Personal tools

FFCP PHASE1:Mm9::chr3:106905498..106905519,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:106905498..106905519,+
|DHSsupport=NA
|short_description=p@chr3:106905498..106905519,+
|DPIdataset=NA
|description=CAGE_peak_at_chr3:106905498..106905519,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2245
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr3:106905498..106905519,+
|description=CAGE_peak_at_chr3:106905498..106905519,+
|id=chr3:106905498..106905519,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.66e-15!102;UBERON:0000924!5.66e-15!102;UBERON:0006601!5.66e-15!102;UBERON:0001017!1.26e-13!73;UBERON:0005743!1.26e-13!73;UBERON:0000073!1.29e-13!75;UBERON:0001016!1.29e-13!75;UBERON:0000033!1.33e-13!63;UBERON:0002346!1.51e-11!71;UBERON:0003075!1.51e-11!71;UBERON:0007284!1.51e-11!71;UBERON:0000955!9.57e-11!50;UBERON:0006238!9.57e-11!50;UBERON:0001049!2.29e-10!52;UBERON:0005068!2.29e-10!52;UBERON:0006241!2.29e-10!52;UBERON:0007135!2.29e-10!52;UBERON:0002616!3.27e-10!49;UBERON:0003056!3.61e-09!49;UBERON:0002020!2.41e-08!34;UBERON:0002021!3.11e-08!10;UBERON:0000411!3.11e-08!10;UBERON:0001950!3.11e-08!10;UBERON:0007811!1.69e-07!86;UBERON:0002791!2.63e-07!29;UBERON:0003528!2.63e-07!29;UBERON:0001893!2.63e-07!29;UBERON:0002048!2.75e-07!14;UBERON:0000117!2.75e-07!14;UBERON:0000171!2.75e-07!14;UBERON:0000170!2.75e-07!14;UBERON:0005597!2.75e-07!14;UBERON:0000118!2.75e-07!14;UBERON:0000153!3.47e-07!94;UBERON:0003080!5.10e-07!40;UBERON:0000956!5.97e-07!21;UBERON:0001869!5.97e-07!21;UBERON:0000203!5.97e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.00e-19,73;UBERON:0000073,2.39e-19,54;UBERON:0001016,6.86e-19,75;UBERON:0004121,1.27e-18,95;UBERON:0000924,1.27e-18,95;UBERON:0006601,1.27e-18,95;UBERON:0002346,2.59e-18,64;UBERON:0003075,2.59e-18,64;UBERON:0007284,2.59e-18,64;UBERON:0001049,1.78e-17,52;UBERON:0005068,1.78e-17,52;UBERON:0006241,1.78e-17,52;UBERON:0007135,1.78e-17,52;UBERON:0010371,6.29e-16,73;UBERON:0002021,8.80e-15,10;UBERON:0000411,8.80e-15,10;UBERON:0001950,8.80e-15,10;UBERON:0000955,1.08e-14,47;UBERON:0006238,1.08e-14,47;UBERON:0002616,9.64e-14,46;UBERON:0002048,9.65e-14,14;UBERON:0000117,9.65e-14,14;UBERON:0000171,9.65e-14,14;UBERON:0000170,9.65e-14,14;UBERON:0005597,9.65e-14,14;UBERON:0000118,9.65e-14,14;UBERON:0002020,2.73e-13,34;UBERON:0003056,7.76e-13,49;UBERON:0004111,4.86e-12,122;UBERON:0000025,5.09e-12,114;UBERON:0003080,9.33e-11,40;UBERON:0003528,9.74e-11,29;UBERON:0002791,9.74e-11,29;UBERON:0001893,9.74e-11,29;UBERON:0002619,1.06e-10,17;UBERON:0005153,1.07e-10,17;UBERON:0005178,1.07e-10,17;UBERON:0005181,1.07e-10,17;UBERON:0002224,1.07e-10,17;UBERON:0000915,1.07e-10,17;UBERON:0008947,1.07e-10,17;UBERON:0003258,1.07e-10,17;UBERON:0010314,1.62e-10,92;UBERON:0002780,6.50e-10,39;UBERON:0001890,6.50e-10,39;UBERON:0006240,6.50e-10,39;UBERON:0000956,9.85e-10,21;UBERON:0001869,9.85e-10,21;UBERON:0000203,9.85e-10,21;UBERON:0005157,1.38e-08,20;UBERON:0003076,3.53e-08,12;UBERON:0003057,3.53e-08,12;UBERON:0011216,1.01e-07,194;UBERON:0000483,5.36e-07,174;UBERON:0000119,8.87e-07,176
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,0,0,0,0.137114433605739,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,1.49800055259202,1.15265491596466,0.414758449233911,0.135005938331691,0.630974884054146,1.14260393761521,1.10434270475807,0.244981598429908,0.383381884072945,0,3.30347642998166,5.49055553766307,2.91852413186863,0.131886287730194,0,0,1.67509799400829,2.25105044012672,1.98637722109853,2.65165726926301,2.56269025438385,0,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.561777680527007,0,0,0,2.53518155598025,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0,0,0.304465478312141,0.230615497256059,0.60289056221049,0.470354828542819,0.125666591329675,0,0.433798070759735,0.884610551949874,0.323533699894818,0,0.969750506270444,0,6.44117753425404,5.02672096352292,0.510914110417183,0,0,0,3.74476598512057,3.66000482254901,0.502617408451458,6.77914848749878,5.11430914660661,4.98691306942944,2.59586020908412,0.305518091550949,0.248813941220186,0,2.10441855886474,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,1.63287597963187,2.69038812598185,1.68663104207512,2.32833033665114,0,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0.324275238183423,0.438599962275997,0,0.536825675041487,4.83666881697493,1.13195073617213,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0,0.596869416123452,0.19496408711912,0,0.432276099749388,0.597423819763102,0,0,1.1270773567308,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.03228509183265,0,1.46668478797823,1.01847051465113,1.87752198630802,5.02518772325447,9.04565835366852,7.61021226645415,2.20689201748667,2.21464689648775,1.91345722388985,3.60499292374624,3.10832967358612,4.19482269886384,0,0,0,0,5.45872005958493,4.92289083687253,0,2.52470927204373,0.315508219416257,0,0.646270193198397,1.67278158566786,1.78238939265915,2.26461224631066,0.404810701674894,0.584511715822624,0.395287777946524,4.17717711348349,0.709700426041343,0,0.488660878060728,0.989820737835213,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,1.36175842301515,0,0,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0.661585194164886,0.8244312647074,0.484393280087717,0.180938774784468,0.119372344003136,0.328281799490123,0.582961673259701,6.67531087237835,0.512612642393558,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.809186078308924,0.826534557253359,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0,0.302899349844443,0.15241361331,0.201652370273681,0.38983152295901,0.0962118416403295,0.584384510907845,0.226730383615211,0,0,0,1.9318959403219,0,0,0,0.501572104035363,6.21227026878773,4.14292712856459,5.72895513439397,5.499301834998,6.16574267793578,3.7769694869485,6.07520250208625,5.40385443869065,4.07828168085784,6.21312374102184,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,1.01078884705519,0,1.32038438970253,0.936415074698824,0.448176066834085,0.516919220600519,0.476293691283074,0.695305955669133,0.77163688185482,0,0.147198920134397,0.685738504770831,1.4198064492747,0.238436189947321,0.436039249896986,0.752875043322645,0.676916863133412,1.09756783723664,1.57841826862706,0.679020569229309,0.561142271657738,0.593175090620871,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.499621155875892,1.16965804222704,0.644613162144895,2.48674831689496,0.882365676478062,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,0,0,0,0.137114433605739,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,1.49800055259202,1.15265491596466,0.414758449233911,0.135005938331691,0.630974884054146,1.14260393761521,1.10434270475807,0.244981598429908,0.383381884072945,0,3.30347642998166,5.49055553766307,2.91852413186863,0.131886287730194,0,0,1.67509799400829,2.25105044012672,1.98637722109853,2.65165726926301,2.56269025438385,0,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.561777680527007,0,0,0,2.53518155598025,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0,0,0.304465478312141,0.230615497256059,0.60289056221049,0.470354828542819,0.125666591329675,0,0.433798070759735,0.884610551949874,0.323533699894818,0,0.969750506270444,0,6.44117753425404,5.02672096352292,0.510914110417183,0,0,0,3.74476598512057,3.66000482254901,0.502617408451458,6.77914848749878,5.11430914660661,4.98691306942944,2.59586020908412,0.305518091550949,0.248813941220186,0,2.10441855886474,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,1.63287597963187,2.69038812598185,1.68663104207512,2.32833033665114,0,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0.324275238183423,0.438599962275997,0,0.536825675041487,4.83666881697493,1.13195073617213,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0,0.596869416123452,0.19496408711912,0,0.432276099749388,0.597423819763102,0,0,1.1270773567308,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.03228509183265,0,1.46668478797823,1.01847051465113,1.87752198630802,5.02518772325447,9.04565835366852,7.61021226645415,2.20689201748667,2.21464689648775,1.91345722388985,3.60499292374624,3.10832967358612,4.19482269886384,0,0,0,0,5.45872005958493,4.92289083687253,0,2.52470927204373,0.315508219416257,0,0.646270193198397,1.67278158566786,1.78238939265915,2.26461224631066,0.404810701674894,0.584511715822624,0.395287777946524,4.17717711348349,0.709700426041343,0,0.488660878060728,0.989820737835213,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,1.36175842301515,0,0,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0.661585194164886,0.8244312647074,0.484393280087717,0.180938774784468,0.119372344003136,0.328281799490123,0.582961673259701,6.67531087237835,0.512612642393558,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.809186078308924,0.826534557253359,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0,0.302899349844443,0.15241361331,0.201652370273681,0.38983152295901,0.0962118416403295,0.584384510907845,0.226730383615211,0,0,0,1.9318959403219,0,0,0,0.501572104035363,6.21227026878773,4.14292712856459,5.72895513439397,5.499301834998,6.16574267793578,3.7769694869485,6.07520250208625,5.40385443869065,4.07828168085784,6.21312374102184,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,1.01078884705519,0,1.32038438970253,0.936415074698824,0.448176066834085,0.516919220600519,0.476293691283074,0.695305955669133,0.77163688185482,0,0.147198920134397,0.685738504770831,1.4198064492747,0.238436189947321,0.436039249896986,0.752875043322645,0.676916863133412,1.09756783723664,1.57841826862706,0.679020569229309,0.561142271657738,0.593175090620871,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.499621155875892,1.16965804222704,0.644613162144895,2.48674831689496,0.882365676478062,0.231867835620421
|short_description=p@chr3:106905498..106905519,+
}}
}}

Latest revision as of 20:00, 5 August 2015

Short description:p@chr3:106905498..106905519, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:106905498..106905519, +
Coexpression cluster:MCL_coexpression_mm9:2245
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr3:106905498..106905519+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I69.05
lung, neonate N00.CNhs11224.640-42C67.61
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.00e-1973
regional part of nervous system2.39e-1954
nervous system6.86e-1975
ectoderm-derived structure1.27e-1895
ectoderm1.27e-1895
presumptive ectoderm1.27e-1895
neurectoderm2.59e-1864
neural plate2.59e-1864
presumptive neural plate2.59e-1864
neural tube1.78e-1752
neural rod1.78e-1752
future spinal cord1.78e-1752
neural keel1.78e-1752
ecto-epithelium6.29e-1673
occipital lobe8.80e-1510
visual cortex8.80e-1510
neocortex8.80e-1510
brain1.08e-1447
future brain1.08e-1447
regional part of brain9.64e-1446
lung9.65e-1414
respiratory tube9.65e-1414
respiration organ9.65e-1414
pair of lungs9.65e-1414
lung primordium9.65e-1414
lung bud9.65e-1414
gray matter2.73e-1334
pre-chordal neural plate7.76e-1349
anatomical conduit4.86e-12122
tube5.09e-12114
anterior neural tube9.33e-1140
brain grey matter9.74e-1129
regional part of telencephalon9.74e-1129
telencephalon9.74e-1129
regional part of cerebral cortex1.06e-1017
epithelial bud1.07e-1017
thoracic cavity element1.07e-1017
thoracic segment organ1.07e-1017
thoracic cavity1.07e-1017
thoracic segment of trunk1.07e-1017
respiratory primordium1.07e-1017
endoderm of foregut1.07e-1017
structure with developmental contribution from neural crest1.62e-1092
regional part of forebrain6.50e-1039
forebrain6.50e-1039
future forebrain6.50e-1039
cerebral cortex9.85e-1021
cerebral hemisphere9.85e-1021
pallium9.85e-1021
epithelial fold1.38e-0820
posterior neural tube3.53e-0812
chordal neural plate3.53e-0812
organ system subdivision1.01e-07194
epithelium5.36e-07174
cell layer8.87e-07176
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:106905498..106905519,%2B&oldid=3936620"