Personal tools

FFCP PHASE1:Mm9::chrM:12952..12974,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=89
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chrM:12952..12974,+
|description=CAGE_peak_at_chrM:12952..12974,+
|description=CAGE_peak_at_chrM:12952..12974,+
|id=chrM:12952..12974,+
|id=chrM:12952..12974,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000481!4.27e-11!230;UBERON:0000468!6.59e-09!333;UBERON:0003914!9.63e-09!47;UBERON:0000062!3.11e-08!269;UBERON:0000025!3.53e-08!114;UBERON:0000480!5.95e-08!308;UBERON:0000467!5.95e-08!308;UBERON:0004111!2.33e-07!122;UBERON:0000922!2.59e-07!328;UBERON:0007100!2.64e-07!18;UBERON:0000948!2.64e-07!18;UBERON:0005498!2.64e-07!18;UBERON:0004140!2.64e-07!18;UBERON:0009881!2.64e-07!18;UBERON:0004141!2.64e-07!18;UBERON:0003084!2.64e-07!18;UBERON:0007005!2.64e-07!18;UBERON:0004139!2.64e-07!18;UBERON:0004291!2.64e-07!18;UBERON:0000923!4.19e-07!314;UBERON:0005291!4.19e-07!314;UBERON:0006598!4.19e-07!314;UBERON:0002532!4.19e-07!314;UBERON:0005172!4.88e-07!49;UBERON:0005173!4.88e-07!49;UBERON:0002417!4.88e-07!49;UBERON:0000916!4.88e-07!49;UBERON:0003103!5.41e-07!43;UBERON:0002050!9.95e-07!317;UBERON:0005423!9.95e-07!317
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.01e-08,47;UBERON:0000025,3.77e-08,114;UBERON:0004111,2.48e-07,122;UBERON:0007100,2.60e-07,18;UBERON:0000948,2.60e-07,18;UBERON:0005498,2.60e-07,18;UBERON:0004140,2.60e-07,18;UBERON:0009881,2.60e-07,18;UBERON:0004141,2.60e-07,18;UBERON:0003084,2.60e-07,18;UBERON:0007005,2.60e-07,18;UBERON:0004139,2.60e-07,18;UBERON:0004291,2.60e-07,18;UBERON:0005172,5.10e-07,49;UBERON:0005173,5.10e-07,49;UBERON:0002417,5.10e-07,49;UBERON:0000916,5.10e-07,49;UBERON:0003103,5.32e-07,43;UBERON:0005177,7.20e-07,79
|phase1_expression=2.40223270657191,2.09385244583617,3.18499467572675,3.62957053568196,2.50447864973174,0.671517087647559,1.40167584357315,1.29123323441576,4.22366166455,3.7450324211519,1.36974374580404,1.27635454392538,2.05440875917447,1.39872643870396,0.666219523631325,1.41732687172878,1.39912375625629,4.88966356305268,3.83920414096069,2.97072756258621,6.88850650223665,2.97872853602656,2.61199789138935,6.39969691173627,5.50582274561208,2.8711598205751,2.15380998079537,1.939241094173,4.18051522804023,1.51218077855958,1.10865255327652,0,0,0,1.44425809875637,1.66234645358492,1.63335485009895,0,0.7813353445238,1.57057123192139,0.588231488031014,0,0.971020706062307,3.02152363141385,2.43304634926835,6.79122982998222,0,0,0.219686182734472,0.194429899074283,0,0,2.34895648480831,1.45072428402269,2.68875039313971,6.17422646486273,8.02293631828519,5.67239301505187,0.606949382578793,0,0,0.338844532069132,0,0.449949858640699,0,0.7104801149461,2.99600110518405,0.768436610643109,2.69592992002042,1.89008313664367,2.10324961351382,1.99955689082663,2.87129103237098,0.857435594504678,1.62937300731002,0,11.0115880999389,16.4716666129892,25.4986845205364,0.791317726381163,1.28082701043374,2.6045668527838,3.35019598801657,9.00420176050688,22.0029476798607,25.0434297652618,6.69146899755784,2.23679334990361,1.74170244666323,2.87171928405785,0.579728977403356,5.16254326188832,10.1995700056163,71.2408212961919,43.5350199689938,21.0572636935748,2.52799956237153,3.06774580640504,1.55871602761721,1.7666978725517,2.67602497575693,3.84979432242953,0,0,3.24736561516821,3.80039798212648,3.53867111510348,16.2141109201065,2.84831672011889,6.38301197978747,6.59244241711316,20.0947215686013,13.8369298353635,18.8403300690778,28.691644541112,19.35265506477,2.22475470960936,27.763076528623,0.884610551949874,12.7795811458453,24.2925670306433,49.4572758197927,0,12.8823550685081,10.0534419270458,9.96282515313506,2.39630249011841,0,3.17675567682662,10.9347166765521,7.77751024791665,10.0523481690292,8.51739168942155,14.8314965251592,11.4283424507758,9.40999325792994,9.67473956578005,6.84238338355512,5.81262344397452,14.5204880561667,9.49879233627737,2.06911893990126,3.06105620669094,11.0014517020072,5.78310242786287,11.914575986491,3.37326208415024,25.0942269616845,3.66465587985832,3.59301552318857,2.46331573829528,4.82230611340665,3.61461423993277,4.87553033131033,3.70407845534298,6.96619933864726,0.702213187313235,0.257347907114715,2.27330799516474,5.17814431338755,14.7751417788091,16.9258337773354,8.52281048106757,14.1670246858131,32.3960937063494,52.0876036240914,27.3638869427612,71.1100935016062,50.0261943736981,182.718387520033,78.7178140690259,75.2929935240461,140.512073786272,67.7742414739877,9.67333763394985,12.657267322652,14.5384264512871,7.40461586657924,6.82522401712749,12.5407802804637,2.83508414908605,5.84882221407693,6.89371935919098,4.1849637744763,8.54152310780121,14.3288090609889,19.3528110776208,15.3196483471686,10.3330966173134,16.178749355776,25.0720137854645,12.5459002150251,1.89667900953082,12.5673363870702,4.50830942692322,14.255592949172,12.8008641530633,20.1289803085214,19.8562726570168,56.0918562322488,104.247155286673,30.7258938165283,12.1545577105731,3.33690211432188,1.76903095601883,7.42044970870017,2.23146133527353,1.92941727801933,5.60176873919124,4.89083433666378,37.4532373850332,52.7157913321116,403.988660341866,36.4698128715133,61.1593839304539,47.484829054057,27.9859965094183,59.8229966490575,5.72734889516475,1.89491411770485,3.42226450528254,8.82674446030978,9.38760993154008,2.1775813467436,2.85652369063216,6.82967767502296,6.62067605246002,17.717175171902,10.5240147313941,18.8442811923099,24.3485824430913,8.38964539772767,0,0.54390568381871,6.39293554924747,4.13905119457099,12.0412942490844,11.7211686592203,13.4426655208874,29.791569410116,3.47059041357882,0.780877488593277,11.2020166821055,4.54040716109849,4.23317480756549,2.54768877709949,6.47697122679831,8.18316402151673,3.55759000151871,13.1741739732941,2.12910127812403,4.98583690268315,6.67836533349662,3.13443233647817,0,12.1390318077491,6.04647113929502,16.0314317792513,5.31543407185391,2.76691633149535,7.75284879504663,7.27067458955011,9.9819265947722,16.1178746547266,9.48767477174989,13.4076206222643,7.14923172082955,5.40183282093931,6.07985813778946,5.14408884075822,4.96552654198366,12.664186049747,11.0247843803421,10.0473433207818,3.75474732901937,2.54198485036584,2.42581237860458,5.7710188529518,7.42736362801165,4.88534691918062,6.44610657616937,8.53532678674319,21.569581910609,15.9465759729038,2.39219233116994,4.74689796315412,6.2966139305702,16.1996873024034,11.072232445403,5.94823250336959,2.03974115992626,1.11961161858926,1.52019971184866,47.7335309007557,2.84702394223022,4.06638934253697,9.82848601478391,13.7998275369549,9.82631536857799,16.4534502589481,9.83576123131498,15.7053565190418,11.6653475962614,4.97071450469541,1.69107881605257,2.24274819065968,2.64733584731356,4.083474955225,8.39538852605252,14.8681390431885,15.9605844558225,8.33308063001281,5.03324853243412,17.1524725786464,7.77681016896237,1.58005560314089,4.86540516696394,9.86025188782342,7.40548690973432,3.40150721768215,5.36439657909415,6.85114062263822,5.31682297828478,6.3608863467333,6.78240579229499,9.07435666231565,9.35595655101623,6.5424052315424,8.6488907614361,12.4701710988366,2.44184548711471,4.03712354742641,2.68615386182526,4.056981474676,7.88266396894964,4.39563898241436,6.00231461421384,4.01257683228291,20.8958181768315,16.1113832777512,32.0821487526062,30.9335728218638,11.6464028361009,21.9064230243013,10.1253375034771,16.6618845192962,19.0319811773366,13.4617681055473,1.3492355185943,0,2.39027048055788,8.0225216632537,0.419226325255965,0.367687016900028,9.77885602327107,7.82933217507798,7.06022261101994,5.30664144703975,7.60437899670719,5.28153755881013,11.0496978814461,7.17081706934536,6.54764346093991,1.90517476513229,3.47652977834566,5.98018583437486,2.88460130562315,1.03039244094078,10.9718160763333,9.76116933876356,9.53744759789284,2.90692833264657,1.88218760830661,6.93839784711747,5.85369513192872,5.26139422875686,10.4569167661314,0,3.91495559809775,11.2295109908142,1.63692417267876,4.02835787083512,3.2794123866794,4.24677982494508,2.57324769289949,2.57845264857958,7.46024495068489,6.61774257358547,8.57910991795559
|phase1_expression=2.40223270657191,2.09385244583617,3.18499467572675,3.62957053568196,2.50447864973174,0.671517087647559,1.40167584357315,1.29123323441576,4.22366166455,3.7450324211519,1.36974374580404,1.27635454392538,2.05440875917447,1.39872643870396,0.666219523631325,1.41732687172878,1.39912375625629,4.88966356305268,3.83920414096069,2.97072756258621,6.88850650223665,2.97872853602656,2.61199789138935,6.39969691173627,5.50582274561208,2.8711598205751,2.15380998079537,1.939241094173,4.18051522804023,1.51218077855958,1.10865255327652,0,0,0,1.44425809875637,1.66234645358492,1.63335485009895,0,0.7813353445238,1.57057123192139,0.588231488031014,0,0.971020706062307,3.02152363141385,2.43304634926835,6.79122982998222,0,0,0.219686182734472,0.194429899074283,0,0,2.34895648480831,1.45072428402269,2.68875039313971,6.17422646486273,8.02293631828519,5.67239301505187,0.606949382578793,0,0,0.338844532069132,0,0.449949858640699,0,0.7104801149461,2.99600110518405,0.768436610643109,2.69592992002042,1.89008313664367,2.10324961351382,1.99955689082663,2.87129103237098,0.857435594504678,1.62937300731002,0,11.0115880999389,16.4716666129892,25.4986845205364,0.791317726381163,1.28082701043374,2.6045668527838,3.35019598801657,9.00420176050688,22.0029476798607,25.0434297652618,6.69146899755784,2.23679334990361,1.74170244666323,2.87171928405785,0.579728977403356,5.16254326188832,10.1995700056163,71.2408212961919,43.5350199689938,21.0572636935748,2.52799956237153,3.06774580640504,1.55871602761721,1.7666978725517,2.67602497575693,3.84979432242953,0,0,3.24736561516821,3.80039798212648,3.53867111510348,16.2141109201065,2.84831672011889,6.38301197978747,6.59244241711316,20.0947215686013,13.8369298353635,18.8403300690778,28.691644541112,19.35265506477,2.22475470960936,27.763076528623,0.884610551949874,12.7795811458453,24.2925670306433,49.4572758197927,0,12.8823550685081,10.0534419270458,9.96282515313506,2.39630249011841,0,3.17675567682662,10.9347166765521,7.77751024791665,10.0523481690292,8.51739168942155,14.8314965251592,11.4283424507758,9.40999325792994,9.67473956578005,6.84238338355512,5.81262344397452,14.5204880561667,9.49879233627737,2.06911893990126,3.06105620669094,11.0014517020072,5.78310242786287,11.914575986491,3.37326208415024,25.0942269616845,3.66465587985832,3.59301552318857,2.46331573829528,4.82230611340665,3.61461423993277,4.87553033131033,3.70407845534298,6.96619933864726,0.702213187313235,0.257347907114715,2.27330799516474,5.17814431338755,14.7751417788091,16.9258337773354,8.52281048106757,14.1670246858131,32.3960937063494,52.0876036240914,27.3638869427612,71.1100935016062,50.0261943736981,182.718387520033,78.7178140690259,75.2929935240461,140.512073786272,67.7742414739877,9.67333763394985,12.657267322652,14.5384264512871,7.40461586657924,6.82522401712749,12.5407802804637,2.83508414908605,5.84882221407693,6.89371935919098,4.1849637744763,8.54152310780121,14.3288090609889,19.3528110776208,15.3196483471686,10.3330966173134,16.178749355776,25.0720137854645,12.5459002150251,1.89667900953082,12.5673363870702,4.50830942692322,14.255592949172,12.8008641530633,20.1289803085214,19.8562726570168,56.0918562322488,104.247155286673,30.7258938165283,12.1545577105731,3.33690211432188,1.76903095601883,7.42044970870017,2.23146133527353,1.92941727801933,5.60176873919124,4.89083433666378,37.4532373850332,52.7157913321116,403.988660341866,36.4698128715133,61.1593839304539,47.484829054057,27.9859965094183,59.8229966490575,5.72734889516475,1.89491411770485,3.42226450528254,8.82674446030978,9.38760993154008,2.1775813467436,2.85652369063216,6.82967767502296,6.62067605246002,17.717175171902,10.5240147313941,18.8442811923099,24.3485824430913,8.38964539772767,0,0.54390568381871,6.39293554924747,4.13905119457099,12.0412942490844,11.7211686592203,13.4426655208874,29.791569410116,3.47059041357882,0.780877488593277,11.2020166821055,4.54040716109849,4.23317480756549,2.54768877709949,6.47697122679831,8.18316402151673,3.55759000151871,13.1741739732941,2.12910127812403,4.98583690268315,6.67836533349662,3.13443233647817,0,12.1390318077491,6.04647113929502,16.0314317792513,5.31543407185391,2.76691633149535,7.75284879504663,7.27067458955011,9.9819265947722,16.1178746547266,9.48767477174989,13.4076206222643,7.14923172082955,5.40183282093931,6.07985813778946,5.14408884075822,4.96552654198366,12.664186049747,11.0247843803421,10.0473433207818,3.75474732901937,2.54198485036584,2.42581237860458,5.7710188529518,7.42736362801165,4.88534691918062,6.44610657616937,8.53532678674319,21.569581910609,15.9465759729038,2.39219233116994,4.74689796315412,6.2966139305702,16.1996873024034,11.072232445403,5.94823250336959,2.03974115992626,1.11961161858926,1.52019971184866,47.7335309007557,2.84702394223022,4.06638934253697,9.82848601478391,13.7998275369549,9.82631536857799,16.4534502589481,9.83576123131498,15.7053565190418,11.6653475962614,4.97071450469541,1.69107881605257,2.24274819065968,2.64733584731356,4.083474955225,8.39538852605252,14.8681390431885,15.9605844558225,8.33308063001281,5.03324853243412,17.1524725786464,7.77681016896237,1.58005560314089,4.86540516696394,9.86025188782342,7.40548690973432,3.40150721768215,5.36439657909415,6.85114062263822,5.31682297828478,6.3608863467333,6.78240579229499,9.07435666231565,9.35595655101623,6.5424052315424,8.6488907614361,12.4701710988366,2.44184548711471,4.03712354742641,2.68615386182526,4.056981474676,7.88266396894964,4.39563898241436,6.00231461421384,4.01257683228291,20.8958181768315,16.1113832777512,32.0821487526062,30.9335728218638,11.6464028361009,21.9064230243013,10.1253375034771,16.6618845192962,19.0319811773366,13.4617681055473,1.3492355185943,0,2.39027048055788,8.0225216632537,0.419226325255965,0.367687016900028,9.77885602327107,7.82933217507798,7.06022261101994,5.30664144703975,7.60437899670719,5.28153755881013,11.0496978814461,7.17081706934536,6.54764346093991,1.90517476513229,3.47652977834566,5.98018583437486,2.88460130562315,1.03039244094078,10.9718160763333,9.76116933876356,9.53744759789284,2.90692833264657,1.88218760830661,6.93839784711747,5.85369513192872,5.26139422875686,10.4569167661314,0,3.91495559809775,11.2295109908142,1.63692417267876,4.02835787083512,3.2794123866794,4.24677982494508,2.57324769289949,2.57845264857958,7.46024495068489,6.61774257358547,8.57910991795559
|short_description=p@chrM:12952..12974,+
|short_description=p@chrM:12952..12974,+
}}
}}

Latest revision as of 20:38, 5 August 2015

Short description:p@chrM:12952..12974, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrM:12952..12974, +
Coexpression cluster:MCL_coexpression_mm9:89
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chrM:12952..12974+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.04
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C871.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F443.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.21
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D620.09
adrenal gland, embryo E17.CNhs11043.1263-45I113.84
adrenal gland, embryo E18.CNhs11026.1262-18F518.84
adrenal gland, neonate N00.CNhs11191.1311-23C128.69
adrenal gland, neonate N25.CNhs11223.1377-27I319.35
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H127.76
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F512.78
bone (os femoris), neonate N16.CNhs11225.1525-43A624.29
bone (os femoris), neonate N20.CNhs11195.1350-25C349.46
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H79.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F110.05
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F214.83
diencephalon, adult.CNhs10482.20-12F211.43
diencephalon, neonate N30.CNhs11201.1388-42B29.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C69.50
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D411.00
eyeball, neonate N00.CNhs11207.633-15C65.78
eyeball, neonate N01.CNhs11140.1532-43E711.91
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A225.09
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F514.78
heart, embryo E13.CNhs11013.376-3I916.93
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C814.17
heart, embryo E16.CNhs11021.457-17C632.40
heart, embryo E17.CNhs11025.479-18E552.09
heart, embryo E18.CNhs11030.1283-20G327.36
heart, neonate N00.CNhs11213.639-21E371.11
heart, neonate N03.CNhs11221.1349-25I250.03
heart, neonate N10.CNhs11118.749-24G1182.72
heart, neonate N16.CNhs11209.782-15G178.72
heart, neonate N20.CNhs11127.821-26I675.29
heart, neonate N25.CNhs11196.1351-25D3140.51
heart, neonate N30.CNhs11202.1390-42D267.77
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G112.66
intestinal mucosa, adult.CNhs10506.860-29I314.54
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E914.33
intestine, neonate N06.CNhs11102.688-20B819.35
intestine, neonate N07.CNhs11095.720-20F215.32
intestine, neonate N10.CNhs11098.755-23A510.33
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E325.07
intestine, neonate N30.CNhs11131.1384-42G112.55
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F812.57
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I214.26
kidney, embryo E18.CNhs11001.1288-20C712.80
kidney, neonate N00.CNhs11214.646-21G720.13
kidney, neonate N10.CNhs11206.758-6D519.86
kidney, neonate N20.CNhs11113.832-19I156.09
kidney, neonate N25.CNhs11122.1353-25F3104.25
kidney, neonate N30.CNhs11203.1385-42H130.73
liver, adult pregnant day01.CNhs10466.508-5B212.15
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E17.42
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F437.45
liver, neonate N03.CNhs11123.1345-25G252.72
liver, neonate N06.CNhs11101.684-20A8403.99
liver, neonate N07.CNhs11103.716-20H236.47
liver, neonate N10.CNhs11115.751-24B961.16
liver, neonate N20.CNhs11220.823-25A347.48
liver, neonate N25.CNhs11198.1368-26H127.99
liver, neonate N30.CNhs11106.1382-42D159.82
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C58.83
lung, embryo E16.CNhs10998.458-17B69.39
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E56.62
lung, neonate N07.CNhs11111.715-19A317.72
lung, neonate N10.CNhs11219.750-23E610.52
lung, neonate N20.CNhs11109.822-18A418.84
lung, neonate N25.CNhs11119.1359-25C724.35
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A311.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E516.03
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B616.12
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C76.08
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F612.66
pituitary gland, embryo E17.CNhs11039.1265-44F511.02
pituitary gland, neonate N00.CNhs11190.1308-22E910.05
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H34.89
skin, neonate N06.CNhs11097.693-20I56.45
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I121.57
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D116.20
spleen, neonate N20.CNhs11112.824-19H111.07
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H647.73
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D49.83
stomach, embryo E17.CNhs11006.1035-18D513.80
stomach, embryo E18.CNhs10999.1286-20C69.83
stomach, neonate N03.CNhs11193.1340-24B816.45
stomach, neonate N07.CNhs11210.718-18A99.84
stomach, neonate N25.CNhs11104.1355-25E415.71
stomach, neonate N30.CNhs11134.1386-42I111.67
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I58.40
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B715.96
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H317.15
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I29.86
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C75.32
thymus, neonate N06.CNhs11197.681-26C46.36
thymus, neonate N07.CNhs11211.713-19D36.78
thymus, neonate N10.CNhs11194.748-24E49.07
thymus, neonate N20.CNhs11186.820-7A29.36
thymus, neonate N25.CNhs11125.1362-25G76.54
thymus, neonate N30.CNhs11132.1393-42G28.65
tongue, adult.CNhs10499.32-1B412.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.76
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube1.01e-0847
tube3.77e-08114
anatomical conduit2.48e-07122
primary circulatory organ2.60e-0718
heart2.60e-0718
primitive heart tube2.60e-0718
primary heart field2.60e-0718
anterior lateral plate mesoderm2.60e-0718
heart tube2.60e-0718
heart primordium2.60e-0718
cardiac mesoderm2.60e-0718
cardiogenic plate2.60e-0718
heart rudiment2.60e-0718
abdomen element5.10e-0749
abdominal segment element5.10e-0749
abdominal segment of trunk5.10e-0749
abdomen5.10e-0749
compound organ5.32e-0743
trunk region element7.20e-0779
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrM:12952..12974,%2B&oldid=3939582"