FFCP PHASE1:Mm9::chr13:24420892..24420904,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:24420892..24420904,-
|short_description=p@chr13:24420892..24420904,-
|description=CAGE_peak_at_chr13:24420892..24420904,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=162 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:24420892..24420904,- | |||
|description=CAGE_peak_at_chr13:24420892..24420904,- | |||
|id=chr13:24420892..24420904,- | |||
|ontology_enrichment_celltype=CL:0000181!1.04e-14!5;CL:0000417!1.04e-14!5;CL:0000668!1.04e-14!5;CL:0000412!1.04e-14!5;CL:0000182!1.04e-14!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.57e-26,5;CL:0000057,1.44e-09,1;CL:0000632,1.44e-09,1;CL:0000223,7.27e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.09e-16!22;UBERON:0007499!1.09e-16!22;UBERON:0006925!1.09e-16!22;UBERON:0009497!1.09e-16!22;UBERON:0000015!1.09e-16!22;UBERON:0002423!1.09e-16!22;UBERON:0006235!1.09e-16!22;UBERON:0008835!1.09e-16!22;UBERON:0003894!1.09e-16!22;UBERON:0004161!1.09e-16!22;UBERON:0008836!1.09e-16!22;UBERON:0005172!2.00e-16!49;UBERON:0005173!2.00e-16!49;UBERON:0002417!2.00e-16!49;UBERON:0000916!2.00e-16!49;UBERON:0009854!7.59e-16!23;UBERON:0009856!7.59e-16!23;UBERON:0002365!2.29e-14!25;UBERON:0002330!2.29e-14!25;UBERON:0009569!7.72e-14!66;UBERON:0005256!4.57e-12!47;UBERON:0005177!6.96e-11!85;UBERON:0002100!7.21e-10!98;UBERON:0003914!1.44e-07!47;UBERON:0003104!6.98e-07!131;UBERON:0009142!6.98e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.71e-29,22;UBERON:0007499,5.71e-29,22;UBERON:0006925,5.71e-29,22;UBERON:0009497,5.71e-29,22;UBERON:0000015,5.71e-29,22;UBERON:0002423,5.71e-29,22;UBERON:0006235,5.71e-29,22;UBERON:0008835,5.71e-29,22;UBERON:0003894,5.71e-29,22;UBERON:0004161,5.71e-29,22;UBERON:0008836,5.71e-29,22;UBERON:0009854,1.08e-27,23;UBERON:0009856,1.08e-27,23;UBERON:0002365,1.93e-25,25;UBERON:0002330,1.93e-25,25;UBERON:0005256,6.74e-14,45;UBERON:0003914,2.79e-13,47;UBERON:0005172,1.03e-12,49;UBERON:0005173,1.03e-12,49;UBERON:0002417,1.03e-12,49;UBERON:0000916,1.03e-12,49;UBERON:0003929,2.95e-11,55;UBERON:0002368,2.90e-10,60;UBERON:0003104,4.39e-10,61;UBERON:0009142,4.39e-10,61;UBERON:0002530,2.02e-09,65;UBERON:0000490,2.88e-09,66;UBERON:0009569,2.88e-09,66;UBERON:0005911,7.81e-09,69;UBERON:0000949,1.95e-08,72;UBERON:0005177,1.27e-07,79;UBERON:0001041,1.62e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,39.5794983411438,12.9194553404473,34.5410042648203,85.7704871030923,94.0856462904405,6.03911006566533,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0.517875767294343,0.445326417194474,0,0,0,0,0,0.502666365318702,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.740382983530803,32.9062416066735,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,2.02063102357689,26.9096120282868,2.8946611281802,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,39.5794983411438,12.9194553404473,34.5410042648203,85.7704871030923,94.0856462904405,6.03911006566533,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0.517875767294343,0.445326417194474,0,0,0,0,0,0.502666365318702,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.740382983530803,32.9062416066735,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,2.02063102357689,26.9096120282868,2.8946611281802,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:24420892..24420904,- | |||
}} | }} |
Latest revision as of 19:51, 5 August 2015
Short description: | p@chr13:24420892..24420904, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:24420892..24420904, - |
Coexpression cluster: | MCL_coexpression_mm9:162 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.57e-26 | 5 |
fibroblast | 1.44e-09 | 1 |
hepatic stellate cell | 1.44e-09 | 1 |
endodermal cell | 7.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 5.71e-29 | 22 |
epithelial sac | 5.71e-29 | 22 |
digestive gland | 5.71e-29 | 22 |
epithelium of foregut-midgut junction | 5.71e-29 | 22 |
anatomical boundary | 5.71e-29 | 22 |
hepatobiliary system | 5.71e-29 | 22 |
foregut-midgut junction | 5.71e-29 | 22 |
hepatic diverticulum | 5.71e-29 | 22 |
liver primordium | 5.71e-29 | 22 |
septum transversum | 5.71e-29 | 22 |
liver bud | 5.71e-29 | 22 |
digestive tract diverticulum | 1.08e-27 | 23 |
sac | 1.08e-27 | 23 |
exocrine gland | 1.93e-25 | 25 |
exocrine system | 1.93e-25 | 25 |
trunk mesenchyme | 6.74e-14 | 45 |
epithelial tube | 2.79e-13 | 47 |
abdomen element | 1.03e-12 | 49 |
abdominal segment element | 1.03e-12 | 49 |
abdominal segment of trunk | 1.03e-12 | 49 |
abdomen | 1.03e-12 | 49 |
gut epithelium | 2.95e-11 | 55 |
endocrine gland | 2.90e-10 | 60 |
mesenchyme | 4.39e-10 | 61 |
entire embryonic mesenchyme | 4.39e-10 | 61 |
gland | 2.02e-09 | 65 |
unilaminar epithelium | 2.88e-09 | 66 |
subdivision of trunk | 2.88e-09 | 66 |
endo-epithelium | 7.81e-09 | 69 |
endocrine system | 1.95e-08 | 72 |
trunk region element | 1.27e-07 | 79 |
foregut | 1.62e-07 | 80 |