FFCP PHASE1:Mm9::chrM:13563..13607,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=89|UniProt=|association_with_transcript=462bp_to_uc012hdm.1_5end|description=CAGE_peak_3_at_uc012hdm.1_5end|id=chrM:13563..13607,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!8.78e-10!333;UBERON:0000922!2.04e-08!328;UBERON:0007100!4.94e-08!18;UBERON:0000948!4.94e-08!18;UBERON:0005498!4.94e-08!18;UBERON:0004140!4.94e-08!18;UBERON:0009881!4.94e-08!18;UBERON:0004141!4.94e-08!18;UBERON:0003084!4.94e-08!18;UBERON:0007005!4.94e-08!18;UBERON:0004139!4.94e-08!18;UBERON:0004291!4.94e-08!18;UBERON:0003914!3.69e-07!47;UBERON:0003103!8.42e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.94e-08,18;UBERON:0000948,4.94e-08,18;UBERON:0005498,4.94e-08,18;UBERON:0004140,4.94e-08,18;UBERON:0009881,4.94e-08,18;UBERON:0004141,4.94e-08,18;UBERON:0003084,4.94e-08,18;UBERON:0007005,4.94e-08,18;UBERON:0004139,4.94e-08,18;UBERON:0004291,4.94e-08,18;UBERON:0003914,3.69e-07,47;UBERON:0000922,4.15e-07,320;UBERON:0003103,8.41e-07,43|phase1_expression=2.24208385946712,1.04692622291808,2.72999543633722,1.51232105653415,2.50447864973174,1.00727563147134,0.467225281191051,1.54947988129892,2.111830832275,1.40438715793196,1.02730780935303,1.27635454392538,1.02720437958723,1.92324885321794,5.3297561890506,2.42970320867791,1.39912375625629,2.36596624018678,2.4680598049033,2.12194825899015,5.69790044012167,3.3758923408301,1.82839852397255,2.87986361028132,3.89995777814189,4.59385571292016,1.29228598847722,1.07735616342945,2.28028103347649,1.26015064879965,1.10865255327652,1.90509202037889,3.07532393792285,0,3.75507105676657,4.3221007793208,3.87921776898501,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,0,0.971020706062307,8.56098362233926,6.9950082541465,3.67093504323363,23.4717403304412,4.79655344036982,9.22681967484782,9.13820525649132,5.73944328663986,0,1.34226084846189,0,2.35265659399725,8.7468208252222,9.16907007804022,10.3134418455488,2.02316460859598,2.11596391708813,0.633831403506179,4.40497891689872,6.22506357277798,8.99899717281399,15.8218618010716,12.0781619540837,6.5912024314049,4.2264013585371,4.66603255388149,4.99521971827255,5.8890989178387,6.85562362569129,4.19650227808066,1.71487118900936,3.06705507258356,1.83843757322004,27.5289702498472,16.7270412891596,24.7306518542552,2.2420668914133,4.48289453651807,6.25096044668112,8.37548997004143,20.8222165711722,49.5066322796865,16.4992007865254,8.11518580554887,3.72798891650601,2.34751199332871,2.64500460373749,1.15945795480671,8.60423876981386,11.5595126730318,110.099451094115,31.1892680374881,13.4408066129201,9.26933172869562,0.681721290312231,3.63700406444016,4.24007489412408,1.97180787687353,2.56652954828636,5.09610479413291,0,6.92771331235885,7.09407623330276,10.6160133453104,10.5049169341535,2.33044095282455,3.41416919849097,7.98032503124225,19.7902560902892,9.68585088475446,26.9793526589194,17.6383060703557,14.5773245942424,10.1349936771093,9.68815691363408,0,16.6619855445831,12.8088080707028,32.4866419600599,3.72783522436244,3.51336956413857,8.79676168616511,6.13096932500619,1.1981512450592,1.19980546198682,0.889491589511453,4.79330046095433,7.32000964509802,3.8952849154988,5.73620256634512,12.5300574091862,5.194701113989,9.08551073179443,7.43427356107309,8.8328949133166,5.81262344397452,3.57751155007006,6.8963834770233,1.60931473103431,4.68161537493908,17.0296444154358,5.44291993210623,5.89323113310309,5.43470002446427,13.4525752784288,3.23351989399263,4.9167580843633,3.51902248327898,2.6303487891309,16.1267404550847,6.96504333044333,12.1411460480687,10.1507476077432,0,0.51469581422943,2.27330799516474,5.59239585845855,22.7490278181663,33.4915434317488,13.9679393995274,35.6143259462801,61.0897767034018,80.4567448836411,28.9735273511589,34.5625413406822,29.2916532845995,59.2644545325534,7.53939928776458,29.5323974599171,56.204829514509,37.7120036716645,7.36014819974445,4.93942139420565,13.5471701023357,7.93351699990633,12.5840067815788,17.1855137176724,3.35055399437443,6.05050573870028,5.55945109612176,7.41879941838981,10.4396393539793,15.811099653505,13.5721012752146,10.3457365461398,8.38345574612217,25.1669434423182,44.524438274187,13.541606581297,1.51734320762465,17.708519454508,6.76246414038483,26.6783239477362,21.9166310499417,10.9411879028897,7.8413306034079,11.6612016903886,60.758507674612,19.3733547357227,7.41131567717872,3.33690211432188,2.35870794135844,3.37293168577281,2.23146133527353,3.13530307678142,4.58326533206556,4.31544206176216,21.4018499343047,36.7912293672029,261.658135879785,18.2349064357567,20.2824487524464,17.1753637004036,14.8899853223187,14.473305640901,4.0645701836653,2.27389694124582,2.60743962307241,14.0888421193406,11.9692026627136,3.85264392116176,3.09456733151818,7.61021226645415,6.14777062014145,9.7444463445461,3.50800491046472,18.0249646187312,20.7221978239075,7.23245292907558,12.0633027151418,9.24639662491806,8.35999264132362,3.58717770196152,6.10092241953609,8.79087649441524,11.639381121744,26.7619182836635,5.36363973007636,4.29482618726302,14.2179442503647,7.40803273652911,14.2591151412732,8.20921939287614,8.90583543684768,10.8134667427185,10.2774822266096,8.9969968598106,4.11626247103979,5.52003371368491,6.02681749608232,4.12425307431339,7.96470830039777,17.4802058031587,6.65111825322452,16.4086419387631,0.885905678642318,3.99665692327106,6.46070732920553,7.27067458955011,9.26893183800275,6.95280867458795,15.8127912862498,4.12542172992747,6.80879211507576,13.1444598642856,6.07985813778946,7.50179622610573,3.90148514013002,16.4099312193905,11.8475294833527,9.13394847343798,3.05073220482823,14.192748747876,3.52845436887939,3.79238381765404,11.1410454420175,4.28221766989907,5.84924485615369,4.10352249362653,18.0718118710507,5.93360966433631,1.87957968877638,5.98521917093345,15.5563402990558,6.78126445216888,5.87785179200408,6.86334519619568,1.35982743995084,1.81936888020755,1.93479963326193,10.5013767981662,2.84702394223022,5.69294507955176,17.38885987231,17.3543285692009,20.9628061196331,17.1277719908722,4.29797969771747,9.94672579539312,19.8310909136443,14.2908042009993,1.69107881605257,4.18646328923141,4.30192075188454,6.02798683866548,8.65370817300798,35.9876547295357,22.6499470586305,9.24451132392046,6.18670132111694,20.7762343910365,10.0810502190253,2.8441000856536,7.70355818102624,12.3253148597793,7.40548690973432,3.58053391334963,3.3775830312815,4.80781798079875,2.95379054349154,5.04832249740738,4.72482201260999,7.05783295957884,6.52967800956341,6.06134602334076,4.44132228289962,5.66825959038028,14.8730588760623,16.4176357595341,7.72269235274761,3.47741269257943,4.129014459926,3.29672923681077,3.21552568618599,4.01257683228291,24.2843292325339,16.1113832777512,18.9055519435001,21.3097946106173,13.0165678756422,26.4387864086395,6.75022500231806,14.4102785031751,8.60970577069989,18.1216109113137,2.69847103718859,1.19707462020309,1.87806966329548,4.132814190161,0.209613162627982,0,7.11189528965169,7.62329711783909,4.1719497246936,4.54854981174835,6.33698249725599,9.05406438653166,9.92599979180754,7.04276676453562,6.26046611616185,8.09699275181225,6.83717523074647,8.29509647993932,8.24171801606613,6.47675248591348,19.8864166383541,17.2151531974557,12.1602456873134,9.59286349773368,6.7758753899038,8.79991922073436,11.7073902638574,14.994973551957,9.64209208305619,8.97827634652382,6.28765596058123,10.4414751318097,12.2769312950907,5.57772628269478,4.43685205256625,3.74715866906919,5.6143586026898,2.79332370262788,7.65153328275374,5.51478547798789,11.1296561097802|short_description=p3@uc012hdm.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=89 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=462bp_to_uc012hdm.1_5end | |||
|cluster_id=chrM:13563..13607,- | |||
|description=CAGE_peak_3_at_uc012hdm.1_5end | |||
|id=chrM:13563..13607,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.78e-10!333;UBERON:0000922!2.04e-08!328;UBERON:0007100!4.94e-08!18;UBERON:0000948!4.94e-08!18;UBERON:0005498!4.94e-08!18;UBERON:0004140!4.94e-08!18;UBERON:0009881!4.94e-08!18;UBERON:0004141!4.94e-08!18;UBERON:0003084!4.94e-08!18;UBERON:0007005!4.94e-08!18;UBERON:0004139!4.94e-08!18;UBERON:0004291!4.94e-08!18;UBERON:0003914!3.69e-07!47;UBERON:0003103!8.42e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.94e-08,18;UBERON:0000948,4.94e-08,18;UBERON:0005498,4.94e-08,18;UBERON:0004140,4.94e-08,18;UBERON:0009881,4.94e-08,18;UBERON:0004141,4.94e-08,18;UBERON:0003084,4.94e-08,18;UBERON:0007005,4.94e-08,18;UBERON:0004139,4.94e-08,18;UBERON:0004291,4.94e-08,18;UBERON:0003914,3.69e-07,47;UBERON:0000922,4.15e-07,320;UBERON:0003103,8.41e-07,43 | |||
|phase1_expression=2.24208385946712,1.04692622291808,2.72999543633722,1.51232105653415,2.50447864973174,1.00727563147134,0.467225281191051,1.54947988129892,2.111830832275,1.40438715793196,1.02730780935303,1.27635454392538,1.02720437958723,1.92324885321794,5.3297561890506,2.42970320867791,1.39912375625629,2.36596624018678,2.4680598049033,2.12194825899015,5.69790044012167,3.3758923408301,1.82839852397255,2.87986361028132,3.89995777814189,4.59385571292016,1.29228598847722,1.07735616342945,2.28028103347649,1.26015064879965,1.10865255327652,1.90509202037889,3.07532393792285,0,3.75507105676657,4.3221007793208,3.87921776898501,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,0,0.971020706062307,8.56098362233926,6.9950082541465,3.67093504323363,23.4717403304412,4.79655344036982,9.22681967484782,9.13820525649132,5.73944328663986,0,1.34226084846189,0,2.35265659399725,8.7468208252222,9.16907007804022,10.3134418455488,2.02316460859598,2.11596391708813,0.633831403506179,4.40497891689872,6.22506357277798,8.99899717281399,15.8218618010716,12.0781619540837,6.5912024314049,4.2264013585371,4.66603255388149,4.99521971827255,5.8890989178387,6.85562362569129,4.19650227808066,1.71487118900936,3.06705507258356,1.83843757322004,27.5289702498472,16.7270412891596,24.7306518542552,2.2420668914133,4.48289453651807,6.25096044668112,8.37548997004143,20.8222165711722,49.5066322796865,16.4992007865254,8.11518580554887,3.72798891650601,2.34751199332871,2.64500460373749,1.15945795480671,8.60423876981386,11.5595126730318,110.099451094115,31.1892680374881,13.4408066129201,9.26933172869562,0.681721290312231,3.63700406444016,4.24007489412408,1.97180787687353,2.56652954828636,5.09610479413291,0,6.92771331235885,7.09407623330276,10.6160133453104,10.5049169341535,2.33044095282455,3.41416919849097,7.98032503124225,19.7902560902892,9.68585088475446,26.9793526589194,17.6383060703557,14.5773245942424,10.1349936771093,9.68815691363408,0,16.6619855445831,12.8088080707028,32.4866419600599,3.72783522436244,3.51336956413857,8.79676168616511,6.13096932500619,1.1981512450592,1.19980546198682,0.889491589511453,4.79330046095433,7.32000964509802,3.8952849154988,5.73620256634512,12.5300574091862,5.194701113989,9.08551073179443,7.43427356107309,8.8328949133166,5.81262344397452,3.57751155007006,6.8963834770233,1.60931473103431,4.68161537493908,17.0296444154358,5.44291993210623,5.89323113310309,5.43470002446427,13.4525752784288,3.23351989399263,4.9167580843633,3.51902248327898,2.6303487891309,16.1267404550847,6.96504333044333,12.1411460480687,10.1507476077432,0,0.51469581422943,2.27330799516474,5.59239585845855,22.7490278181663,33.4915434317488,13.9679393995274,35.6143259462801,61.0897767034018,80.4567448836411,28.9735273511589,34.5625413406822,29.2916532845995,59.2644545325534,7.53939928776458,29.5323974599171,56.204829514509,37.7120036716645,7.36014819974445,4.93942139420565,13.5471701023357,7.93351699990633,12.5840067815788,17.1855137176724,3.35055399437443,6.05050573870028,5.55945109612176,7.41879941838981,10.4396393539793,15.811099653505,13.5721012752146,10.3457365461398,8.38345574612217,25.1669434423182,44.524438274187,13.541606581297,1.51734320762465,17.708519454508,6.76246414038483,26.6783239477362,21.9166310499417,10.9411879028897,7.8413306034079,11.6612016903886,60.758507674612,19.3733547357227,7.41131567717872,3.33690211432188,2.35870794135844,3.37293168577281,2.23146133527353,3.13530307678142,4.58326533206556,4.31544206176216,21.4018499343047,36.7912293672029,261.658135879785,18.2349064357567,20.2824487524464,17.1753637004036,14.8899853223187,14.473305640901,4.0645701836653,2.27389694124582,2.60743962307241,14.0888421193406,11.9692026627136,3.85264392116176,3.09456733151818,7.61021226645415,6.14777062014145,9.7444463445461,3.50800491046472,18.0249646187312,20.7221978239075,7.23245292907558,12.0633027151418,9.24639662491806,8.35999264132362,3.58717770196152,6.10092241953609,8.79087649441524,11.639381121744,26.7619182836635,5.36363973007636,4.29482618726302,14.2179442503647,7.40803273652911,14.2591151412732,8.20921939287614,8.90583543684768,10.8134667427185,10.2774822266096,8.9969968598106,4.11626247103979,5.52003371368491,6.02681749608232,4.12425307431339,7.96470830039777,17.4802058031587,6.65111825322452,16.4086419387631,0.885905678642318,3.99665692327106,6.46070732920553,7.27067458955011,9.26893183800275,6.95280867458795,15.8127912862498,4.12542172992747,6.80879211507576,13.1444598642856,6.07985813778946,7.50179622610573,3.90148514013002,16.4099312193905,11.8475294833527,9.13394847343798,3.05073220482823,14.192748747876,3.52845436887939,3.79238381765404,11.1410454420175,4.28221766989907,5.84924485615369,4.10352249362653,18.0718118710507,5.93360966433631,1.87957968877638,5.98521917093345,15.5563402990558,6.78126445216888,5.87785179200408,6.86334519619568,1.35982743995084,1.81936888020755,1.93479963326193,10.5013767981662,2.84702394223022,5.69294507955176,17.38885987231,17.3543285692009,20.9628061196331,17.1277719908722,4.29797969771747,9.94672579539312,19.8310909136443,14.2908042009993,1.69107881605257,4.18646328923141,4.30192075188454,6.02798683866548,8.65370817300798,35.9876547295357,22.6499470586305,9.24451132392046,6.18670132111694,20.7762343910365,10.0810502190253,2.8441000856536,7.70355818102624,12.3253148597793,7.40548690973432,3.58053391334963,3.3775830312815,4.80781798079875,2.95379054349154,5.04832249740738,4.72482201260999,7.05783295957884,6.52967800956341,6.06134602334076,4.44132228289962,5.66825959038028,14.8730588760623,16.4176357595341,7.72269235274761,3.47741269257943,4.129014459926,3.29672923681077,3.21552568618599,4.01257683228291,24.2843292325339,16.1113832777512,18.9055519435001,21.3097946106173,13.0165678756422,26.4387864086395,6.75022500231806,14.4102785031751,8.60970577069989,18.1216109113137,2.69847103718859,1.19707462020309,1.87806966329548,4.132814190161,0.209613162627982,0,7.11189528965169,7.62329711783909,4.1719497246936,4.54854981174835,6.33698249725599,9.05406438653166,9.92599979180754,7.04276676453562,6.26046611616185,8.09699275181225,6.83717523074647,8.29509647993932,8.24171801606613,6.47675248591348,19.8864166383541,17.2151531974557,12.1602456873134,9.59286349773368,6.7758753899038,8.79991922073436,11.7073902638574,14.994973551957,9.64209208305619,8.97827634652382,6.28765596058123,10.4414751318097,12.2769312950907,5.57772628269478,4.43685205256625,3.74715866906919,5.6143586026898,2.79332370262788,7.65153328275374,5.51478547798789,11.1296561097802 | |||
|short_description=p3@uc012hdm.1 | |||
}} |
Latest revision as of 20:44, 5 August 2015
Short description: | p3@uc012hdm.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_uc012hdm.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:89 |
Association with transcript: | 462bp_to_uc012hdm.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.94e-08 | 18 |
heart | 4.94e-08 | 18 |
primitive heart tube | 4.94e-08 | 18 |
primary heart field | 4.94e-08 | 18 |
anterior lateral plate mesoderm | 4.94e-08 | 18 |
heart tube | 4.94e-08 | 18 |
heart primordium | 4.94e-08 | 18 |
cardiac mesoderm | 4.94e-08 | 18 |
cardiogenic plate | 4.94e-08 | 18 |
heart rudiment | 4.94e-08 | 18 |
epithelial tube | 3.69e-07 | 47 |
embryo | 4.15e-07 | 320 |
compound organ | 8.41e-07 | 43 |