FFCP PHASE1:Mm9::chr18:4353606..4353629,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=137 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_uc008dyg.1_5end | |association_with_transcript=50bp_to_uc008dyg.1_5end | ||
|cluster_id=chr18:4353606..4353629,+ | |||
|description=CAGE_peak_1_at_uc008dyg.1_5end | |description=CAGE_peak_1_at_uc008dyg.1_5end | ||
|id=chr18:4353606..4353629,+ | |id=chr18:4353606..4353629,+ | ||
|ontology_enrichment_celltype=CL:0000355!6.82e-07!9 | |ontology_enrichment_celltype=CL:0000355!6.82e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.89e-12,9;CL:0000034,9.37e-10,97;CL:0000222,1.52e-09,7;CL:0002320,8.55e-09,46;CL:0000134,8.55e-09,46;CL:0000219,3.36e-08,54;CL:0000680,4.32e-08,6;CL:0000187,4.32e-08,6;CL:0000056,4.32e-08,6;CL:0000557,8.10e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.68e-08!32;UBERON:0000383!3.25e-07!10;UBERON:0004872!4.86e-07!33;UBERON:0001134!6.82e-07!9;UBERON:0002036!6.82e-07!9;UBERON:0002385!6.82e-07!9;UBERON:0000486!6.82e-07!9;UBERON:0001015!6.82e-07!9;UBERON:0004290!6.82e-07!9;UBERON:0003082!6.82e-07!9 | |ontology_enrichment_uberon=UBERON:0002204!1.68e-08!32;UBERON:0000383!3.25e-07!10;UBERON:0004872!4.86e-07!33;UBERON:0001134!6.82e-07!9;UBERON:0002036!6.82e-07!9;UBERON:0002385!6.82e-07!9;UBERON:0000486!6.82e-07!9;UBERON:0001015!6.82e-07!9;UBERON:0004290!6.82e-07!9;UBERON:0003082!6.82e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,6.58e-13,10;UBERON:0002204,2.65e-12,32;UBERON:0001134,2.89e-12,9;UBERON:0002036,2.89e-12,9;UBERON:0002385,2.89e-12,9;UBERON:0000486,2.89e-12,9;UBERON:0007503,2.89e-12,9;UBERON:0001015,2.89e-12,9;UBERON:0002329,2.89e-12,9;UBERON:0003082,2.89e-12,9;UBERON:0003059,2.89e-12,9;UBERON:0007282,2.89e-12,9;UBERON:0004290,2.89e-12,9;UBERON:0009618,2.89e-12,9;UBERON:0007524,1.32e-09,11;UBERON:0003077,1.32e-09,11;UBERON:0007285,1.32e-09,11;UBERON:0002384,8.55e-09,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.84473233291,1.40438715793196,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,0.788655413395594,0.411343300817216,0,0.510259740906419,1.39007331681239,2.61199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69650609179052,8.5946887897618,4.71171369576418,11.1763982725893,6.83045484958446,3.88408282424923,1.76255545165808,2.63580021170738,2.75320128242522,0.782391344348039,0.436050312760893,0.219686182734472,0,0.279972843250725,1.43752564364972,0.671130424230945,0,0,2.31533492432352,6.87680255853016,1.03134418455488,0,0,0,1.69422266034566,0,3.5995988691256,1.97773272513395,1.4209602298922,1.49800055259202,2.30530983192933,0,0,0,0,0,0.122490799214954,0.191690942036473,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.151452386666368,1.5870027622425,31.0155002910795,2.58127163094416,0,0,0.649776417447669,0,0.280888840263504,2.55645483867087,2.85764605063156,4.59341446863442,0,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,3.10725460376606,0.29688427812965,0,0.304465478312141,0,0.452167921657868,0.352766121407114,0.376999773989026,1.73036477414062,0.86759614151947,0,0,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0,1.7972268675888,4.79922184794726,2.28726408731516,0.149790639404823,0.915001205637253,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0.81471491080253,0.995255764880744,0.505445516867349,1.26265113531884,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0.348252166522167,0.61734640922383,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0,0.540186184383045,0.473489471170421,0.393528463494808,0.154267112887378,0.930135779001631,0.536546802799238,0.934122738937356,0.329119699826961,1.97000956894914,1.4592385718254,1.31579988682799,2.19550115291051,2.14730270016595,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.994782360205754,0.38992817423824,0.898819408654221,0,0,0.379335801906163,0,0,0,0.387904974335251,0.350679099451593,0.252946148497029,0.885660887877613,0.470996183524124,0.493588655687202,1.1858105083486,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,1.86070473834252,0.936113019343682,0,0.896987067609561,0.482443521363367,2.21703828199926,0,0.162964976442026,0,0.704070744865506,0.335012514883631,1.19021820443007,0.780534591431195,0.788175720530955,0.221464689648775,0.637819074629948,1.63863314715738,1.38147985492716,2.16973587872267,4.52373851817817,5.98296252200581,0,0.551873492609465,0.160550589987792,0.234423373184406,0.655739781506702,1.26235463602186,0,0,0,0,0.222798674082394,0.566153061577665,0.404810701674894,0,0,0.642642632843614,1.70328102249922,0.178065603667255,0.977321756121456,1.64970122972535,0,0,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,1.36175842301515,0,0,0.214337035031592,0,0,0.164549020602121,0.913394847343798,2.58138878870081,0.847328283455281,0.882113592219848,0.49465875882444,1.61464426695906,0.422190474497091,0.596861720015682,0.492422699235184,0.582961673259701,0.741701208042039,0.854354403989263,0.412773735926445,0,0.376736914009382,0.546776910884101,0.228778173206523,2.03974115992626,2.23922323717853,2.48759952847963,0.954670618015114,0,0,0.432021363287205,0.209088296014469,0.655087691238533,0.539457385539283,0.661227645802687,0.785267825952089,0.388844919875379,1.24267862617385,0,0,0,0,0.258319646955462,0,0.352071715937262,0.5208175393758,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.15241361331,0.100826185136841,0.194915761479505,0.384847366561318,0.116876902181569,2.0405734525369,1.10992976687032,2.6017018416748,1.00730769818447,1.35232715822533,2.25218970541418,1.09890974560359,0.857473516316263,1.00314420807073,0,0.920650473014354,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0,0.543216455383447,0.561142271657738,0.237270036248348,0.29551344712669,0,0.309873682371932,0.964533054905707,0,0,1.50409737833809,1.3390183244819,0,2.08681052058379 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.84473233291,1.40438715793196,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,0.788655413395594,0.411343300817216,0,0.510259740906419,1.39007331681239,2.61199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69650609179052,8.5946887897618,4.71171369576418,11.1763982725893,6.83045484958446,3.88408282424923,1.76255545165808,2.63580021170738,2.75320128242522,0.782391344348039,0.436050312760893,0.219686182734472,0,0.279972843250725,1.43752564364972,0.671130424230945,0,0,2.31533492432352,6.87680255853016,1.03134418455488,0,0,0,1.69422266034566,0,3.5995988691256,1.97773272513395,1.4209602298922,1.49800055259202,2.30530983192933,0,0,0,0,0,0.122490799214954,0.191690942036473,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.151452386666368,1.5870027622425,31.0155002910795,2.58127163094416,0,0,0.649776417447669,0,0.280888840263504,2.55645483867087,2.85764605063156,4.59341446863442,0,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,3.10725460376606,0.29688427812965,0,0.304465478312141,0,0.452167921657868,0.352766121407114,0.376999773989026,1.73036477414062,0.86759614151947,0,0,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0,1.7972268675888,4.79922184794726,2.28726408731516,0.149790639404823,0.915001205637253,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0.81471491080253,0.995255764880744,0.505445516867349,1.26265113531884,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0.348252166522167,0.61734640922383,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0,0.540186184383045,0.473489471170421,0.393528463494808,0.154267112887378,0.930135779001631,0.536546802799238,0.934122738937356,0.329119699826961,1.97000956894914,1.4592385718254,1.31579988682799,2.19550115291051,2.14730270016595,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.994782360205754,0.38992817423824,0.898819408654221,0,0,0.379335801906163,0,0,0,0.387904974335251,0.350679099451593,0.252946148497029,0.885660887877613,0.470996183524124,0.493588655687202,1.1858105083486,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,1.86070473834252,0.936113019343682,0,0.896987067609561,0.482443521363367,2.21703828199926,0,0.162964976442026,0,0.704070744865506,0.335012514883631,1.19021820443007,0.780534591431195,0.788175720530955,0.221464689648775,0.637819074629948,1.63863314715738,1.38147985492716,2.16973587872267,4.52373851817817,5.98296252200581,0,0.551873492609465,0.160550589987792,0.234423373184406,0.655739781506702,1.26235463602186,0,0,0,0,0.222798674082394,0.566153061577665,0.404810701674894,0,0,0.642642632843614,1.70328102249922,0.178065603667255,0.977321756121456,1.64970122972535,0,0,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,1.36175842301515,0,0,0.214337035031592,0,0,0.164549020602121,0.913394847343798,2.58138878870081,0.847328283455281,0.882113592219848,0.49465875882444,1.61464426695906,0.422190474497091,0.596861720015682,0.492422699235184,0.582961673259701,0.741701208042039,0.854354403989263,0.412773735926445,0,0.376736914009382,0.546776910884101,0.228778173206523,2.03974115992626,2.23922323717853,2.48759952847963,0.954670618015114,0,0,0.432021363287205,0.209088296014469,0.655087691238533,0.539457385539283,0.661227645802687,0.785267825952089,0.388844919875379,1.24267862617385,0,0,0,0,0.258319646955462,0,0.352071715937262,0.5208175393758,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.15241361331,0.100826185136841,0.194915761479505,0.384847366561318,0.116876902181569,2.0405734525369,1.10992976687032,2.6017018416748,1.00730769818447,1.35232715822533,2.25218970541418,1.09890974560359,0.857473516316263,1.00314420807073,0,0.920650473014354,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0,0.543216455383447,0.561142271657738,0.237270036248348,0.29551344712669,0,0.309873682371932,0.964533054905707,0,0,1.50409737833809,1.3390183244819,0,2.08681052058379 | ||
|short_description=p1@uc008dyg.1 | |short_description=p1@uc008dyg.1 | ||
}} | }} |
Latest revision as of 19:32, 5 August 2015
Short description: | p1@uc008dyg.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008dyg.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | 50bp_to_uc008dyg.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.89e-12 | 9 |
stem cell | 9.37e-10 | 97 |
mesodermal cell | 1.52e-09 | 7 |
connective tissue cell | 8.55e-09 | 46 |
mesenchymal cell | 8.55e-09 | 46 |
motile cell | 3.36e-08 | 54 |
muscle precursor cell | 4.32e-08 | 6 |
muscle cell | 4.32e-08 | 6 |
myoblast | 4.32e-08 | 6 |
granulocyte monocyte progenitor cell | 8.10e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 6.58e-13 | 10 |
musculoskeletal system | 2.65e-12 | 32 |
skeletal muscle tissue | 2.89e-12 | 9 |
striated muscle tissue | 2.89e-12 | 9 |
muscle tissue | 2.89e-12 | 9 |
multilaminar epithelium | 2.89e-12 | 9 |
epithelial vesicle | 2.89e-12 | 9 |
musculature | 2.89e-12 | 9 |
somite | 2.89e-12 | 9 |
myotome | 2.89e-12 | 9 |
presomitic mesoderm | 2.89e-12 | 9 |
presumptive segmental plate | 2.89e-12 | 9 |
dermomyotome | 2.89e-12 | 9 |
trunk paraxial mesoderm | 2.89e-12 | 9 |
dense mesenchyme tissue | 1.32e-09 | 11 |
paraxial mesoderm | 1.32e-09 | 11 |
presumptive paraxial mesoderm | 1.32e-09 | 11 |
connective tissue | 8.55e-09 | 46 |