FFCP PHASE1:Mm9::chr13:24893006..24893027,+: Difference between revisions
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{{FFCP|EntrezGene=79555|HGNC=|MCL_coexpression_id=376|UniProt=Q99LU8,Q3TVJ4|association_with_transcript=-498bp_to_ENSMUST00000019276,NM_024473,uc007pwi.1_5end|description=CAGE_peak_2_at_BC005537_5end|id=chr13:24893006..24893027,+|ontology_enrichment_celltype=CL:0000117!1.33e-12!23;CL:0000337!1.33e-12!23;CL:0000540!6.61e-10!33;CL:0000047!6.61e-10!33;CL:0000031!6.61e-10!33;CL:0000404!6.61e-10!33;CL:0000393!1.38e-08!39;CL:0000211!1.38e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-12,23;CL:0000337,1.33e-12,23;CL:0000540,6.60e-10,33;CL:0000047,6.60e-10,33;CL:0000031,6.60e-10,33;CL:0000404,6.60e-10,33;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.00e-19!63;UBERON:0001049!8.67e-18!52;UBERON:0005068!8.67e-18!52;UBERON:0006241!8.67e-18!52;UBERON:0007135!8.67e-18!52;UBERON:0002346!2.19e-17!71;UBERON:0003075!2.19e-17!71;UBERON:0007284!2.19e-17!71;UBERON:0003056!3.73e-17!49;UBERON:0001017!4.50e-17!73;UBERON:0005743!4.50e-17!73;UBERON:0000955!4.69e-17!50;UBERON:0006238!4.69e-17!50;UBERON:0002616!2.09e-16!49;UBERON:0004121!2.41e-16!102;UBERON:0000924!2.41e-16!102;UBERON:0006601!2.41e-16!102;UBERON:0000073!3.99e-16!75;UBERON:0001016!3.99e-16!75;UBERON:0003080!2.25e-14!40;UBERON:0002020!3.97e-14!34;UBERON:0002780!9.16e-14!39;UBERON:0001890!9.16e-14!39;UBERON:0006240!9.16e-14!39;UBERON:0002791!7.87e-12!29;UBERON:0003528!7.87e-12!29;UBERON:0001893!7.87e-12!29;UBERON:0007811!2.77e-10!86;UBERON:0000153!3.62e-10!94;UBERON:0004111!1.49e-08!122;UBERON:0000025!3.32e-08!114;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.77e-20,64;UBERON:0003075,8.77e-20,64;UBERON:0007284,8.77e-20,64;UBERON:0010371,6.50e-19,73;UBERON:0000073,7.68e-19,54;UBERON:0004121,6.41e-18,95;UBERON:0000924,6.41e-18,95;UBERON:0006601,6.41e-18,95;UBERON:0001049,8.67e-18,52;UBERON:0005068,8.67e-18,52;UBERON:0006241,8.67e-18,52;UBERON:0007135,8.67e-18,52;UBERON:0003056,3.73e-17,49;UBERON:0001017,4.50e-17,73;UBERON:0001016,3.99e-16,75;UBERON:0010314,1.20e-15,92;UBERON:0000955,1.97e-15,47;UBERON:0006238,1.97e-15,47;UBERON:0002616,8.50e-15,46;UBERON:0003080,2.25e-14,40;UBERON:0002020,3.97e-14,34;UBERON:0002780,9.16e-14,39;UBERON:0001890,9.16e-14,39;UBERON:0006240,9.16e-14,39;UBERON:0003528,7.87e-12,29;UBERON:0002791,7.87e-12,29;UBERON:0001893,7.87e-12,29;UBERON:0004111,1.49e-08,122;UBERON:0000025,3.32e-08,114;UBERON:0000956,1.02e-07,21;UBERON:0001869,1.02e-07,21;UBERON:0000203,1.02e-07,21|phase1_expression=19.3780104996801,8.72438519098403,7.73498706962211,7.86406949397758,5.50985302940982,8.2260843236826,7.47560449905682,27.115897922731,2.81577444303333,4.21316147379588,6.8487187290202,7.0199499915896,15.2368649638773,22.6418842265203,15.6561588053361,18.8301998672538,37.0767795407918,13.5648731104042,16.4537320326887,10.6097412949508,34.4425325111833,5.16312946244604,3.13439746966722,14.3993180514066,13.0763290208287,7.46501553349526,5.59990595006797,8.61884930743556,11.4014051673824,9.32511480111744,8.86922042621219,3.17515336729816,7.38077745101484,0,4.62162591602039,5.31950865147176,4.49172583777212,16.7412652294763,7.813353445238,11.5175223674236,11.1763982725893,17.7591826089196,22.8189865924642,18.6327290603854,17.2340783073175,13.0318194034794,10.9534788208725,5.45062890951116,9.66619204031676,9.72149495371417,6.7193482380174,10.062679505548,12.4159128482725,13.0565185562042,17.4768775554081,12.8629718017974,17.1920063963254,14.9544906760458,55.4347102755298,46.0222151966669,65.2846345611365,10.165335962074,5.33576877666684,2.6996991518442,2.96659908770092,2.8419204597844,7.49000276296012,8.83702102239575,32.9732967140959,30.5113420629621,27.1319200143283,30.2790043468032,26.7250934551452,43.4842337213087,29.0411777185256,67.1029714225315,39.6417171597799,36.9016407066192,38.4016333140609,61.4590100822703,43.6396059983494,58.3422975023571,36.8521558681823,24.7615548413939,28.7260705820403,41.2480019663135,33.3149733069901,46.4134620104998,11.510381386644,12.318164297406,13.6236309689789,5.16254326188832,0.679971333707751,1.61910957491345,4.54843492213368,1.34408066129201,15.4488862144927,16.3613109674935,12.7295142255406,11.6602059588412,18.7321748302985,19.2489716121477,17.8363667794652,35.5533351576666,6.27824018932521,8.36087556067825,7.58286667522175,14.8439043634778,28.4831672011889,21.2272258862699,10.4091196059682,12.4830846107978,11.761390360059,11.6056433225519,22.2242656486482,12.3153259503082,11.6181634835156,21.1115061103071,15.9229899350977,22.1620584427951,13.6921741445444,18.4252596191384,11.1835056730873,52.99332425909,42.9365748967583,12.7728527604296,2.03685711660064,1.79970819298022,3.04968544975355,47.1840514125192,52.1550687213234,55.4135692817732,43.1084314076846,27.872984849006,43.6354893575076,33.7461827180936,23.0156962301715,16.2973131499222,25.2722758433675,35.9855573565871,14.7036100547855,20.921091503446,23.2280147448901,22.75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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:79555 | |||
|HGNC= | |||
|MCL_coexpression_id=376 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99LU8,uniprot:Q3TVJ4 | |||
|association_with_transcript=-498bp_to_ENSMUST00000019276,NM_024473,uc007pwi.1_5end | |||
|cluster_id=chr13:24893006..24893027,+ | |||
|description=CAGE_peak_2_at_BC005537_5end | |||
|id=chr13:24893006..24893027,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.33e-12!23;CL:0000337!1.33e-12!23;CL:0000540!6.61e-10!33;CL:0000047!6.61e-10!33;CL:0000031!6.61e-10!33;CL:0000404!6.61e-10!33;CL:0000393!1.38e-08!39;CL:0000211!1.38e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-12,23;CL:0000337,1.33e-12,23;CL:0000540,6.60e-10,33;CL:0000047,6.60e-10,33;CL:0000031,6.60e-10,33;CL:0000404,6.60e-10,33;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.00e-19!63;UBERON:0001049!8.67e-18!52;UBERON:0005068!8.67e-18!52;UBERON:0006241!8.67e-18!52;UBERON:0007135!8.67e-18!52;UBERON:0002346!2.19e-17!71;UBERON:0003075!2.19e-17!71;UBERON:0007284!2.19e-17!71;UBERON:0003056!3.73e-17!49;UBERON:0001017!4.50e-17!73;UBERON:0005743!4.50e-17!73;UBERON:0000955!4.69e-17!50;UBERON:0006238!4.69e-17!50;UBERON:0002616!2.09e-16!49;UBERON:0004121!2.41e-16!102;UBERON:0000924!2.41e-16!102;UBERON:0006601!2.41e-16!102;UBERON:0000073!3.99e-16!75;UBERON:0001016!3.99e-16!75;UBERON:0003080!2.25e-14!40;UBERON:0002020!3.97e-14!34;UBERON:0002780!9.16e-14!39;UBERON:0001890!9.16e-14!39;UBERON:0006240!9.16e-14!39;UBERON:0002791!7.87e-12!29;UBERON:0003528!7.87e-12!29;UBERON:0001893!7.87e-12!29;UBERON:0007811!2.77e-10!86;UBERON:0000153!3.62e-10!94;UBERON:0004111!1.49e-08!122;UBERON:0000025!3.32e-08!114;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.77e-20,64;UBERON:0003075,8.77e-20,64;UBERON:0007284,8.77e-20,64;UBERON:0010371,6.50e-19,73;UBERON:0000073,7.68e-19,54;UBERON:0004121,6.41e-18,95;UBERON:0000924,6.41e-18,95;UBERON:0006601,6.41e-18,95;UBERON:0001049,8.67e-18,52;UBERON:0005068,8.67e-18,52;UBERON:0006241,8.67e-18,52;UBERON:0007135,8.67e-18,52;UBERON:0003056,3.73e-17,49;UBERON:0001017,4.50e-17,73;UBERON:0001016,3.99e-16,75;UBERON:0010314,1.20e-15,92;UBERON:0000955,1.97e-15,47;UBERON:0006238,1.97e-15,47;UBERON:0002616,8.50e-15,46;UBERON:0003080,2.25e-14,40;UBERON:0002020,3.97e-14,34;UBERON:0002780,9.16e-14,39;UBERON:0001890,9.16e-14,39;UBERON:0006240,9.16e-14,39;UBERON:0003528,7.87e-12,29;UBERON:0002791,7.87e-12,29;UBERON:0001893,7.87e-12,29;UBERON:0004111,1.49e-08,122;UBERON:0000025,3.32e-08,114;UBERON:0000956,1.02e-07,21;UBERON:0001869,1.02e-07,21;UBERON:0000203,1.02e-07,21 | |||
|phase1_expression=19.3780104996801,8.72438519098403,7.73498706962211,7.86406949397758,5.50985302940982,8.2260843236826,7.47560449905682,27.115897922731,2.81577444303333,4.21316147379588,6.8487187290202,7.0199499915896,15.2368649638773,22.6418842265203,15.6561588053361,18.8301998672538,37.0767795407918,13.5648731104042,16.4537320326887,10.6097412949508,34.4425325111833,5.16312946244604,3.13439746966722,14.3993180514066,13.0763290208287,7.46501553349526,5.59990595006797,8.61884930743556,11.4014051673824,9.32511480111744,8.86922042621219,3.17515336729816,7.38077745101484,0,4.62162591602039,5.31950865147176,4.49172583777212,16.7412652294763,7.813353445238,11.5175223674236,11.1763982725893,17.7591826089196,22.8189865924642,18.6327290603854,17.2340783073175,13.0318194034794,10.9534788208725,5.45062890951116,9.66619204031676,9.72149495371417,6.7193482380174,10.062679505548,12.4159128482725,13.0565185562042,17.4768775554081,12.8629718017974,17.1920063963254,14.9544906760458,55.4347102755298,46.0222151966669,65.2846345611365,10.165335962074,5.33576877666684,2.6996991518442,2.96659908770092,2.8419204597844,7.49000276296012,8.83702102239575,32.9732967140959,30.5113420629621,27.1319200143283,30.2790043468032,26.7250934551452,43.4842337213087,29.0411777185256,67.1029714225315,39.6417171597799,36.9016407066192,38.4016333140609,61.4590100822703,43.6396059983494,58.3422975023571,36.8521558681823,24.7615548413939,28.7260705820403,41.2480019663135,33.3149733069901,46.4134620104998,11.510381386644,12.318164297406,13.6236309689789,5.16254326188832,0.679971333707751,1.61910957491345,4.54843492213368,1.34408066129201,15.4488862144927,16.3613109674935,12.7295142255406,11.6602059588412,18.7321748302985,19.2489716121477,17.8363667794652,35.5533351576666,6.27824018932521,8.36087556067825,7.58286667522175,14.8439043634778,28.4831672011889,21.2272258862699,10.4091196059682,12.4830846107978,11.761390360059,11.6056433225519,22.2242656486482,12.3153259503082,11.6181634835156,21.1115061103071,15.9229899350977,22.1620584427951,13.6921741445444,18.4252596191384,11.1835056730873,52.99332425909,42.9365748967583,12.7728527604296,2.03685711660064,1.79970819298022,3.04968544975355,47.1840514125192,52.1550687213234,55.4135692817732,43.1084314076846,27.872984849006,43.6354893575076,33.7461827180936,23.0156962301715,16.2973131499222,25.2722758433675,35.9855573565871,14.7036100547855,20.921091503446,23.2280147448901,22.756427493193,37.0118555383224,33.5657947146306,34.9507432607789,47.6014202159789,10.993967639575,15.1284864134255,17.067259043903,15.3437012699302,16.9608822027615,24.3776516565517,15.4336602305958,14.7285357445685,0.702213187313235,2.31613116403244,1.98914449576915,14.0845525324141,16.1822981386956,16.0255234700303,19.176323582402,13.7734962223183,15.8895126274,17.9051137457814,10.9992094573844,21.9518843650279,15.9623054416076,19.3717607613332,20.4293400055556,17.3977985036145,16.6858087621198,12.7496097822353,35.9595812044658,46.4099801830573,9.58214470653014,8.19796756656987,12.797295032114,11.147360249301,13.2733485161756,12.9077455758939,14.0098167622268,9.13083005340284,9.01605216934572,10.3760341476127,10.304743560811,13.7279965708394,12.6726656627428,13.4822911298133,12.5360068927323,13.541606581297,17.6391147886366,11.5390997735826,22.5415471346161,16.4957575554705,12.9948166402309,15.0090654565282,10.7502113111237,6.6424566590821,9.73392112616524,10.3653617694312,1.48226313543574,17.685581205906,15.9212786041694,16.1900720917095,20.6917323816273,19.7765270996982,15.786802810448,13.8094145976389,26.7523124178808,6.58947391651396,30.1913233707445,11.9085103253921,6.55279113540577,1.51547326768267,2.69096120282868,3.37710464954357,34.1793401808219,12.3169417650815,12.385338209594,13.5796068620151,12.2038929110021,13.0654880804616,15.7108802984769,18.7328301943487,18.7585821486367,21.9250042752287,20.2507556195009,17.0417847304368,19.5134029508462,23.4331474902049,1.50791283939272,3.80733978673097,10.3270497333998,9.3818493743609,44.793614606594,32.7020605592247,6.72133276044369,14.6433137778536,14.5133780931478,11.3227235846025,20.2497993868831,14.3381278771531,20.7202766896627,20.9476632783736,13.7635638569464,17.2430956167674,15.0209355619679,53.6606598424418,24.9814549966553,17.8065603667255,27.5278961307544,22.2709666012923,31.8588332015911,13.110154352369,8.76738315197778,11.5049098651098,11.8120757152309,17.8312385807478,16.7978390559344,19.6308213917853,14.2598951353889,13.9056173491759,9.48767477174989,11.3449097573006,51.0659408630682,18.006109403131,13.712020480972,17.7899739076222,27.4877362145524,23.0095774706671,27.3151374199521,21.6170113871366,7.97883807416615,11.8625959683739,17.8628002424519,36.6047481530086,32.6158141925729,16.4051155804584,15.0409153443952,17.8913580722117,9.32738677215522,45.8000495965959,21.7006018613273,12.1768252098301,14.8155621895769,20.5321618135113,22.8279360294112,18.7598102029349,6.79913719975421,7.83728133012485,11.4705978257672,15.2747298882418,14.0769517143605,14.6390016331331,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| |||
|short_description=p2@BC005537 | |||
}} |
Revision as of 20:13, 5 August 2015
Short description: | p2@BC005537 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BC005537_5end |
Coexpression cluster: | MCL_coexpression_mm9:376 |
Association with transcript: | -498bp_to_ENSMUST00000019276, NM_024473, uc007pwi.1_5end |
EntrezGene: | 79555 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.33e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-12 | 23 |
neuron | 6.60e-10 | 33 |
neuronal stem cell | 6.60e-10 | 33 |
neuroblast | 6.60e-10 | 33 |
electrically signaling cell | 6.60e-10 | 33 |
electrically responsive cell | 1.38e-08 | 39 |
electrically active cell | 1.38e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.77e-20 | 64 |
neural plate | 8.77e-20 | 64 |
presumptive neural plate | 8.77e-20 | 64 |
ecto-epithelium | 6.50e-19 | 73 |
regional part of nervous system | 7.68e-19 | 54 |
ectoderm-derived structure | 6.41e-18 | 95 |
ectoderm | 6.41e-18 | 95 |
presumptive ectoderm | 6.41e-18 | 95 |
neural tube | 8.67e-18 | 52 |
neural rod | 8.67e-18 | 52 |
future spinal cord | 8.67e-18 | 52 |
neural keel | 8.67e-18 | 52 |
pre-chordal neural plate | 3.73e-17 | 49 |
central nervous system | 4.50e-17 | 73 |
nervous system | 3.99e-16 | 75 |
structure with developmental contribution from neural crest | 1.20e-15 | 92 |
brain | 1.97e-15 | 47 |
future brain | 1.97e-15 | 47 |
regional part of brain | 8.50e-15 | 46 |
anterior neural tube | 2.25e-14 | 40 |
gray matter | 3.97e-14 | 34 |
regional part of forebrain | 9.16e-14 | 39 |
forebrain | 9.16e-14 | 39 |
future forebrain | 9.16e-14 | 39 |
brain grey matter | 7.87e-12 | 29 |
regional part of telencephalon | 7.87e-12 | 29 |
telencephalon | 7.87e-12 | 29 |
anatomical conduit | 1.49e-08 | 122 |
tube | 3.32e-08 | 114 |
cerebral cortex | 1.02e-07 | 21 |
cerebral hemisphere | 1.02e-07 | 21 |
pallium | 1.02e-07 | 21 |