436672342,7.35374033800057,8.22312892865976,7.62329711783909,9.62757628775446,5.81203587056734,5.0695859978048,6.03604292435444,6.08669798554236,6.78666615491614,7.86865924691902,7.1444053692461,8.22778714208474,6.36600427530227,8.65380391686944,6.18235464564469,6.85738504770831,4.79184676630211,9.29901140794552,5.0871245821315,7.0582035311498,7.86915853392591,4.75612729469209,7.62902163169744,7.60503037536826,6.73370725989286,8.54172130494054,7.2893316957917,6.13846564754534,6.35241048862461,7.52335782826451,5.9954538705107,5.14649538579898,4.94203424311086,5.7386499620653,3.75005412503176,2.55054619182464|short_description=p2@Zdbf2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:73884 | |||
|HGNC= | |||
|MCL_coexpression_id=463 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5SS00 | |||
|association_with_transcript=-34bp_to_ENSMUST00000114132_5end | |||
|cluster_id=chr1:63319777..63319804,+ | |||
|description=CAGE_peak_2_at_Zdbf2_5end | |||
|id=chr1:63319777..63319804,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.85e-07!23;CL:0000337!7.85e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.13e-07,23;CL:0000337,2.13e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.71e-11!71;UBERON:0003075!2.71e-11!71;UBERON:0007284!2.71e-11!71;UBERON:0001049!1.61e-10!52;UBERON:0005068!1.61e-10!52;UBERON:0006241!1.61e-10!52;UBERON:0007135!1.61e-10!52;UBERON:0003056!2.28e-10!49;UBERON:0000033!9.91e-10!63;UBERON:0002616!2.44e-09!49;UBERON:0000955!3.52e-09!50;UBERON:0006238!3.52e-09!50;UBERON:0003080!4.69e-09!40;UBERON:0002780!1.01e-08!39;UBERON:0001890!1.01e-08!39;UBERON:0006240!1.01e-08!39;UBERON:0000468!6.38e-08!333;UBERON:0002020!2.03e-07!34;UBERON:0004121!8.00e-07!102;UBERON:0000924!8.00e-07!102;UBERON:0006601!8.00e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.94e-12,54;UBERON:0001049,6.77e-11,52;UBERON:0005068,6.77e-11,52;UBERON:0006241,6.77e-11,52;UBERON:0007135,6.77e-11,52;UBERON:0002346,8.67e-11,64;UBERON:0003075,8.67e-11,64;UBERON:0007284,8.67e-11,64;UBERON:0003056,1.20e-10,49;UBERON:0010314,1.58e-09,92;UBERON:0003080,2.25e-09,40;UBERON:0002780,5.19e-09,39;UBERON:0001890,5.19e-09,39;UBERON:0006240,5.19e-09,39;UBERON:0010371,9.11e-09,73;UBERON:0002616,1.72e-08,46;UBERON:0000955,5.07e-08,47;UBERON:0006238,5.07e-08,47;UBERON:0002020,1.37e-07,34 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0.85960031981627,1.03134418455488,4.85559506063035,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,2.07379224616955,1.35005938331691,1.05162480675691,5.14171771926846,3.97563373712904,3.06226998037385,2.68367318851062,2.75765635983006,7.70811166995721,3.57524546638526,5.9906547969935,6.4624280987795,5.58074625974699,5.73004707612436,3.62937898701795,6.75315132038016,8.55670187550137,10.606629077052,12.6710795911202,7.08317894136142,0.302904773332736,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0,0,0,0.5709193985953,0,2.22663208597237,5.55153045651635,2.74018930480927,2.07553947530453,3.16517545160507,4.11560474974967,0.879666139307728,2.47194967734374,0,0,5.82360659810673,0.220841518460394,0.484875253135222,0,0.878342391034642,1.8850203613211,0,0,0,0,5.54225365797844,5.49000723382352,8.79580464790051,3.12883776346098,3.58001640262463,6.44142938134636,5.19172041816825,4.68461073711455,0,0.252722758433675,0.210441855886474,5.33493816147085,2.98872735763515,5.58192602396583,2.86339153887859,5.44291993210623,4.22775276940004,5.34099829990454,1.55222022443409,4.095791865724,7.37513712654495,6.862093842394,4.3839146485515,4.72680323683516,4.52727816478817,3.49829631893504,4.17971960318836,0,0,0,4.55676699578104,6.3322036194896,4.14142741360334,3.31442629819294,2.75469924446365,2.93107514486019,2.09280550275367,1.3413670069981,2.10177616260905,1.31647879930784,0,0.405344047729279,0.146199987425332,0,0.134206418760372,2.94405927989778,3.70456604565424,0,0.528901133327089,6.82522401712749,5.57368012465052,3.8660238396628,2.21851877085677,1.33426826306922,1.71203063501303,0.474529061544512,0.823494773620054,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0.199141273254367,1.70701110857774,3.65595240351132,2.25415471346161,2.24016460629846,1.93952487167626,2.10407459670956,0.252946148497029,0,0,0.246794327843601,0,1.66845105716094,1.76903095601883,0.224862112384854,0.811440485554012,0.241177159752417,0.763877555344259,0.287696137450811,0.486405680325106,0,0,0,0.936113019343682,0,0,0,0.184753190166605,4.73728529426212,3.09633455239849,2.8856664581782,1.17345124144251,1.17254380209271,0.952174563544055,0.390267295715598,1.41871629695572,1.32878813789265,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,5.29816946959713,5.62616095642575,0,2.7771801992481,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.425820255624806,1.95872164033981,2.11753047159649,0.494910368917606,0,2.6705869977048,3.02323556964751,1.32023555829129,0.295301892880773,2.76691633149535,2.32585463851399,1.09060118843252,2.13898427030833,0.316036757935816,0,0,7.14923172082955,5.76195500900193,2.45781499187234,6.00143698088458,8.86701168211368,6.59964625127661,5.92376474167636,2.43571959291679,0.23467170806371,5.50763384245932,0.220528398054962,0,2.26050197374268,1.44751019827574,0.716234064018819,0.164140899745061,0.291480836629851,3.15223013417866,0,3.50857675537478,0.925972636848558,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,4.4287039101359,5.69294507955176,2.59212817972323,1.04544148007234,1.31017538247707,1.48350781023303,1.57041565878138,0,0,0,19.7292528539467,4.33597983527538,3.64008679005615,7.77804753376191,5.8121920564979,7.43406952159424,6.92407708009948,3.77592716047455,3.35549902162275,4.34851417486811,12.3852902690882,0.316011120628178,3.44632865993279,1.64337531463724,0.389762468933385,0.358053391334963,0.596044064343795,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,1.77588762699252,0.807424709485281,1.34307693091263,0.386379188064381,0.187682475451182,0,0,0,4.51801474093653,3.22227665555024,4.01026859407578,4.81188910562325,2.05524755931193,1.5107877947794,3.37511250115903,1.80128481289688,4.53142408984205,5.69536342927002,6.53860289780313,7.18244772121856,3.75613932659095,5.10524105843418,6.91723436672342,7.35374033800057,8.22312892865976,7.62329711783909,9.62757628775446,5.81203587056734,5.0695859978048,6.03604292435444,6.08669798554236,6.78666615491614,7.86865924691902,7.1444053692461,8.22778714208474,6.36600427530227,8.65380391686944,6.18235464564469,6.85738504770831,4.79184676630211,9.29901140794552,5.0871245821315,7.0582035311498,7.86915853392591,4.75612729469209,7.62902163169744,7.60503037536826,6.73370725989286,8.54172130494054,7.2893316957917,6.13846564754534,6.35241048862461,7.52335782826451,5.9954538705107,5.14649538579898,4.94203424311086,5.7386499620653,3.75005412503176,2.55054619182464 | |||
|short_description=p2@Zdbf2 | |||
}} |
Revision as of 20:44, 5 August 2015
Short description: | p2@Zdbf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zdbf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:463 |
Association with transcript: | -34bp_to_ENSMUST00000114132_5end |
EntrezGene: | 73884 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.13e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.13e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.94e-12 | 54 |
neural tube | 6.77e-11 | 52 |
neural rod | 6.77e-11 | 52 |
future spinal cord | 6.77e-11 | 52 |
neural keel | 6.77e-11 | 52 |
neurectoderm | 8.67e-11 | 64 |
neural plate | 8.67e-11 | 64 |
presumptive neural plate | 8.67e-11 | 64 |
pre-chordal neural plate | 1.20e-10 | 49 |
structure with developmental contribution from neural crest | 1.58e-09 | 92 |
anterior neural tube | 2.25e-09 | 40 |
regional part of forebrain | 5.19e-09 | 39 |
forebrain | 5.19e-09 | 39 |
future forebrain | 5.19e-09 | 39 |
ecto-epithelium | 9.11e-09 | 73 |
regional part of brain | 1.72e-08 | 46 |
brain | 5.07e-08 | 47 |
future brain | 5.07e-08 | 47 |
gray matter | 1.37e-07 | 34 |