FFCP PHASE1:Mm9::chr3:107746281..107746297,-: Difference between revisions
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{{FFCP|EntrezGene=14867|HGNC=|MCL_coexpression_id=77|UniProt=D3YVP8|association_with_transcript=-1bp_to_ENSMUST00000106683_5end|description=CAGE_peak_5_at_Gstm6_5end|id=chr3:107746281..107746297,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!7.06e-36!18;UBERON:0005564!7.06e-36!18;UBERON:0004176!1.10e-33!17;UBERON:0009196!1.10e-33!17;UBERON:0009117!1.10e-33!17;UBERON:0003135!8.65e-30!15;UBERON:0003133!4.40e-29!24;UBERON:0000473!9.77e-28!14;UBERON:0003101!1.05e-27!16;UBERON:0000079!1.05e-27!16;UBERON:0005156!1.74e-26!26;UBERON:0000990!1.74e-26!26;UBERON:0003886!1.17e-16!38;UBERON:0002553!4.10e-16!39;UBERON:0002323!3.32e-15!37;UBERON:0004458!3.32e-15!37;UBERON:0000464!7.47e-11!57;UBERON:0000466!1.59e-09!79;UBERON:0000992!2.52e-07!3;UBERON:0001301!4.37e-07!3;UBERON:0006555!4.37e-07!3;UBERON:0005103!4.37e-07!3;UBERON:0000083!4.37e-07!3;UBERON:0009201!4.37e-07!3;UBERON:0004819!4.37e-07!3;UBERON:0006553!4.37e-07!3;UBERON:0003074!4.37e-07!3;UBERON:0003060!4.37e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000991,8.63e-53,18;UBERON:0005564,8.63e-53,18;UBERON:0004176,2.35e-48,17;UBERON:0009196,2.35e-48,17;UBERON:0009117,2.35e-48,17;UBERON:0003135,6.94e-47,15;UBERON:0003133,8.73e-45,24;UBERON:0003101,7.41e-44,16;UBERON:0000079,7.41e-44,16;UBERON:0000473,1.20e-42,14;UBERON:0005156,3.43e-41,26;UBERON:0000990,3.43e-41,26;UBERON:0003886,1.49e-27,38;UBERON:0002553,8.52e-27,39;UBERON:0002323,1.04e-24,37;UBERON:0004458,1.04e-24,37;UBERON:0000992,2.99e-07,3;UBERON:0000926,3.32e-07,120;UBERON:0004120,3.32e-07,120;UBERON:0006603,3.32e-07,120|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.470354828542819,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7864797354589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.65209391491899,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51156378930677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,3.38324646967785,1.14020871547503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89170114157866,10.1671251309906,8.10746603239778,6.41688921535357,3.48731523389874,8.95467465101124,5.75050469364194,17.1869787994014,20.9718688851422,7.00593950395418,3.16833006883652,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Gstm6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14867 | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YVP8 | |||
|association_with_transcript=-1bp_to_ENSMUST00000106683_5end | |||
|cluster_id=chr3:107746281..107746297,- | |||
|description=CAGE_peak_5_at_Gstm6_5end | |||
|id=chr3:107746281..107746297,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!7.06e-36!18;UBERON:0005564!7.06e-36!18;UBERON:0004176!1.10e-33!17;UBERON:0009196!1.10e-33!17;UBERON:0009117!1.10e-33!17;UBERON:0003135!8.65e-30!15;UBERON:0003133!4.40e-29!24;UBERON:0000473!9.77e-28!14;UBERON:0003101!1.05e-27!16;UBERON:0000079!1.05e-27!16;UBERON:0005156!1.74e-26!26;UBERON:0000990!1.74e-26!26;UBERON:0003886!1.17e-16!38;UBERON:0002553!4.10e-16!39;UBERON:0002323!3.32e-15!37;UBERON:0004458!3.32e-15!37;UBERON:0000464!7.47e-11!57;UBERON:0000466!1.59e-09!79;UBERON:0000992!2.52e-07!3;UBERON:0001301!4.37e-07!3;UBERON:0006555!4.37e-07!3;UBERON:0005103!4.37e-07!3;UBERON:0000083!4.37e-07!3;UBERON:0009201!4.37e-07!3;UBERON:0004819!4.37e-07!3;UBERON:0006553!4.37e-07!3;UBERON:0003074!4.37e-07!3;UBERON:0003060!4.37e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,8.63e-53,18;UBERON:0005564,8.63e-53,18;UBERON:0004176,2.35e-48,17;UBERON:0009196,2.35e-48,17;UBERON:0009117,2.35e-48,17;UBERON:0003135,6.94e-47,15;UBERON:0003133,8.73e-45,24;UBERON:0003101,7.41e-44,16;UBERON:0000079,7.41e-44,16;UBERON:0000473,1.20e-42,14;UBERON:0005156,3.43e-41,26;UBERON:0000990,3.43e-41,26;UBERON:0003886,1.49e-27,38;UBERON:0002553,8.52e-27,39;UBERON:0002323,1.04e-24,37;UBERON:0004458,1.04e-24,37;UBERON:0000992,2.99e-07,3;UBERON:0000926,3.32e-07,120;UBERON:0004120,3.32e-07,120;UBERON:0006603,3.32e-07,120 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.470354828542819,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7864797354589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.65209391491899,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51156378930677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,3.38324646967785,1.14020871547503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89170114157866,10.1671251309906,8.10746603239778,6.41688921535357,3.48731523389874,8.95467465101124,5.75050469364194,17.1869787994014,20.9718688851422,7.00593950395418,3.16833006883652,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Gstm6 | |||
}} |
Revision as of 20:40, 5 August 2015
Short description: | p5@Gstm6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gstm6_5end |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | -1bp_to_ENSMUST00000106683_5end |
EntrezGene: | 14867 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 8.63e-53 | 18 |
gonad primordium | 8.63e-53 | 18 |
external genitalia | 2.35e-48 | 17 |
indifferent external genitalia | 2.35e-48 | 17 |
indifferent gonad | 2.35e-48 | 17 |
male reproductive organ | 6.94e-47 | 15 |
reproductive organ | 8.73e-45 | 24 |
male organism | 7.41e-44 | 16 |
male reproductive system | 7.41e-44 | 16 |
testis | 1.20e-42 | 14 |
reproductive structure | 3.43e-41 | 26 |
reproductive system | 3.43e-41 | 26 |
body cavity precursor | 1.49e-27 | 38 |
anatomical cavity | 8.52e-27 | 39 |
body cavity | 1.04e-24 | 37 |
body cavity or lining | 1.04e-24 | 37 |
female gonad | 2.99e-07 | 3 |
mesoderm | 3.32e-07 | 120 |
mesoderm-derived structure | 3.32e-07 | 120 |
presumptive mesoderm | 3.32e-07 | 120 |